LOCUS AK027609 2641 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ14703 fis, clone NT2RP3000512, highly similar
to Homeobox protein Hox-B3.
ACCESSION AK027609
VERSION AK027609.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2641)
AUTHORS Isogai,T. and Otsuki,T.
TITLE Direct Submission
JOURNAL Submitted (10-MAY-2001) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Isogai,T., Ota,T., Hayashi,K., Sugiyama,T., Otsuki,T., Suzuki,Y.,
Nishikawa,T., Nagai,K., Sugano,S., Ishibashi,T., Fujimori,K.,
Tanai,H., Kimata,M., Watanabe,M., Hiraoka,S., Ishii,S., Kawai,Y.,
Saito,K., Yamamoto,J., Wakamatsu,A., Nakamura,Y., Nagahari,K.,
Masuho,Y. and Kanehori,K.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2001)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology; cDNA library construction,
5'- & 3'-end one pass sequencing and clone selection: Helix
Research Institute (supported by Japan Key Technology Center etc.)
and Department of Virology, Institute of Medical Science,
University of Tokyo.
FEATURES Location/Qualifiers
source 1..2641
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2RP3000512"
/clone_lib="NT2RP3"
/db_xref="H-InvDB:HIT000010881"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuronal precursor cells after
2-weeks retinoic acid (RA) induction."
/organism="Homo sapiens"
CDS 897..2192
/codon_start=1
/note="highly similar to Homeobox protein Hox-B3"
/protein_id="BAG51359.1"
/translation="MQKATYYDNAAAALFGGYSSYPGSNGFGFDVPPQPPFQAATHLE
GDYQRSACSLQSLGNAAPHAKSKELNGSCMRPGLAPEPLSAPPGSPPPSAAPTSATSN
SSNGGGPSKSGPPKCGPGTNSTLTKQIFPWMKESRQTSKLKNNSPGTAEGCGGGGGGG
GGGGSGGSGGGGGGGEGGDKSPPGSAASERARTAYTSAQLVELEKEFHFNRYLCRPRR
VEMANLLNLSERQIKIWFQNRRMKYKKDQKAKGLASSSGGPSPAGSPPQPMQSTAGFM
NALHSMTPSYESPSPPAFGKAHQNAYALPSNYQPPLKGCGAPQKYPPTPAPEYEPHVL
QANGGAYGTPTMQGSPVYVGGGGYADPLPPPAGPSLYGLNHLSHHPSGNLDYNGAPPM
APSQHHGPCEPHPTYTDLSSHHAPPPQGRIQEAPKLTHL"
BASE COUNT 596 a 798 c 758 g 489 t
ORIGIN
1 ttttgcattc ctccagcttg cagctccggt agttggaggc tgggtagggc agggggaacc
61 gacaggccgg tgtccccagc cgcaaaagag ctgctgaact gtccgtttaa atgctgctgg
121 gagactcgta aaaaaatcat cgtggacctg gaggatgaga ggggcgagct ttatttcggt
181 cggattgcgg tgtggtggtt tagctgcaag gggatgccgc agccccagtt gagggggaaa
241 atagttctta aaaagcatat gcccccctaa ggaatgtctc taaagaacca aatcaaagct
301 gctctttgga aggtatgaat agaatttaaa aaaaaaagat ttctatggag cttaaagttc
361 acagccattc tgtgtagaca agagctgaga aaaatgtgag aattatacag aaaaccatta
421 atcacttctt ttctttaaat acgtatcctc tctcctttgt tattattcaa cagcaaatct
481 ccttggaccg gctgttgggg gaaaaaagtg ttagccgtct ctcccggatc tgcaaggggg
541 aaaaaatttg gaaccataaa gttgaaaact tttttctctc agtttggaag aagcccttcg
601 tcatgaatgg gatctgcaga gttcgggcga gaggaggcga gaggcgcaaa ggaggggaga
661 tttgtcgcct gccgctcgct ctggggctcg atgtgaatat atattatgtc tgcctgttct
721 cccctcgtcg gtggctaagg tcagccgctt ggaacagacc ccggaggagg ggggcagaga
781 ggggaggtgg gggggggggt ccggcgtgtc acgtgacccc cagggttgcc aatgtccggt
841 cctgagggta tcaggccttt ccaagttgcc acccactgcc caggcctcac ccagcgatgc
901 agaaagccac ctactacgac aacgccgcgg ctgctctctt cggaggctat tcctcgtacc
961 ctggcagcaa tggcttcggc ttcgatgtcc ccccccaacc cccatttcag gccgccacgc
1021 acctggaggg cgactaccag cgctcagctt gctcgctgca gtccctgggc aacgctgccc
1081 cacatgccaa gagcaaggag ctcaacggca gctgcatgag gccgggtctg gcccccgagc
1141 ccctgtcggc cccgcctggc tcacccccgc ccagtgccgc acctaccagt gccactagca
1201 acagcagtaa tgggggcggg cccagcaaaa gtggtccccc aaagtgcggt cccggcacca
1261 actccaccct caccaaacag atattcccct ggatgaaaga gtcgaggcaa acgtccaagc
1321 tgaaaaacaa ctcccccggc acagcagagg gctgtggtgg cggcggcggt ggcggcggcg
1381 gcggaggcag tggtggcagc gggggcggtg gcggcggcgg cgagggaggg gacaagagcc
1441 ccccggggtc ggcggcgtcc gagcgggcgc ggacggcgta cacgagcgcg cagctggtgg
1501 agctggagaa ggagttccat tttaaccgct acctgtgccg gcctcgccgt gtagagatgg
1561 ccaacctgct gaacctcagc gagcggcaga tcaagatctg gttccagaac cggcgcatga
1621 agtacaagaa ggaccagaag gccaagggat tggcctcgtc gtcggggggc ccatctccag
1681 ccggcagccc cccgcagccc atgcagtcca cggccggctt catgaacgcc ttacactcca
1741 tgacccccag ctacgagagc ccgtccccac ccgccttcgg taaagcccac cagaatgcct
1801 acgcgctgcc ctccaactac cagccccctc tcaaaggctg cggcgccccg cagaagtacc
1861 ctccgacccc ggcgcccgag tatgagccgc acgtcctcca agccaacggg ggcgcctacg
1921 ggacgcccac catgcagggc agtccggtgt acgtgggcgg gggcggctac gcggatccgc
1981 tgccgccccc tgccggcccc tccctctatg gcctcaacca cctttcccat cacccttccg
2041 ggaacctgga ctacaacggg gcgcccccta tggcgcccag ccagcaccac ggaccctgcg
2101 aaccccaccc cacctacaca gacctctcct ctcaccacgc gcctcctcct cagggtagaa
2161 tccaagaagc gcccaaatta acacacctgt gatgggaaag ggcgaacgag gattagggga
2221 tggggaggaa gagagagact gtggagctct ggggggcaac ctggaggtct gaaaagagga
2281 gccagagaag gtggtaccca ggcttcctgg tctgaaccgg cctggagctc cttcccttcc
2341 ccctggcctg agaggttgct tttaagtctt ccaccccttg ttccatctgc ctgccaaccc
2401 atcggaaagg aatccacatc atattggaga tgaccccatc aaccccaggg ctccagcact
2461 accaagttgg aattccacgc ccgggagtgg ggtagaggaa gacgagacag gacgaggcag
2521 aaaagcacat tttaaaaacc agacaagatg gctaggccat caccaaccaa cggacttacc
2581 ttacatcttt gtaggtaatt ccccccaaat cttgattttt ttttttcctc aattatcctt
2641 t
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