LOCUS AK001411 2414 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ10549 fis, clone NT2RP2001976, moderately
similar to Mus musculus calmodulin-binding protein SHA1 mRNA.
ACCESSION AK001411
VERSION AK001411.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2414)
AUTHORS Isogai,T. and Otsuki,T.
TITLE Direct Submission
JOURNAL Submitted (16-FEB-2000) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Isogai,T., Ota,T., Hayashi,K., Sugiyama,T., Otsuki,T., Suzuki,Y.,
Nishikawa,T., Nagai,K., Sugano,S., Takahashi-Fujii,A., Hara,H.,
Tanase,T., Nomura,Y., Togiya,S., Komai,F., Hara,R., Takeuchi,K.,
Arita,M., Nabekura,T., Ishii,S., Kawai,Y., Saito,K., Yamamoto,J.,
Wakamatsu,A., Nakamura,Y., Nagahari,K., Masuho,Y. and Oshima,A.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2000)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
International Trade and Industry of Japan; cDNA full insert
sequencing: Research Association for Biotechnology; cDNA library
construction, 5'- & 3'-end one pass sequencing and clone
selection: Helix Research Institute (supported by Japan Key
Technology Center etc.) and Department of Virology, Institute of
Medical Science, University of Tokyo.
FEATURES Location/Qualifiers
source 1..2414
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2RP2001976"
/clone_lib="NT2RP2"
/db_xref="H-InvDB:HIT000003885"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuronal precursor cells after
2-weeks retinoic acid (RA) induction."
/organism="Homo sapiens"
CDS 38..2218
/codon_start=1
/protein_id="BAA91676.1"
/translation="MKVRQKLKNVSEEKMAAIVNQSALCCYRSKTQYEAVQSEGVMIQ
EWYKASGLACSQEAEYHSQSRAAVTIQKAFCRMVTRKLETQKCAALRIQFFLQMAVYR
RRFVQQKRAAITLQHYFRTWQTRKQFLLYRKAAVVLQNHYRAFLSAKHQRQVYLQIRS
SVIIIQARSKGFIQKRKFQEIKNSTIKIQAMWRRYRAKKYLCKVKAACKIQAWYRCWR
AHKEYLAVLKAVKIIQGCFYTKLERTRFLNVRASAIIIQRKWRAILPAKIAHEHFLMI
KRHRAACLIQAHYRGYKGRQVSLRQKSAALIIQKYIRAREAGKHERIKYIEFKKSTVI
LQALVRGWLVRKRFLEQRAKIRLLHFTAAAYYHLNAVRIQRAYKLYLAVKNANKQVNS
VICIQRWFRARLQEKRFIQKYHSIKKIEHEGQECLSQRNRAASVIQKAVRHFLLRKKQ
EKFTSGIIKIQALWRGYSWRKKNDCTKIKAIRLSLQVVNREIREENKLYKRTALALHY
LLTYKHLSAILEALKHLEVVTRLSPLCCENMAQSGAISKIFVLIRSCNRSIPCMEVIR
YAVQVLLNVSKYEKTTSAVYDVENCIDILLELLQIYREKPGNKVADKGGSIFTKTCCL
LAILLKTTNRASDVRSRSKVVDRIYSLYKLTAHKHKMNTERILYKQKKNSSISIPFIP
ETPVRTRIVSRLKPDWVLRRDNMEEITNPLQAIQMVMDTLGIPY"
BASE COUNT 859 a 391 c 476 g 688 t
ORIGIN
1 gaaatctgta cgaactattc aggctgcttt tagaggcatg aaagttagac aaaaattgaa
61 aaatgtatca gaggaaaaga tggcagccat tgttaaccaa tctgcactct gctgttacag
121 aagcaaaact cagtatgaag ctgttcaaag tgaaggtgtt atgattcaag agtggtataa
181 agcttctggc cttgcttgtt cacaggaagc agagtatcat tctcaaagta gggctgcagt
241 aacaattcaa aaagcttttt gtagaatggt cacaagaaaa ctggaaacac agaaatgtgc
301 tgccctacgg attcagttct tccttcagat ggctgtgtat cggagaagat ttgttcagca
361 gaaaagagct gctatcactt tacagcatta ttttaggacg tggcaaacca gaaaacagtt
421 tttactatat agaaaagcag cagtggtttt acaaaatcac tacagagcat ttctgtctgc
481 aaaacatcaa agacaagtct atttacagat cagaagcagt gttatcatta ttcaagctag
541 aagtaaagga tttatacaga aacggaagtt tcaggaaatt aaaaatagca ccataaaaat
601 tcaggctatg tggaggagat atagagccaa gaaatattta tgtaaagtga aagctgcctg
661 caagattcaa gcctggtata gatgttggag agcacacaaa gaatatctag ctgtattaaa
721 agctgttaaa attattcaag gttgcttcta taccaaacta gagagaacac ggtttttgaa
781 tgtgagagca tcagcaatta tcattcagag aaaatggaga gctatacttc ctgcaaagat
841 agctcatgaa cacttcttaa tgataaaaag acatcgagct gcttgtttga tccaagcaca
901 ttatagagga tataaaggaa ggcaggtctc tcttcggcag aaatctgctg ctttgatcat
961 acaaaaatat atacgagcca gggaggctgg aaagcatgaa aggataaaat atattgaatt
1021 taaaaaatct acagttatcc tacaagcact ggtgcgtggt tggctagtac gaaaaagatt
1081 tttagaacag agagccaaaa ttcgacttct tcacttcact gcagctgcat attatcacct
1141 gaatgctgtt agaattcaaa gagcctataa actttacctg gctgtgaaga atgctaacaa
1201 gcaggttaat tcagtcatct gtattcagag atggtttcga gcaagattac aagaaaagag
1261 atttattcag aaatatcata gcatcaaaaa gattgagcat gaaggtcaag aatgtctgag
1321 ccagcgaaat agggctgcat cagtaataca gaaagcagtg cgccattttc tcctccgtaa
1381 aaagcaggaa aaattcacta gtggaatcat taaaattcag gcattatgga gaggctattc
1441 ttggaggaag aaaaatgatt gtacaaaaat taaagctata cgactaagtc ttcaagttgt
1501 taatagggag attcgagaag aaaacaaact ctacaaaaga actgcacttg cacttcatta
1561 ccttttgaca tataagcacc tttctgccat tcttgaggcc ttaaaacacc tagaggtagt
1621 tactagattg tctccacttt gttgtgagaa catggcccag agtggagcaa tttctaaaat
1681 atttgttttg atccgaagtt gtaatcgcag tattccttgt atggaagtca tcagatatgc
1741 tgtgcaagtc ttgcttaatg tatctaagta tgagaaaact acttcagcag tttatgatgt
1801 agaaaattgt atagatatac tattggagct tttgcagata taccgagaaa agcctggtaa
1861 taaagttgca gacaaaggcg gaagcatttt tacaaaaact tgttgtttgt tggctatttt
1921 actgaagaca acaaatagag cctctgatgt acgaagtagg tccaaagttg ttgaccgtat
1981 ttacagtctc tacaaactta cagctcataa acataaaatg aatactgaaa gaatacttta
2041 caagcaaaag aagaattctt ctataagcat tccttttatc ccagaaacac ctgtaaggac
2101 cagaatagtt tcaagactta agccagattg ggttttgaga agagataaca tggaagaaat
2161 cacaaatccc ctgcaagcta ttcaaatggt gatggatacg cttggcattc cttattagta
2221 aatgtaaaca ttttcagtat gtatagtgta aagaaatatt aaagccaatc atgagtacgt
2281 aaagtgattt ttgctctctg tgtacaactt ttaaaatctg actttgtttt aaaaaaacat
2341 aaactgttca ttacattctt catttttatc atttatagtt ttatgcatgt aataaactaa
2401 tatgtcataa gatg
//