LOCUS Z47362 1165 bp mRNA linear HUM 07-OCT-2008 DEFINITION H.sapiens TCF-1 mRNA for T cell factor 1 splice form E. ACCESSION Z47362 VERSION Z47362.1 KEYWORDS splice form E; T cell factor 1. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1165) AUTHORS Mayer K., Wolff E., Clevers H., Ballhausen W.G. TITLE The human high mobility group (HMG)-box transcription factor TCF-1: novel isoforms due to alternative splicing and usage of a new exon IXA. JOURNAL Unpublished. REFERENCE 2 (bases 1 to 1165) AUTHORS van de Wetering M., Oosterwegel M., Holstege F., Dooyes D., Suijkerbuijk R., Geurts van Kessel A., Clevers H. TITLE The human T Cell Transcription Factor-1 Gene JOURNAL J Biol Chem 267(12), 8530-8536(1992). PUBMED 1569101 REFERENCE 3 (bases 1 to 1165) AUTHORS Ballhausen W.G. JOURNAL Submitted (06-JAN-1995) to the INSDC. Ballhausen W. G., Institut fuer Humangenetik der Universitaet, Universitaet Erlangen-Nuernberg, Schwabachanlage 10, Erlangen, Germany, D-91054 FEATURES Location/Qualifiers source 1..1165 /db_xref="H-InvDB:HIT000327374" /organism="Homo sapiens" /mol_type="mRNA" /cell_line="Jurkat" /cell_type="T-lymophocyte" /tissue_type="lymphoma" /db_xref="taxon:9606" mRNA 1..1165 /gene="TCF-1" /standard_name="T cell factor 1 splice form E" /function="high mobility group box transcription factor" /citation=[1] /experiment="experimental evidence, no additional details recorded" CDS 2..1144 /codon_start=1 /gene="TCF-1" /standard_name="T cell factor 1 splice form E" /product="T cell factor 1 splice form E" /db_xref="GOA:P36402" /db_xref="H-InvDB:HIT000327374.12" /db_xref="HGNC:HGNC:11639" /db_xref="InterPro:IPR009071" /db_xref="InterPro:IPR013558" /db_xref="InterPro:IPR024940" /db_xref="InterPro:IPR027397" /db_xref="InterPro:IPR028785" /db_xref="InterPro:IPR036910" /db_xref="UniProtKB/Swiss-Prot:P36402" /citation=[1] /protein_id="CAA87440.1" /translation="MYKETVYSAFNLLMHYPPPSGAGQHPQPQPPLHKANQPPHGVPQ LSLYEHFNSPHPTPAPADISQKQVHRPLQTPDLSGFYSLTSGSMGQLPHTVSWFTHPS LMLGSGVPGHPAAIPHPAIVPPSGKQELQPFDRNLKTQAESKAEKEAKKPTIKKPLNA FMLYMKEMRAKVIAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLY PGWSARDNYGKKKRRSREKHQESTTDPGSPKKCRARFGLNQQTDWCGPCRRKKKCIRY LPGEGRCPSPVPSDDSALGCPGSPAPQDSPSYHLLPRFPTELLTSPAERHLHPQVSPL LSASQPQGPHRPPAAPCRAHRYSNRNLRDRWPSRHRTPGRLQEPTP" mat_peptide 805..1141 /note="alternative ORF specific for TCF-1E" BASE COUNT 279 a 422 c 286 g 178 t ORIGIN 1 catgtacaaa gagaccgtct actccgcctt caatctgctc atgcattacc cacccccctc 61 gggagcaggg cagcaccccc agccgcagcc cccgctgcac aaggccaatc agccccccca 121 cggtgtcccc caactctctc tctacgaaca tttcaacagc ccacatccca cccctgcacc 181 tgcggacatc agccagaagc aagttcacag gcctctgcag acccctgacc tctctggctt 241 ctactccctg acctcaggca gcatggggca gctcccccac actgtgagct ggttcaccca 301 cccatccttg atgctaggtt ctggtgtacc tggtcaccca gcagccatcc cccacccggc 361 cattgtgccc ccctcaggga agcaggagct gcagcccttc gaccgcaacc tgaagacaca 421 agcagagtcc aaggcagaga aggaggccaa gaagccaacc atcaagaagc ccctcaatgc 481 cttcatgctg tacatgaagg agatgagagc caaggtcatt gcagagtgca cacttaagga 541 gagcgctgcc atcaaccaga tcctgggccg caggtggcac gcgctgtcgc gagaagagca 601 ggccaagtac tatgagctgg cccgcaagga gaggcagctg cacatgcagc tatacccagg 661 ctggtcagcg cgggacaact acgggaagaa gaagaggcgg tcgagggaaa agcaccaaga 721 atccaccaca gaccctggct cgcctaagaa atgccgtgct cgctttggcc tcaaccagca 781 gacggattgg tgtggtccgt gcaggaggaa aaagaaatgc attcggtact tacccggaga 841 aggccgctgc cccagccccg ttccttccga tgacagtgct ctaggctgcc ccgggtcccc 901 agctccccag gactcaccct cataccatct gctgccccgc ttccccacag aactgcttac 961 tagccctgcg gagcggcacc tacatcccca ggtctctcca ctgctctcag cctcccaacc 1021 ccagggcccc cacaggcccc ccgcagcacc ctgcagagca cacaggtaca gcaacaggaa 1081 tctcagagac aggtggccta gcaggcacag gacacctggc cgcctccagg agcctacccc 1141 ctgaaaatga cagagaccca gatct //