LOCUS AB621804 4136 bp mRNA linear HUM 24-AUG-2011
DEFINITION Homo sapiens AGL mRNA for glycogen debranching enzyme, partial
cds, clone: HP05268-RBb08E09.
ACCESSION AB621804
VERSION AB621804.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4136)
AUTHORS Kato,S.
TITLE Direct Submission
JOURNAL Submitted (25-MAR-2011) to the DDBJ/EMBL/GenBank databases.
Contact:Seishi Kato
National Rehabilitation Center for Persons with Disabilities,
Research Institute, Department of Rehabilitation Engineering; 4-1
Namiki, Tokorozawa, Saitama 359-8555, Japan
URL :http://www.rehab.go.jp/
REFERENCE 2
AUTHORS Oshikawa,M., Tsutsui,C., Ikegami,T., Fuchida,Y., Matsubara,M.,
Toyama,S., Usami,R., Ohtoko,K. and Kato,S.
TITLE Full-Length Transcriptome Analysis of Human Retina-Derived Cell
Lines ARPE-19 and Y79 Using the Vector-Capping Method
JOURNAL Invest. Ophthalmol. Vis. Sci. 52, 6662-6670 (2011)
COMMENT For cDNA clones and library availability, please contact
RIKEN BioResource Center.
E-mail: dnabank@brc.riken.jp
URL:http://dna.brc.riken.jp/
FEATURES Location/Qualifiers
source 1..4136
/cell_line="Y79"
/cell_type="retinoblastoma"
/clone="HP05268-RBb08E09"
/clone_lib="pKA1U5/Y79 cDNA"
/db_xref="H-InvDB:HIT000660480"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="The 5'-end sequence of the full-length cDNA clone.
The 3'-end sequence has not yet been determined."
/organism="Homo sapiens"
CDS 349..>4136
/codon_start=1
/gene="AGL"
/product="glycogen debranching enzyme"
/protein_id="BAK64140.1"
/transl_table=1
/translation="MGHSKQIRILLLNEMEKLEKTLFRLEQGYELQFRLGPTLQGKAV
TVYTNYPFPGETFNREKFRSLDWENPTEREDDSDKYCKLNLQQSGSFQYYFLQGNEKS
GGGYIVVDPILRVGADNHVLPLDCVTLQTFLAKCLGPFDEWESRLRVAKESGYNMIHF
TPLQTLGLSRSCYSLANQLELNPDFSRPNRKYTWNDVGQLVEKLKKEWNVICITDVVY
NHTAANSKWIQEHPECAYNLVNSPHLKPAWVLDRALWRFSCDVAEGKYKEKGIPALIE
NDHHMNSIRKIIWEDIFPKLKLWEFFQVDVNKAVEQFRRLLTQENRRVTKSDPNQHLT
IIQDPEYRRFGCTVDMNIALTTFIPHDKGPAAIEECCNWFHKRMEELNSEKHRLINYH
QEQAVNCLLGNVFYERLAGHGPKLGPVTRKHPLVTRYFTFPFEEIDFSMEESMIHLPN
KACFLMAHNGWVMGDDPLRNFAEPGSEVYLRRELICWGDSVKLRYGNKPEDCPYLWAH
MKKYTEITATYFQGVRLDNCHSTPLHVAEYMLDAARNLQPNLYVVAELFTGSEDLDNV
FVTRLGISSLIREAMSAYNSHEEGRLVYRYGGEPVGSFVQPCLRPLMPAIAHALFMDI
THDNECPIVHRSAYDALPSTTIVSMACCASGSTRGYDELVPHQISVVSEERFYTKWNP
EALPSNTGEVNFQSGIIAARCAISKLHQELGAKGFIQVYVDQVDEDIVAVTRHSPSIH
QSVVAVSRTAFRNPKTSFYSKEVPQMCIPGKIEEVVLEARTIERNTKPYRKDENSING
TPDITVEIREHIQLNESKIVKQAGVATKGPNEYIQEIEFENLSPGSVIIFRVSLDPHA
QVAVGILRNHLTQFSPHFKSGSLAVDNADPILKIPFASLASRLTLAELNQILYRCESE
EKEDGGGCYDIPNWSALKYAGLQGLMSVLAEIRPKNDLGHPFCNNLRSGDWMIDYVSN
RLISRSGTIAEVGKWLQAMFFYLKQIPRYLIPCYFDAILIGAYTTLLDTAWKQMSSFV
QNGSTFVKHLSLGSVQLCGVGKFPSLPILSPALMDVPYRLNEITKEKEQCCVSLAAGL
PHFSSGIFRCWGRDTFIALRGILLITGRYVEARNIILAFAGTLRHGLIPNLLGEGIYA
RYNCRDAVWWWLQCIQDYCKMVPNGLDILKCPVSRMYPTDDSAPLPAGTLDQPLFEVI
QEAMQKHMQGIQFRERNAGPQIDRNMKDEGFNITAGVDEETGFVYGGNRFNCGTWMDK
"
BASE COUNT 1210 a 822 c 920 g 1184 t
ORIGIN
1 acggccaggt tgggtaccgg gtgcgcccag gaacccgcgc gaggcgaagt cgctgagact
61 ctgcctgctt ctcacccagc tgcctcggcg ctgccccggt cgctcgccgc ccctcccttt
121 gcccttcacg gcgcccggcc ctccttgggc tgcggcttct gtgcgaggct gggcagccag
181 cccttcccct tctgtttctc cccgtcccct ccccccgacc gtagcaccag agtcgcgggt
241 cctgcagtgc cccagaagcc gcacgtataa ctccctcggc gggtaactca ttcgactgtg
301 gagttctttt aattcttatg aaagatttca aatcctctgg aagccaaaat gggacacagt
361 aaacagattc gaattttact tctgaacgaa atggagaaac tggaaaagac cctcttcaga
421 cttgaacaag ggtatgagct acagttccga ttaggcccaa ctttacaggg aaaagcagtt
481 accgtgtata caaattaccc atttcctgga gaaacattta atagagaaaa attccgttct
541 ctggattggg aaaatccaac agaaagagaa gatgattctg ataaatactg taaacttaat
601 ctgcaacaat ctggttcatt tcagtattat ttccttcaag gaaatgagaa aagtggtgga
661 ggttacatag ttgtggaccc cattttacgt gttggtgctg ataatcatgt gctacccttg
721 gactgtgtta ctcttcagac atttttagct aagtgtttgg gaccttttga tgaatgggaa
781 agcagactta gggttgcaaa agaatcaggc tacaacatga ttcattttac cccattgcag
841 actcttggac tatctaggtc atgctactcc cttgccaatc agttagaatt aaatcctgac
901 ttttcaagac ctaatagaaa gtatacctgg aatgatgttg gacagctagt ggaaaaatta
961 aaaaaggaat ggaatgttat ttgtattact gatgttgtct acaatcatac tgctgctaat
1021 agtaaatgga tccaggaaca tccagaatgt gcctataatc ttgtgaattc tccacactta
1081 aaacctgcct gggtcttaga cagagcactt tggcgtttct cctgtgatgt tgcagaaggg
1141 aaatacaaag aaaagggaat acctgctttg attgaaaatg atcaccatat gaattccatc
1201 cgaaaaataa tttgggagga tatttttcca aagcttaaac tttgggaatt tttccaagta
1261 gatgtcaaca aagcggttga gcaatttaga agacttctta cacaagaaaa taggcgagta
1321 accaagtctg atccaaacca acaccttacg attattcaag atcctgaata cagacggttt
1381 ggctgtactg tagatatgaa cattgcacta acgactttca taccacatga caaggggcca
1441 gcagcaattg aagaatgctg taattggttt cataaaagaa tggaggaatt aaattcagag
1501 aagcatcgac tcattaacta tcatcaggaa caggcagtta attgcctttt gggaaatgtg
1561 ttttatgaac gactggctgg ccatggtcca aaactaggac ctgtcactag aaagcatcct
1621 ttagttacca ggtattttac tttcccattt gaagagatag acttctccat ggaagaatct
1681 atgattcatc tgccaaataa agcttgtttt ctgatggcac acaatggatg ggtaatggga
1741 gatgatcctc ttcgaaactt tgctgaaccg ggttcagaag tttacctaag gagagaactt
1801 atttgctggg gagacagtgt taaattacgc tatgggaata aaccagagga ctgtccttat
1861 ctctgggcac acatgaaaaa atacactgaa ataactgcaa cttatttcca gggagtacgt
1921 cttgataact gccactcaac acctcttcac gtagctgagt acatgttgga tgctgctagg
1981 aatttgcaac ccaatttata tgtagtagct gaactgttca caggaagtga agatctggac
2041 aatgtctttg ttactagact gggcattagt tccttaataa gagaggcaat gagtgcatat
2101 aatagtcatg aagagggcag attagtttac cgatatggag gagaacctgt tggatccttt
2161 gttcagccct gtttgaggcc tttaatgcca gctattgcac atgccctgtt tatggatatt
2221 acgcatgata atgagtgtcc tattgtgcat agatcagcgt atgatgctct tccaagtact
2281 acaattgttt ctatggcatg ttgtgctagt ggaagtacaa gaggctatga tgaattagtg
2341 cctcatcaga tttcagtggt ttctgaagaa cggttttaca ctaagtggaa tcctgaagca
2401 ttgccttcaa acacaggtga agttaatttc caaagcggca ttattgcagc caggtgtgct
2461 atcagtaaac ttcatcagga gcttggagcc aagggtttta ttcaggtgta tgtggatcaa
2521 gttgatgaag acatagtggc agtaacaaga cactcaccta gcatccatca gtctgttgtg
2581 gctgtatcta gaactgcttt caggaatccc aagacttcat tttacagcaa ggaagtgcct
2641 caaatgtgca tccctggcaa aattgaagaa gtagttcttg aagctagaac tattgagaga
2701 aacacgaaac cttataggaa ggatgagaat tcaatcaatg gaacaccaga tatcacagta
2761 gaaattagag aacatattca gcttaatgaa agtaaaattg ttaaacaagc tggagttgcc
2821 acaaaagggc ccaatgaata tattcaagaa atagaatttg aaaacttgtc tccaggaagt
2881 gttattatat tcagagttag tcttgatcca catgcacaag tcgctgttgg aattcttcga
2941 aatcatctga cacaattcag tcctcacttt aaatctggca gcctagctgt tgacaatgca
3001 gatcctatat taaaaattcc ttttgcttct cttgcctcca gattaacttt ggctgagcta
3061 aatcagatcc tttaccgatg tgaatcagaa gaaaaggaag atggtggagg gtgctatgac
3121 ataccaaact ggtcagccct taaatatgca ggtcttcaag gtttaatgtc tgtattggca
3181 gaaataagac caaagaatga cttggggcat cctttttgta ataatttgag atctggagat
3241 tggatgattg actatgtcag taaccggctt atttcacgat caggaactat tgctgaagtt
3301 ggtaaatggt tgcaggctat gttcttctac ctgaagcaga tcccacgtta ccttatccca
3361 tgttactttg atgctatatt aattggtgca tataccactc ttctggatac agcatggaag
3421 cagatgtcaa gctttgttca gaatggttca acctttgtga aacacctttc attgggttca
3481 gttcaactgt gtggagtagg aaaattccct tccctgccaa ttctttcacc tgccctaatg
3541 gatgtacctt ataggttaaa tgagatcaca aaagaaaagg agcaatgttg tgtttctcta
3601 gctgcaggct tacctcattt ttcttctggt attttccgct gctggggaag ggatactttt
3661 attgcactta gaggtatact gctgattact ggacgctatg tagaagccag gaatattatt
3721 ttagcatttg cgggtaccct gaggcatggt ctcattccta atctactggg tgaaggaatt
3781 tatgccagat acaattgtcg ggatgctgtg tggtggtggc tgcagtgtat ccaggattac
3841 tgtaaaatgg ttccaaatgg tctagacatt ctcaagtgcc cagtttccag aatgtatcct
3901 acagatgatt ctgctccttt gcctgctggc acactggatc agccattgtt tgaagtcata
3961 caggaagcaa tgcaaaaaca catgcagggc atacagttcc gagaaaggaa tgctggtccc
4021 cagatagatc gaaacatgaa ggacgaaggt tttaatataa ctgcaggagt tgatgaagaa
4081 acaggatttg tttatggagg aaatcgtttc aattgtggca catggatgga taaaat
//