LOCUS Z21488 3360 bp mRNA linear HUM 18-APR-2005
DEFINITION H.sapiens contactin mRNA,.
ACCESSION Z21488
VERSION Z21488.1
KEYWORDS cell adhesion molecule; contactin.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3360)
AUTHORS Reid R.A., Hemperly J.J.
TITLE Identification and Characterization of the Human Cell Adhesion
Molecule Contactin
JOURNAL Brain Res. 21, 1-8(1994).
REFERENCE 2 (bases 1 to 3360)
AUTHORS Reid R.
JOURNAL Submitted (22-JAN-1993) to the INSDC. Reid R., Becton Dickinson and
Company, 21 Davis Drive, Research Triangle Park, North Carolina,
U.S.A
FEATURES Location/Qualifiers
source 1..3360
/db_xref="H-InvDB:HIT000326613"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
5'UTR 10..121
sig_peptide 122..181
CDS 122..3178
/product="contactin"
/db_xref="GOA:Q12860"
/db_xref="H-InvDB:HIT000326613.13"
/db_xref="HGNC:HGNC:2171"
/db_xref="InterPro:IPR003598"
/db_xref="InterPro:IPR003599"
/db_xref="InterPro:IPR003961"
/db_xref="InterPro:IPR007110"
/db_xref="InterPro:IPR013098"
/db_xref="InterPro:IPR013783"
/db_xref="InterPro:IPR036116"
/db_xref="InterPro:IPR036179"
/db_xref="InterPro:IPR036992"
/db_xref="PDB:2EE2"
/db_xref="PDB:3S97"
/db_xref="UniProtKB/Swiss-Prot:Q12860"
/protein_id="CAA79696.1"
/translation="MKMWLLVSHLVIISITTCLAEFTWYRRYGHGVSEEDKGFGPIFE
EQPINTIYPEESLEGKVSLNCRARASPFPVYKWRMNNGDVDLTSDRYSMVGGNLVINN
PDKQKDAGIYYCLASNNYGMVRSTEATLSFGYLDPFPPEERPEVRVKEGKGMVLLCDP
PYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSI
TKSVFSKFIPLIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWR
KVLEPMPSTAEISTSGAVLKIFNIQLEDEGIYECEAENIRGKDKHQARIYVQAFPEWV
EHINDTEVDIGSDLYWPCVATGKPIPTIRWLKNGYAYHKGELRLYDVTFENAGMYQCI
AENTYGAIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSK
GTEWLVNSSRILIWEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVITDPTRII
LAPINADITVGENATMQCAASFDPALDLTFVWSFNGYVIDFNKENIHYQRNFMLDSNG
ELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGLRIEDIRATSVALTW
SRGSDNHSPISKYTIQTKTILSDDWKDAKTDPPIIEGNMEAARAVDLIPWMEYEFRVV
ATNTLGRGEPSIPSNRIKTDGAAPNVAPSDVGGGGGRNRELTITWAPLSREYHYGNNF
GYIVAFKPFDGEEWKKVTVTNPDTGRYVHKDETMSPSTAFQVKVKAFNNKGDGPYSLL
AVINSAQDAPSEAPTEVGVKVLSSSEISVHWEHVLEKIVESYQIRYWAAHDKEEAANR
VQVTSQEYSARLENLLPDTQYFIEVGACNSAGCGPPSDMIEAFTKKAPPSQPPRIISS
VRSGSRYIITWDHVVALSNESTVTGYKVLYRPDGQHDGKLYSTHKHSIEVPIPRDGEY
VVEVRAHSDGGDGVVSQVKISGAPTLSPSLLGLLLPAFGILVYLEF"
mat_peptide 182..3175
/product="contactin"
3'UTR 3176..3360
regulatory 3281..3286
/regulatory_class="polyA_signal_sequence"
BASE COUNT 1036 a 713 c 758 g 853 t
ORIGIN
1 gaattccggc tgtgccgcac cgaggcgagc aggagcaggg aacaggtgtt taaaattatc
61 caactgccat agagctaaat tcttttttgg aaaattgaac cgaacttcta ctgaatacaa
121 gatgaaaatg tggttgctgg tcagtcatct tgtgataata tctattacta cctgtttagc
181 agagtttaca tggtatagaa gatatggtca tggagtttct gaggaagaca aaggatttgg
241 accaattttt gaagagcagc caatcaatac catttatcca gaggaatcac tggaaggaaa
301 agtctcactc aactgtaggg cacgagccag ccctttcccg gtttacaaat ggagaatgaa
361 taatggggac gttgatctca caagtgatcg atacagtatg gtaggaggaa accttgttat
421 caacaaccct gacaaacaga aagatgctgg aatatactac tgtttagcat ctaataacta
481 cgggatggtc agaagcactg aagcaaccct gagctttgga tatcttgatc ctttcccacc
541 tgaggaacgt cctgaggtca gagtaaaaga agggaaagga atggtgcttc tctgtgaccc
601 cccataccat tttccagatg atcttagcta tcgctggctt ctaaatgaat ttcctgtatt
661 tatcacaatg gataaacggc gatttgtgtc tcagacaaat ggcaatctct acattgcaaa
721 tgttgaggct tccgacaaag gcaattattc ctgctttgtt tccagtcctt ctattacaaa
781 gagcgtgttc agcaaattca tcccactcat tccaatacct gaacgaacaa caaaaccata
841 tcctgctgat attgtagttc agttcaagga tgtatatgca ttgatgggcc aaaatgtgac
901 cttagaatgt tttgcacttg gaaatcctgt tccggatatc cgatggcgga aggttctaga
961 accaatgcca agcactgctg agattagcac ctctggggct gttcttaaga tcttcaatat
1021 tcagctagaa gatgaaggca tctatgaatg tgaggctgag aacattagag gaaaggataa
1081 acatcaagca agaatttatg ttcaagcatt ccctgagtgg gtagaacaca tcaatgacac
1141 agaggtggac ataggcagtg atctctactg gccttgtgtg gccacaggaa agcccatccc
1201 tacaatccga tggttgaaaa atggatatgc gtatcataaa ggggaattaa gactgtatga
1261 tgtgactttt gaaaatgccg gaatgtatca gtgcatagct gaaaacacat atggagccat
1321 ttatgcaaat gctgagttga agatcttggc gttggctcca acttttgaaa tgaatcctat
1381 gaagaaaaag atcctggctg ctaaaggtgg aagggtgata attgaatgca aacctaaagc
1441 tgcaccgaaa ccaaagtttt catggagtaa agggacagag tggcttgtca atagcagcag
1501 aatactcatt tgggaagatg gtagcttgga aatcaacaac attacaagga atgatggagg
1561 tatctataca tgctttgcag aaaataacag agggaaagct aatagcactg gaacccttgt
1621 tatcacagat cctacgcgaa ttatattggc cccaattaat gccgatatca cagttggaga
1681 aaacgccacc atgcagtgtg ctgcgtcctt tgatcctgcc ttggatctca catttgtttg
1741 gtccttcaat ggctatgtga tcgattttaa caaagagaat attcactacc agaggaattt
1801 tatgctggat tccaatgggg aattactaat ccgaaatgcg cagctgaaac atgctggaag
1861 atacacatgc actgcccaga caattgtgga caattcttca gcttcagctg accttgtagt
1921 gagaggccct ccaggccctc caggtggtct gagaatagaa gacattagag ccacttctgt
1981 ggcacttact tggagccgtg gttcagacaa tcatagtcct atttctaaat acactatcca
2041 gaccaagact attctttcag atgactggaa agatgcaaag acagatcccc caattattga
2101 aggaaatatg gaggcagcaa gagcagtgga cttaatccca tggatggagt atgaattccg
2161 cgtggtagca accaatacac tgggtagagg agagcccagt ataccatcta acagaattaa
2221 aacagacggt gctgcaccaa atgtggctcc ttcagatgta ggaggtggag gtggaagaaa
2281 cagagagctg accataacat gggcgccttt gtcaagagaa taccactatg gcaacaattt
2341 tggttacata gtggcattta agccatttga tggagaagaa tggaaaaaag tcacagttac
2401 taatcctgat actggccgat atgtccataa agatgaaacc atgagccctt ccactgcatt
2461 tcaagttaaa gtcaaggcct tcaacaacaa aggagatgga ccttacagcc tactagcagt
2521 cattaattca gcacaagacg ctcccagtga agccccaaca gaagtaggtg taaaagtctt
2581 atcatcttct gagatatctg ttcattggga acatgtttta gaaaaaatag tggaaagcta
2641 tcagattcgg tattgggctg cccatgacaa agaagaagct gcaaacagag ttcaagtcac
2701 cagccaagag tactcggcca ggctcgagaa ccttctgcca gacacccagt attttataga
2761 agtcggggcc tgcaatagtg cagggtgtgg acctccaagt gacatgattg aggctttcac
2821 caagaaagca cctcctagcc agcctccaag gatcatcagt tcagtaaggt ctggttcacg
2881 ctatataatc acctgggatc atgtcgttgc actatcaaat gaatctacag tgacgggata
2941 taaggtactc tacagacctg atggccagca tgatggcaag ctgtattcaa ctcacaaaca
3001 ctccatagaa gtcccaatcc ccagagatgg agaatacgtt gtggaggttc gcgcgcacag
3061 tgatggagga gatggagtgg tgtctcaagt caaaatttca ggtgcaccca ccctatcccc
3121 aagtcttctc ggcttactgc tgcctgcctt tggcatcctt gtctacttgg aattctgaat
3181 gtgttgtgac agctgctgtt cccatcccag ctcagaagac acccttcaac cctgggatga
3241 ccacaattcc ttccaatttc tgcggctcca tcctaagcca aataaattat actttaacaa
3301 actattcaac tgatttacaa cacacatgat gactgaggca ttcaggaacc ccttcatcca
//