LOCUS Y17108 1559 bp mRNA linear HUM 07-OCT-2008
DEFINITION Homo sapiens mRNA for rhomboid-related protein, complete CDS.
ACCESSION Y17108
VERSION Y17108.1
KEYWORDS rhomboid.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 2 (bases 1 to 1559)
AUTHORS Pascall J.C.
JOURNAL Submitted (06-APR-1998) to the INSDC. J.C. Pascall, The Babraham
Hall, The Babraham Inst., Cambridge, CB2 4AT, UK
REFERENCE 3
AUTHORS Pascall J.C., Brown K.D.
TITLE Characterization of a mammalian cDNA encoding a protein with high
sequence similarity to the Drosophila regulatory protein Rhomboid
JOURNAL FEBS Lett. 429(3), 337-340(1998).
PUBMED 9662444
COMMENT Related sequence: Z92544
FEATURES Location/Qualifiers
source 1..1559
/db_xref="H-InvDB:HIT000325973"
/organism="Homo sapiens"
/chromosome="16"
/map="p13.3"
/mol_type="mRNA"
/dev_stage="adult"
/clone_lib="Marathon cDNA library (Clontech)"
/cell_line="HL-60"
/db_xref="taxon:9606"
CDS 28..1344
/product="rhomboid-related protein"
/db_xref="GOA:O75783"
/db_xref="H-InvDB:HIT000325973.11"
/db_xref="HGNC:HGNC:10007"
/db_xref="InterPro:IPR011992"
/db_xref="InterPro:IPR017213"
/db_xref="InterPro:IPR022764"
/db_xref="InterPro:IPR035952"
/db_xref="UniProtKB/Swiss-Prot:O75783"
/protein_id="CAA76629.1"
/translation="MGRVEDGGTTEELEDWDPGTSALPAPGIKQGPREQTGTGPLSQK
CWEPEPDAPSQPGPALWSRGRARTQALAGGSSLQQLDPENTGFIGADTFTGLVHSHEL
PLDPAKLDMLVALAQSNEQGQVCYQELVDLISSKRSSSFKRAIANGQRALPRDGPLDE
PGLGVYKRFVRYVAYEILPCEVDRRWYFYRHRSCPPPVFMASVTLAQIIVFLCYGARL
NKWVLQTYHPEYMKSPLVYHPGHRARAWRFLTYMFMHVGLEQLGFNALLQLMIGVPLE
MVHGLLRISLLYLAGVLAGSLTVSITDMRAPVVGGSGGVYALCSAHLANVVMNWAGMR
CPYKLLRMVLALVCMSSEVGRAVWLRFSPPLPASGPQPSFMAHLAGAVVGVSMGLTIL
RSYEERLRDQCGWWVVLLAYGTFLLFAVFWNVFAYDLLGAHIPPPP"
BASE COUNT 242 a 519 c 501 g 297 t
ORIGIN
1 cttggacctt ggccctcgct ttccaggatg ggtagggtgg aagacggggg aacaactgag
61 gagctggagg actgggaccc aggcaccagt gccctgccag ctcctgggat caagcagggt
121 cccagggaac agacaggcac ggggcccctg tcccaaaagt gctgggagcc tgagcctgat
181 gctcccagcc agcctggccc agccctttgg tccaggggtc gggcccgcac tcaggccttg
241 gctggcggct cctcactgca gcagctggac cccgagaaca caggcttcat cggtgcggac
301 accttcactg gcctggtgca cagccatgag ctgcccctgg acccggccaa gctggacatg
361 ctggtggccc tggctcagag caacgagcag ggccaggtct gctaccagga gctggtggac
421 ctgatcagca gcaagcgctc cagcagtttc aagcgggcca ttgctaacgg acagcgggca
481 ctgccccggg acgggccgct ggatgagcca ggcctaggtg tctacaagcg gtttgtgcgt
541 tacgtggcct acgagatcct gccttgtgag gtggaccgcc gctggtactt ctaccgtcac
601 cgcagctgcc caccccccgt gttcatggcc tcggtcactc ttgcccagat catcgtgttc
661 ctgtgttacg gggcccgcct caacaagtgg gtgctgcaga cctaccaccc cgagtacatg
721 aagagccccc ttgtgtacca ccccgggcac cgtgcccgcg cctggcgctt cctcacctac
781 atgttcatgc acgttgggct ggagcagctg gggttcaacg ccctcctgca gctgatgatc
841 ggggtgcccc tggagatggt gcacggcctg ctccgcatca gcctgctcta cctggcaggc
901 gtgctggcag gctccctaac cgtctccatc accgacatgc gggccccggt ggtgggaggc
961 tccggcgggg tctacgccct gtgctcggca cacctggcca acgttgtcat gaactgggct
1021 gggatgagat gtccctacaa gttgctgagg atggtgctgg ccttggtgtg catgagctcc
1081 gaggtgggcc gggccgtgtg gctgcgcttc tccccgccgc tgcccgcctc gggcccacag
1141 cccagcttca tggcgcacct ggcaggcgcg gtggtggggg tgagcatggg cctgaccatc
1201 ctgcggagct acgaggagcg cctgcgggac cagtgcggct ggtgggtggt gctgctggcc
1261 tacggcacct tcctgctctt cgccgtcttc tggaacgtct tcgcctacga cctgctgggc
1321 gcccacatcc ccccaccgcc ctgaccggct acctgaggct gcacaggcca gggctcgggc
1381 atgtggtggc cgcccaccag gggccttcac gtctgccctt tgtgaacgga cgtctcaggg
1441 ctgctgtgcc ccttgggtgt gggtggcctc aaaggaggcc ctgtcccagc cacccacccc
1501 ccactcccag gacttgcggt ctgagccttt ttggataatt aataaatatt ttacacagc
//