LOCUS AK055642 2059 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ31080 fis, clone HSYRA2001615, highly similar
to Calcium/calmodulin-dependent protein kinase type II delta chain
(EC 2.7.11.17).
ACCESSION AK055642
VERSION AK055642.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2059)
AUTHORS Isogai,T., Otsuki,T. and Sugiyama,T.
TITLE Direct Submission
JOURNAL Submitted (24-OCT-2001) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Tashiro,H., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Sugiyama,T., Irie,R.,
Otsuki,T., Sato,H., Wakamatsu,A., Ishii,S., Yamamoto,J., Isono,Y.,
Kawai-Hio,Y., Saito,K., Nishikawa,T., Kimura,K., Yamashita,H.,
Matsuo,K., Nakamura,Y., Sekine,M., Kikuchi,H., Kanda,K.,
Wagatsuma,M., Murakawa,K., Kanehori,K., Takahashi-Fujii,A.,
Oshima,A., Sugiyama,A., Kawakami,B., Suzuki,Y., Sugano,S.,
Nagahari,K., Masuho,Y., Nagai,K. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2001)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: RAB and HRI.
FEATURES Location/Qualifiers
source 1..2059
/cell_type="synoviocytes from rtheumatioid arthritis
(HS-RA)"
/clone="HSYRA2001615"
/clone_lib="HSYRA2"
/db_xref="H-InvDB:HIT000012256"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="primary culture, synoviocytes from rtheumatioid
arthritis"
/organism="Homo sapiens"
CDS 378..1814
/codon_start=1
/note="highly similar to Calcium/calmodulin-dependent
protein kinase type II delta chain (EC 2.7.11.17)"
/protein_id="BAG51545.1"
/translation="MASTTTCTRFTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKI
INTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDI
VAREYYSEADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGL
AIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDED
QHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPAKRITASEALKHPWICQRS
TVASMMHRQETVDCLKKFNARRKLKGAILTTMLATRNFSAAKSLLKKPDGVKESTESS
NTTIEDEDVKARKQEIIKVTEQLIEAINNGDFEAYTKICDPGLTAFEPEALGNLVEGM
DFHRFYFENALSKSNKPIHTIILNPHVHLVGDDAACIAYIRLTQYMDGSGMPKTMQSE
ETRVWHRRDGKWQNVHFHRSGSPTVPIN"
BASE COUNT 563 a 481 c 509 g 506 t
ORIGIN
1 aactgcttgc cactcgtccc gtgcctggct gtttttccat ttcccggccc cctcttcttg
61 agtactttac cccctgcatt tggggacagg gactggaaaa ggggcgggtg gagcgtccag
121 tggagaagaa ggaagcgagg cccgcaggag gaggaggatc ggcggactgt ggggaggaga
181 ccccacgcca ccctttctgg tcatctcccc tcccgccccg cccctgcgca cactccctcg
241 cgggcgagct actttcggac caggaaagta agagcggccc tgggtgacag cgccgcgggg
301 ccagtcccgg ggttagccgc gcgtctgctc gcttctggtc cgtcgcgctc ccagccaggg
361 cacagcccgg accgaggatg gcttcgacca caacctgcac caggttcacg gacgagtatc
421 agcttttcga ggagcttgga aagggggcat tctcagtggt gagaagatgt atgaaaattc
481 ctactggaca agaatatgct gccaaaatta tcaacaccaa aaagctttct gctagggatc
541 atcagaaact agaaagagaa gctagaatct gccgtctttt gaagcaccct aatattgtgc
601 gacttcatga tagcatatca gaagagggct ttcactactt ggtgtttgat ttagttactg
661 gaggtgaact gtttgaagac atagtggcaa gagaatacta cagtgaagct gatgccagtc
721 attgtataca gcagattcta gaaagtgtta atcattgtca cctaaatggc atagttcaca
781 gggacctgaa gcctgagaat ttgcttttag ctagcaaatc caagggagca gctgtgaaat
841 tggcagactt tggcttagcc atagaagttc aaggggacca gcaggcgtgg tttggttttg
901 ctggcacacc tggatatctt tctccagaag ttttacgtaa agatccttat ggaaagccag
961 tggatatgtg ggcatgtggt gtcattctct atattctact tgtggggtat ccacccttct
1021 gggatgaaga ccaacacaga ctctatcagc agatcaaggc tggagcttat gattttccat
1081 caccagaatg ggacacggtg actcctgaag ccaaagacct catcaataaa atgcttacta
1141 tcaaccctgc caaacgcatc acagcctcag aggcactgaa gcacccatgg atctgtcaac
1201 gttctactgt tgcttccatg atgcacagac aggagactgt agactgcttg aagaaattta
1261 atgctagaag aaagctaaag ggtgccatct tgacaactat gctggctaca aggaatttct
1321 cagcagccaa gagtttgttg aagaaaccag atggagtaaa ggagtcaact gagagttcaa
1381 atacaacaat tgaggatgaa gatgtgaaag cacgaaagca agagattatc aaagtcactg
1441 aacaactgat cgaagctatc aacaatgggg actttgaagc ctacacaaaa atctgtgacc
1501 caggccttac tgcttttgaa cctgaagctt tgggtaattt agtggaaggg atggattttc
1561 accgattcta ctttgaaaat gctttgtcca aaagcaataa accaatccac actattattc
1621 taaaccctca tgtacatctg gtaggggatg atgccgcctg catagcatat attaggctca
1681 cacagtacat ggatggcagt ggaatgccaa agacaatgca gtcagaagag actcgtgtgt
1741 ggcaccgccg ggatggaaag tggcagaatg ttcattttca tcgctcgggg tcaccaacag
1801 tacccatcaa ctaaatttca acagtgccac ttctgcattc tctgttctca aggcacctgg
1861 atggtgaccc tgggccgtcc tctcctcctc ttcatgcatg tttctgagtg catgaagttg
1921 tgaaggtcct acatgtaatg catatgtgat gcatcatctt atcatatatt ccttcctata
1981 cattgtttac acttcaacta cggggatgtt ccacacaaac ttaaattact gttggcaaaa
2041 caataggggg agattagac
//