LOCUS AK001532 1418 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ10670 fis, clone NT2RP2006312, highly similar
to SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily Emember 1.
ACCESSION AK001532
VERSION AK001532.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1418)
AUTHORS Isogai,T. and Otsuki,T.
TITLE Direct Submission
JOURNAL Submitted (16-FEB-2000) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Isogai,T., Ota,T., Hayashi,K., Sugiyama,T., Otsuki,T., Suzuki,Y.,
Nishikawa,T., Nagai,K., Sugano,S., Ishibashi,T., Fujimori,K.,
Tanai,H., Kimata,M., Watanabe,M., Hiraoka,S., Ishii,S., Kawai,Y.,
Saito,K., Yamamoto,J., Wakamatsu,A., Nakamura,Y., Nagahari,K.,
Masuho,Y. and Kanehori,K.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2000)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
International Trade and Industry of Japan; cDNA full insert
sequencing: Research Association for Biotechnology; cDNA library
construction, 5'- & 3'-end one pass sequencing and clone
selection: Helix Research Institute (supported by Japan Key
Technology Center etc.) and Department of Virology, Institute of
Medical Science, University of Tokyo.
FEATURES Location/Qualifiers
source 1..1418
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2RP2006312"
/clone_lib="NT2RP2"
/db_xref="H-InvDB:HIT000004006"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuronal precursor cells after
2-weeks retinoic acid (RA) induction."
/organism="Homo sapiens"
CDS 122..1357
/codon_start=1
/note="highly similar to SWI/SNF-related
matrix-associated actin-dependent regulator of chromatin
subfamily Emember 1"
/protein_id="BAG50933.1"
/translation="MSKRPSYAPPPTPAPATQMPSTPGFVGYNPYSHLAYNNYRLGGN
PGTNSRVTASSGITIPKPPKPPDKPLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGG
MWRDLTDEEKQEYLNEYEAEKIEYNESMKAYHNSPAYLAYINAKSRAEAALEEESRQR
QSRMEKGEPYMSIQPAEDPDDYDDGFSMKHTATARFQRNHRLISEILSESVVPDVRSV
VTTARMQVLKRQVQSLMVHQRKLEAELLQIEERHQEKKRKFLESTDSFNNELKRLCGL
KVEVDMEKIAAEIAQAEEQARKRQEEREKEAAEQAERSQSSIVPEEEQAANKGEEKKD
DENIPMETEETHLEETTESQQNGEEGTSTPEDKESGQEGVDSMAEEGTSDSNTGSESN
SATVEEPPTDPIPEDEKKE"
BASE COUNT 465 a 309 c 379 g 265 t
ORIGIN
1 ccggacgcga ggggcggggc gagcgcggga caaagggaag cgaagccgga gctgcgggcg
61 ctttttctgc ccgcggtgtc tcagattcat tcttaaggaa ctgagaactt aatcttccaa
121 aatgtcaaaa agaccatctt atgccccacc tcccacccca gctcctgcaa cacaaatgcc
181 cagcacacca gggtttgtgg gatacaatcc atacagtcat ctcgcctaca acaactacag
241 gctgggaggg aacccgggca ccaacagccg ggtcacggca tcctctggta tcacgattcc
301 aaaaccccca aagccaccag ataagccgct gatgccctac atgaggtaca gcagaaaggt
361 ctgggaccaa gtaaaggctt ccaaccctga cctaaagttg tgggagattg gcaagattat
421 tggtggcatg tggcgagatc tcactgatga agaaaaacaa gaatatttaa acgaatacga
481 agcagaaaag atagagtaca atgaatctat gaaggcctat cataattccc ccgcgtacct
541 tgcttacata aatgcaaaaa gtcgtgcaga agctgcttta gaggaagaaa gtcgacagag
601 acaatctcgc atggagaaag gagaaccgta catgagcatt cagcctgctg aagatccaga
661 tgattatgat gatggctttt caatgaagca tacagccacc gcccgtttcc agagaaacca
721 ccgcctcatc agtgaaattc ttagtgagag tgtggtgcca gacgttcggt cagttgtcac
781 aacagctaga atgcaggtcc tcaaacggca ggtccagtcc ttaatggttc atcagcgaaa
841 actagaagct gaacttcttc aaatagagga acgacaccag gagaagaaga ggaaattcct
901 ggaaagcaca gattcattta acaatgagct taaaaggttg tgcggtctga aagtagaagt
961 ggatatggag aaaattgcag ctgagattgc acaggcagag gaacaggccc gcaaaaggca
1021 ggaggaaagg gagaaggagg ccgcagagca agctgagcgc agtcagagca gcatcgttcc
1081 tgaggaagaa caagcagcta acaaaggcga ggagaagaaa gacgacgaga acattccgat
1141 ggagacagag gagacacacc ttgaagaaac aacagagagc caacagaatg gtgaagaagg
1201 cacgtctact cctgaggaca aggagagtgg gcaggagggg gtcgacagta tggcagagga
1261 aggaaccagt gatagtaaca ctggctcgga gagcaacagt gcaacagtgg aggagccacc
1321 aacagatccc ataccagaag atgagaaaaa agaataagtg ttgccttgtt ttgtgtgttc
1381 taaatacttt ttttaatgaa aaaatgtttt ttggtttt
//