LOCUS AK023258 3692 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ13196 fis, clone NT2RP3004428, weakly similar
to CHROMODOMAIN HELICASE-DNA-BINDING PROTEIN 4.
ACCESSION AK023258
VERSION AK023258.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3692)
AUTHORS Isogai,T. and Otsuki,T.
TITLE Direct Submission
JOURNAL Submitted (23-AUG-2000) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Isogai,T., Ota,T., Hayashi,K., Sugiyama,T., Otsuki,T., Suzuki,Y.,
Nishikawa,T., Nagai,K., Sugano,S., Shiratori,A., Sudo,H.,
Wagatsuma,M., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Chiba,Y., Ishida,S., Murakawa,K.,
Ono,Y., Takiguchi,S., Watanabe,S., Kimura,K., Murakami,K.,
Ishii,S., Kawai,Y., Saito,K., Yamamoto,J., Wakamatsu,A.,
Nakamura,Y., Nagahari,K., Masuho,Y., Ninomiya,K. and Iwayanagi,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2000)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
International Trade and Industry of Japan; cDNA full insert
sequencing: Research Association for Biotechnology; cDNA library
construction, 5'- & 3'-end one pass sequencing and clone
selection: Helix Research Institute (supported by Japan Key
Technology Center etc.) and Department of Virology, Institute of
Medical Science, University of Tokyo.
FEATURES Location/Qualifiers
source 1..3692
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2RP3004428"
/clone_lib="NT2RP3"
/db_xref="H-InvDB:HIT000006532"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuronal precursor cells after
2-weeks retinoic acid (RA) induction."
/organism="Homo sapiens"
CDS 386..2290
/codon_start=1
/protein_id="BAB14492.1"
/translation="MELQTLQEALKVEIQVHQKLVAQMKQDPQNADLKKQLHELQAKI
TALSEKQKRVVEQLRKNLIVKQEQPDKFQIQPLPQSENKLQTAQQQPLQQLQQQQQYH
HHHAQQSAAASPNLTASQKTVTTASMITTKTLPLVLKAATATMPASVVGQRPTIAMVT
AINSQKAVLSTDVQNTPVNLQTSSKVTGPGAEAVQIVAKNTVTLQVQATPPQPIKVPQ
FIPPPRLTPRPNFLPQVRPKPVAQNNIPIAPAPPPMLAAPQLIQRPVMLTKFTPTTLP
TSQNSIHPVRVVNGQTATIAKTFPMAQLTSIVIATPGTRLAGPQTVQLSKPSLEKQTV
KSHTETDEKQTESHTITPPAAPKPKREENPQKLAFMVSLGLVTHDHLEEIQSKRQERK
RRTTANPVYSGAVFEPERKKSAVTYLNSTMHPGTRKRANEEHWPKGDIHEDFCSVCRK
SGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQDQMLKKEEAIPWPGTLAIVHS
YIAYKAAKEEEKQKLLKWSSDLKQEREQLEQKVKQLSNSISKCMEMKNTILARQKEMH
SSLEKVKQLIRLIHGIDLSKPVDSEATVGAISNGPDCTPPANAATSTPAPSPSSQSCT
ANCNQGEETK"
BASE COUNT 1092 a 907 c 866 g 827 t
ORIGIN
1 ggtgaatggg ctggtggtgc tcgctgctgc tgctgagagg aggaggagga tgaagagttg
61 ggcttgtttg tctcctcctc ctcctgcttc ccctgctcag agttcctgcc tccagctgcc
121 aggggggaca gccagccagc agcaggaggg gggctagaga gctgaaggag agccagtttc
181 cccaaaattg gacttctcag aacctttaat atgctaatgt gcattgtgaa tctccaagag
241 ggggatatga tatgcagcat tcttgaatac ttctaatgac agggagccca ctacctcata
301 agctgcagtg agaagaggag tttgttactt taaacagagg ctgaagaaac tatagaatta
361 gcagagaaag tggagaaggt agaggatgga gttgcagact ctacaggagg ctcttaaagt
421 ggaaattcag gttcaccaga aactggttgc tcaaatgaag caggatccac agaatgctga
481 cttaaagaaa cagcttcatg aactccaagc caaaatcaca gctttgagtg agaaacagaa
541 aagagtagtt gaacagctac ggaagaacct gatagtaaag caagaacaac cggacaagtt
601 ccaaatacag ccattgccac aatctgaaaa caaactacaa acagcacagc agcaaccact
661 acagcaacta caacaacagc agcagtacca ccaccaccac gcccagcagt cagctgcagc
721 ctctcccaac ctgactgctt cacagaagac tgtaactaca gcttctatga ttaccacaaa
781 gacactacct ctcgtcttga aagcagcaac tgcgaccatg cctgcctctg tggtgggcca
841 gagacctacc attgctatgg tgaccgccat caacagtcag aaggctgtgc tcagcactga
901 tgtgcagaac acaccagtca acctccagac gtctagtaag gtcactgggc ctggggcaga
961 ggctgtccaa attgtggcaa aaaacacagt cactctgcag gttcaggcaa cacctcctca
1021 gcccatcaaa gtaccacagt ttatcccccc tcctagactc actccacgtc caaactttct
1081 tccacaggtt cgacccaagc ctgtggccca gaataacatt cctattgccc cagcaccacc
1141 tcccatgctc gcagctcctc agcttatcca gaggcccgtc atgctgacca agttcacccc
1201 cacaaccctt cccacatccc agaattccat ccaccccgtc cgtgtcgtca atgggcagac
1261 tgcaaccata gccaaaacgt tccccatggc ccagctcacc agcattgtga tagctactcc
1321 agggaccaga ctcgctggac ctcaaactgt acagcttagc aagccaagtc ttgaaaaaca
1381 gacagttaaa tctcacacag aaacagatga gaaacaaaca gagagccaca ccatcacccc
1441 acctgctgca cccaaaccaa aacgggagga gaaccctcag aaacttgcct tcatggtgtc
1501 tctagggttg gtaacacatg accatctaga agaaatccaa agcaagaggc aagagcgaaa
1561 aagaagaaca acagcaaatc cggtctacag tggagcagtc tttgagccag agcgtaagaa
1621 gagtgcagtg acatacctaa acagcacaat gcaccctggg acccggaaga gagccaatga
1681 ggaacactgg ccaaagggtg atattcatga ggatttttgc agcgtttgca gaaaaagtgg
1741 ccagttactg atgtgcgaca cgtgttcccg tgtatatcat ttggactgct tagacccccc
1801 tctgaaaaca attcccaagg gcatgtggat ctgtcccaga tgtcaggacc agatgctgaa
1861 gaaggaagaa gcaattccat ggcctggaac tttagcaatt gttcattcct atattgccta
1921 caaagcagca aaagaagaag agaaacagaa gttacttaaa tggagttcag atttaaaaca
1981 agaacgagaa caactagagc aaaaggtgaa acagctcagc aattccataa gtaaatgcat
2041 ggaaatgaag aacaccatcc tggcccggca gaaggagatg cacagctccc tggagaaggt
2101 aaaacagctg attcgcctca tccacggcat cgacctctcc aaacctgtag actctgaggc
2161 cactgtgggg gccatctcca atggcccgga ctgcaccccc cctgccaatg ccgccacctc
2221 cacgccggcc ccttccccct cctcccagag ctgcacagcg aactgtaacc agggggaaga
2281 gactaaataa cagagcccct ctaggagaag ccacgggatc ccggcggcaa ggagaacaga
2341 acactgaaga ctctagaaaa gcaaagccgg atttctggaa agtgcagaat tcttttggtt
2401 ctttggttcc agagagagag aagatgcttg tgccaggtgg caccagagtt tgccaattga
2461 tccttcttat tctgtgtgta catgcaaaga ttggaccatg ttacatgaaa tagtgccagc
2521 tggaggttct ttgccagcac catgccaagt gaaataatat atttactctc tctattatac
2581 accagtgtgt gcctgcagca gcctccacag ccacgatggg tttgtttctg ttttcttggg
2641 tggggagcag ggacgggcgg agggaggaga gcaggtttca gatccttact tgccgagccg
2701 tttgtttagg tagagaagac aagtccaaag agtgtgtggg ctttcctgtt tctaaacttt
2761 cgctactata aaaccaaaaa aaggaattga gatttcacca accccagtgc ccagaagagg
2821 gaaggggagt ggctggaggg agcagggggt gggacagtgt atcaaataag cagtatttaa
2881 tcacctctgg cgggggcctc gtgcaagggg agactgacac caagaacagc cagtaggttc
2941 ttctcccctg cactctgctc cctgcgcggt aaccccacca ctcctgaagc ctgcccagtc
3001 tccttccttc cctgcttggt gagtcgcgca tctccgtggt tatcccgctg tctcctctcc
3061 aagaacaagc agagcccggg ccactggccc ttgcccaagg cagggaagaa ggatgtgtgt
3121 gtccaggaag gaaaaaaagg tggatcagtg attttacttg aaaacaagct ccatcccttt
3181 tctatattta taagaagaga agatcttgag tgaagcagca cgcgacccag gtgtgtgtga
3241 attgaatgga gacgtttctt ttctctttct ttaatttttg tttttgttct ttttttcttt
3301 aaggaaagtt ttattttact gttcatttta ctttcttggt aacaaaaact aaaataagga
3361 atagaaaagc tgtttttcag gctgacagtc caattaaggg tagccaagac cttgcatggt
3421 agagtaggaa tcatagtgtc agtgaggtcc cgtgagtctt tgtgagtcct tgtgtcatcg
3481 ttcgggcact gtttttttat gcaagggcaa aaatctttgt atctggggaa aaaaaacttt
3541 tttttaaatt aaaaaggaaa ataaaagata ttgaggtctt cctagtgtta cttaaattaa
3601 gatcaaggta agaaacattg taaaaaaaaa ttacaaaagt gctatttgtt tcctaaaaac
3661 agtgatttct attaaaaagg tgtcagaact gg
//