LOCUS AB191262 7791 bp mRNA linear HUM 24-AUG-2011
DEFINITION Homo sapiens SPTAN1 mRNA for non-erythrocytic spectrin alpha,
complete cds.
ACCESSION AB191262
VERSION AB191262.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 7791)
AUTHORS Kato,S.
TITLE Direct Submission
JOURNAL Submitted (27-SEP-2004) to the DDBJ/EMBL/GenBank databases.
Contact:Seishi Kato
National Rehabilitation Center for Persons with Disabilities,
Research Institute, Department of Rehabilitation Engineering; 4-1
Namiki, Tokorozawa, Saitama 359-8555, Japan
REFERENCE 2
AUTHORS Kato,S., Ohtoko,K., Ohtake,H. and Kimura,T.
TITLE Vector-Capping: A Simple Method for Preparing a High-Quality
Full-Length cDNA Library
JOURNAL DNA Res. 12, 53-62 (2005)
COMMENT For cDNA clones and library availability, please contact
RIKEN BioResource Center.
E-mail: dnabank@brc.riken.jp
URL:http://dna.brc.riken.jp/
FEATURES Location/Qualifiers
source 1..7791
/cell_line="ARPE-19"
/cell_type="retinal pigment epithelium"
/clone="ARe45C02"
/clone_lib="pKA1U5/ARPE-19 cDNA"
/db_xref="H-InvDB:HIT000242558"
/db_xref="taxon:9606"
/mol_type="mRNA"
/organism="Homo sapiens"
CDS 108..7466
/codon_start=1
/gene="SPTAN1"
/note="splicing variant"
/product="non-erythrocytic spectrin alpha"
/protein_id="BAD52438.1"
/transl_table=1
/translation="MDPSGVKVLETAEDIQERRQQVLDRYHRFKELSTLRRQKLEDSY
RFQFFQRDAEELEKWIQEKLQIASDENYKDPTNLQGKLQKHQAFEAEVQANSGAIVKL
DETGNLMISEGHFASETIRTRLMELHRQWELLLEKMREKGIKLLQAQKLVQYLRECED
VMDWINDKEAIVTSEELGQDLEHVEVLQKKFEEFQTDMAAHEERVNEVNQFAAKLIQE
QHPEEELIKTKQDEVNAAWQRLKGLALQRQGKLFGAAEVQRFNRDVDETISWIKEKEQ
LMASDDFGRDLASVQALLRKHEGLERDLAALEDKVKALCAEADRLQQSHPLSATQIQV
KREELITNWEQIRTLAAERHARLNDSYRLQRFLADFRDLTSWVTEMKALINADELASD
VAGAEALLDRHQEHKGEIDAHEDSFKSADESGQALLAAGHYASDEVREKLTVLSEERA
ALLELWELRRQQYEQCMDLQLFYRDTEQVDNWMSKQEAFLLNEDLGDSLDSVEALLKK
HEDFEKSLSAQEEKITALDEFATKLIQNNHYAMEDVATRRDALLSRRNALHERAMRRR
AQLADSFHLQQFFRDSDELKSWVNEKMKTATDEAYKDPSNLQGKVQKHQAFEAELSAN
QSRIDALEKAGQKLIDVNHYAKDEVAARMNEVISLWKKLLEATELKGIKLREANQQQQ
FNRNVEDIELWLYEVEGHLASDDYGKDLTNVQNLQKKHALLEADVAAHQDRIDGITIQ
ARQFQDAGHFDAENIKKKQEALVARYEALKEPMVARKQKLADSLRLQQLFRDVEDEET
WIREKEPIAASTNRGKDLIGVQNLLKKHQALQAEIAGHEPRIKAVTQKGNAMVEEGHF
AAEDVKAKLHELNQKWEALKAKASQRRQDLEDSLQAQQYFADANEAESWMREKEPIVG
STDYGKDEDSAEALLKKHEALMSDLSAYGSSIQALREQAQSCRQQVAPTDDETGKELV
LALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYVKKLDPAQSA
SRENLLEEQGSIALRQEQIDNQYHSLLELGEKRKGMLEKSCKKFMLFREANELQQWIN
EKEAALTSEEVGADLEQVEVLQKKFDDFQKDLKANESRLKDINKVAEDLESEGLMAEE
VQAVQQQEVYGMMPRDETDSKTASPWKSARLMVHTVATFNSIKELNERWRSLQQLAEE
RSQLLGSAHEVQRFHRDADETKEWIEEKNQALNTDNYGHDLASVQALQRKHEGFERDL
AALGDKVNSLGETAERLIQSHPESAEDLQEKCTELNQAWSSLGKRADQRKAKLGDSHD
LQRFLSDFRDLMSWINGIRGLVSSDELAKDVTGAEALLERHQEHRTEIDARAGTFQAF
EQFGQQLLAHGHYASPEIKQKLDILDQERADLEKAWVQRRMMLDQCLELQLFHRDCEQ
AENWMAAREAFLNTEDKGDSLDSVEALIKKHEDFDKAINVQEEKIAALQAFADQLIAA
GHYAKGDISSRRNEVLDRWRRLKAQMIEKRSKLGESQTLQQFSRDVDEIEAWISEKLQ
TASDESYKDPTNIQSKHQKHQAFEAELHANADRIRGVIDMGNSLIERGACAGSEDAVK
ARLAALADQWQFLVQKSAEKSQKLKEANKQQNFNTGIKDFDFWLSEVEALLASEDYGK
DLASVNNLLKKHQLLEADISAHEDRLKDLNSQADSLMTSSAFDTSQVKDKRDTINGRF
QKIKSMAASRRAKLNESHRLHQFFRDMDDEESWIKEKKLLVGSEDYGRDLTGVQNLRK
KHKRLEAELAAHEPAIQGVLDTGKKLSDDNTIGKEEIQQRLAQFVEHWKELKQLAAAR
GQRLEESLEYQQFVANVEEEEAWINEKMTLVASEDYGDTLAAIQGLLKKHEAFETDFT
VHKDRVNDVCTNGQDLIKKNNHHEENISSKMKGLNGKVSDLEKAAAQRKAKLDENSAF
LQFNWKADVVESWIGEKENSLKTDDYGRDLSSVQTLLTKQETFDAGLQAFQQEGIANI
TALKDQLLAAKHVQSKAIEARHASLMKRWSQLLANSAARKKKLLEAQSHFRKVEDLFL
TFAKKASAFNSWFENAEEDLTDPVRCNSLEEIKALREAHDAFRSSLSSAQADFNQLAE
LDRQIKSFRVASNPYTWFTMEALEETWRNLQKIIKERELELQKEQRRQEENDKLRQEF
AQHANAFHQWIQETRTYLLDGSCMVEESGTLESQLEATKRKHQEIRAMRSQLKKIEDL
GAAMEEALILDNKYTEHSTVGLAQQWDQLDQLGMRMQHNLEQQIQARNTTGVTEEALK
EFSMMFKHFDKDKSGRLNHQEFKSCLRSLGYDLPMVEEGEPDPEFEAILDTVDPNRDG
HVSLQEYMAFMISRETENVKSSEEIESAFRALSSEGKPYVTKEELYQNLTREQADYCV
SHMKPYVDGKGRELPTAFDYVEFTRSLFVN"
BASE COUNT 2144 a 1941 c 2224 g 1482 t
ORIGIN
1 acccgctgcg gagtgaacgg tgtggagcgg aggccgcgga ggctcctcgg tccttcagca
61 cccctcggcc cgacgcaccc acgcccctca ccccccgaga gccgaaaatg gacccaagtg
121 gggtcaaagt gctggaaaca gcagaggaca tccaggagag gcggcagcag gtcctagacc
181 gataccaccg cttcaaggaa ctctcaaccc ttaggcgtca gaagctggaa gattcctatc
241 gattccagtt ctttcaaaga gatgctgaag agctggagaa atggatacag gaaaaacttc
301 agattgcatc tgatgagaat tataaagacc caaccaactt gcagggaaag cttcagaagc
361 atcaagcatt tgaagctgaa gtgcaggcca actcaggagc cattgttaag ctggatgaaa
421 ctggaaacct gatgatctca gaagggcatt ttgcatctga aaccatacgg acccgtttga
481 tggagctgca ccgccagtgg gaattacttt tggagaagat gcgagaaaaa ggaatcaaac
541 tgctgcaggc ccagaagttg gtgcagtact tacgagaatg tgaggacgtg atggactgga
601 tcaatgacaa ggaagcaatt gttacttctg aagagctggg ccaggatctg gagcatgtag
661 aggttttaca gaagaaattt gaagagtttc aaacagatat ggctgctcat gaagaaagag
721 ttaatgaagt gaaccagttt gctgccaaac tcatacagga gcagcaccct gaggaggaac
781 tgatcaagac taagcaggat gaagtcaatg cagcctggca gcggctgaag ggcctggctc
841 tgcagaggca ggggaagctc tttggggcag cagaagttca gcgctttaac agggatgtgg
901 atgagactat cagttggatt aaggaaaagg agcagttaat ggcctctgat gattttggcc
961 gagacctggc aagtgttcag gctctgcttc ggaagcacga gggtctggag agagatcttg
1021 ctgctctaga agacaaggtc aaagccctgt gtgctgaggc tgaccgcctg caacagtccc
1081 accctctgag tgcaacacag attcaagtga agcgagagga actgattaca aactgggagc
1141 agatccgcac cttggcggca gagagacatg cacggctcaa tgattcatac aggcttcaac
1201 gcttccttgc tgacttccgt gacctcacca gctgggtgac tgagatgaaa gccctcatca
1261 atgcagatga gcttgccagt gatgtggctg gggctgaagc cctgctagat agacaccaag
1321 agcacaaggg tgaaattgat gcccatgaag acagcttcaa atctgcagat gaatctggac
1381 aggcactgct tgctgctggt cactatgcct cagatgaagt gagggagaag ctgaccgtcc
1441 tttccgagga gagagcggcg ctgctggagc tgtgggagct gcgcaggcag cagtacgagc
1501 agtgcatgga cctgcagctc ttctaccggg acactgagca ggtggacaac tggatgagca
1561 agcaggaggc gttcctgttg aatgaagact tgggagattc cttggatagt gtggaagcgc
1621 ttcttaagaa gcacgaagac tttgagaaat cccttagtgc ccaggaggaa aagattacag
1681 cattagatga atttgcaacc aagctaattc agaacaacca ctatgcaatg gaagatgtgg
1741 ccactcgccg agatgctctg ttgagccgcc gcaatgccct tcacgagaga gccatgcgtc
1801 gccgggccca gctagccgat tctttccatc tgcagcagtt tttccgtgat tctgatgagc
1861 tcaagagttg ggtcaatgag aagatgaaaa ctgccacaga tgaagcttat aaagatccat
1921 ccaacctaca aggaaaagta cagaagcatc aggcttttga ggctgagctc tcagcaaacc
1981 agagccgaat tgatgccttg gagaaagctg gccaaaagct gattgatgtc aaccactatg
2041 ccaaggatga agtggcagct cgtatgaatg aggtgatcag tttgtggaag aaactgctag
2101 aggccactga actgaaagga ataaagcttc gtgaagccaa ccagcaacag caatttaatc
2161 gcaatgttga ggatattgaa ttgtggctat atgaagtaga aggtcacttg gcttcggatg
2221 attacggcaa agatcttacc aatgtgcaga acctccagaa gaaacatgcc ctgctagagg
2281 cagatgtggc tgctcaccag gaccgaattg atggcatcac cattcaggcc cgccagttcc
2341 aagatgctgg ccattttgat gcagaaaaca tcaagaagaa acaggaagcc ctcgtggctc
2401 gctatgaggc actcaaggag cccatggttg cccggaagca gaagctggcc gattctctgc
2461 ggttgcagca gctcttccgg gatgttgagg atgaggagac gtggattcga gagaaagagc
2521 ccattgccgc atctaccaac agaggtaagg atttaattgg ggtccagaat ctgctaaaga
2581 aacatcaagc cttacaagca gaaattgctg gacatgaacc acgcatcaaa gcagttacac
2641 agaaggggaa tgccatggtg gaggaaggcc attttgctgc agaggatgtg aaggccaagc
2701 ttcacgagct gaaccaaaag tgggaggcac tgaaagccaa agcttcccag cgtcggcagg
2761 acctggagga ctctctgcag gcccagcagt actttgctga tgctaacgag gctgaatcct
2821 ggatgcggga gaaggaaccc attgtgggca gcactgacta tggcaaggac gaagactctg
2881 ctgaggctct actgaagaaa cacgaagctt tgatgtcaga tctcagtgcc tacggcagca
2941 gcatccaggc tttgcgagaa caagcacagt cctgccggca acaagtggcc cccacggatg
3001 atgagactgg gaaggagctg gtcttggctc tctacgacta tcaggagaag agtccccgag
3061 aggtcaccat gaagaaggga gatatcctta ccttactcaa cagcaccaac aaggattggt
3121 ggaaagtgga agtgaacgat cgtcagggtt ttgtgccggc tgcgtacgtg aagaaattgg
3181 accccgccca gtcagcctcc cgggagaatc tcctggagga gcaaggcagc atagcactgc
3241 ggcaggagca gattgacaat caatatcatt ctctgctgga actgggtgag aagcgtaaag
3301 gcatgttgga gaagagttgc aagaagttta tgttgttccg tgaagcgaat gaactacagc
3361 aatggatcaa tgagaaggaa gccgctctga caagtgagga ggtcggagca gacttggagc
3421 aggttgaggt gctccagaag aagtttgatg acttccagaa ggacctgaag gccaatgagt
3481 cacggttgaa ggacattaac aaggtagctg aagacctgga gtctgaaggt ctcatggcag
3541 aggaggtgca ggctgtgcaa caacaggaag tgtatggcat gatgcccagg gatgaaactg
3601 attccaagac agcctccccg tggaagtctg ctcgtctgat ggttcacacc gtggccacct
3661 ttaattccat caaggagctg aatgagcgct ggcggtccct acagcagctg gccgaggaac
3721 ggagccagct cttgggcagc gcccatgaag tacagaggtt ccacagagat gctgatgaaa
3781 ccaaagaatg gattgaagag aagaatcaag ctctaaacac agacaattat ggacatgatc
3841 tcgccagtgt ccaggccctg caacgcaagc atgagggctt cgagagggac cttgcggctc
3901 tcggtgacaa ggtaaactcc cttggtgaaa cagcagagcg cctgatccag tcccatcccg
3961 agtcagcaga agacctgcag gaaaagtgca cagagttaaa ccaggcctgg agcagcctgg
4021 ggaaacgtgc agatcagcgc aaggcaaagt tgggtgactc ccacgacctg cagcgcttcc
4081 ttagcgattt ccgggacctc atgtcttgga tcaatggaat acgggggttg gtgtcctcag
4141 atgagctagc caaggatgtc accggagctg aggcattgct ggagcgacac caggaacacc
4201 ggacagaaat cgatgccagg gctggcactt tccaggcatt tgagcagttt ggacagcagc
4261 tgttggctca cggacactat gccagccctg agatcaagca gaaacttgat attcttgacc
4321 aggagcgtgc agacctggag aaggcctggg ttcagcgcag gatgatgctg gatcagtgcc
4381 ttgaactgca gctgttccat cgggactgtg agcaagctga gaactggatg gctgcccggg
4441 aggccttctt gaataccgaa gacaaaggag actcactgga cagcgtagag gctctgatca
4501 aaaaacatga agactttgac aaagcgatta acgtccagga agagaagatt gctgctctgc
4561 aggcctttgc cgaccagctc atcgctgccg gccattatgc caagggagac atttctagcc
4621 ggcgcaatga ggtcttggac aggtggcgac gtctgaaagc ccagatgatt gagaaaaggt
4681 caaagctagg agaatctcaa accctccaac agttcagccg ggatgtggat gagattgagg
4741 cttggatcag tgaaaaattg caaacagcga gtgatgagtc gtacaaggat cccaccaaca
4801 tccagagcaa gcaccagaag caccaggctt ttgaagcaga gctgcatgcc aacgctgacc
4861 ggatccgtgg ggttatcgac atgggcaact ccctcattga acgtggagcc tgtgccggca
4921 gtgaggatgc tgtcaaggcc cgcctggctg ccttagctga ccagtggcag ttcttggtgc
4981 aaaagtcagc ggaaaagagc cagaaactga aagaagccaa caagcagcag aacttcaaca
5041 cagggatcaa ggactttgac ttctggctgt ctgaggtgga ggccctgctg gcatccgaag
5101 attatggcaa agacctggct tctgtgaaca acctgctgaa aaagcatcaa ctgctggaag
5161 cagatatatc tgcccatgag gatcgcctga aggacctgaa cagccaggca gacagcctga
5221 tgaccagcag tgccttcgac acctcccaag taaaggacaa gagggacacc atcaacgggc
5281 gcttccagaa gatcaagagc atggcggcct cccggcgagc caagctgaat gaatcccatc
5341 gcctgcacca gttcttccgg gacatggatg acgaggagtc ctggatcaag gagaagaagc
5401 tgctggtggg ctcagaggac tacggccggg acctaaccgg cgtgcagaac ctgaggaaga
5461 agcacaagcg gctggaagca gaactggctg cgcatgagcc ggctattcag ggtgtcctgg
5521 acactggcaa gaagctgtcc gatgacaaca ccatcgggaa agaggagatc cagcagcggc
5581 tggcgcagtt tgtggagcac tggaaagagc tgaagcagct ggcagctgcc cggggtcagc
5641 ggctggaaga gtccttggaa tatcagcagt ttgtagccaa tgtggaagag gaagaagcct
5701 ggatcaatga gaaaatgacc ctggtggcca gcgaagatta tggcgacact cttgccgcca
5761 tccagggctt actgaagaaa catgaagctt ttgagacaga cttcaccgtc cacaaggatc
5821 gcgtgaatga tgtctgcacc aatggacaag acctcattaa gaagaacaat caccatgagg
5881 agaacatctc ttcaaagatg aagggcctga acgggaaagt gtcagacctg gagaaagctg
5941 cagcccagag aaaggcgaag ctggatgaga actcggcctt ccttcagttc aactggaagg
6001 cggacgtggt ggagtcctgg atcggtgaaa aggagaacag cttgaagaca gatgattatg
6061 gccgagacct gtcttctgtg cagacgctcc tcaccaaaca ggaaactttt gacgctgggc
6121 tgcaggcctt ccagcaggaa ggcattgcca acatcactgc cctcaaagat cagcttctcg
6181 ccgccaaaca cgttcagtcc aaggccatcg aggcccggca cgcctccctc atgaagaggt
6241 ggagccagct tctggccaac tcagccgccc gcaagaagaa gcttctggag gctcagagtc
6301 acttccgcaa ggtggaggac ctcttcctga ccttcgccaa aaaggcttct gccttcaaca
6361 gctggtttga aaatgcagag gaggacttaa cagaccccgt gcgctgcaac tccttggaag
6421 aaatcaaagc tttgcgcgag gcccacgacg ccttccgctc ctccctcagc tctgcccagg
6481 ctgacttcaa ccagctggcc gagctggacc gccagatcaa gagcttccgc gtagcctcca
6541 acccctacac ctggtttacc atggaggccc tggaggagac ctggaggaac ctacagaaaa
6601 tcatcaagga gagggagctg gagctgcaga aggaacagcg gcggcaggag gagaacgaca
6661 agctgcgcca ggagtttgcc cagcacgcca acgccttcca ccagtggatc caagagacca
6721 ggacatacct cctcgatggg tcctgtatgg tggaagagtc ggggaccctc gaatcccagc
6781 ttgaagctac caaacgcaag caccaggaaa tccgagccat gagaagtcag ctcaaaaaga
6841 tcgaggacct gggggccgcc atggaggagg ccctcatcct ggacaacaag tacacggagc
6901 acagcaccgt gggcctcgcc cagcagtggg accagctgga ccagctgggc atgcgcatgc
6961 agcacaacct ggagcagcag atccaggcca ggaacacaac aggtgtgact gaggaggccc
7021 tcaaagaatt cagcatgatg tttaaacact ttgacaagga caagtctggc aggctgaacc
7081 atcaggagtt caaatcttgc ctgcgctccc tgggctatga cctgcccatg gtggaggaag
7141 gggaacctga ccctgagttc gaggcaatcc tggacacggt ggatccgaac agagatggcc
7201 atgtctcctt gcaagaatac atggctttca tgatcagccg cgaaactgag aacgtcaagt
7261 ccagcgagga gattgagagc gccttccggg ccctcagctc agagggaaag ccttacgtga
7321 ccaaggagga gctctaccag aacctgaccc gggaacaagc cgactactgc gtctcccaca
7381 tgaagcccta cgtggacggc aagggccgcg agctccccac cgcgttcgac tacgtggagt
7441 tcacccgctc gcttttcgtg aactgagcca ctccctgggt cacccacccc tcgctgcttg
7501 ccctgcgtcg ccttgctgca tgtccgctcc tctgtgtgct ctcactttcc actgtaacct
7561 taagcctgct tagcttggaa taagacttag gagaaaatgg tgcttcacta acccgcttcc
7621 agtccagtca caatcatcat gtcactgtgg ggacccagat ctgtgtcttg aagcagctgc
7681 cctcattccg acttcagaaa atcgaagcag ctggctcctc cccttgttct ctctcccacc
7741 ctcccccaaa tctgttttca tgtaaaagac aaataaatga tgacttcccc c
//