LOCUS Y14690 4629 bp mRNA linear HUM 07-OCT-2008
DEFINITION Homo sapiens mRNA for procollagen alpha 2(V).
ACCESSION Y14690
VERSION Y14690.1
KEYWORDS COL5A2 gene; procollagen type V alpha 2.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 2 (bases 1 to 4629)
AUTHORS Richards A.J.
JOURNAL Submitted (02-SEP-1997) to the INSDC. A.J. Richards, University of
Cambridge, Department of Pathology, Tennis Court Road, Cambridge,
UK
REFERENCE 3
AUTHORS Weil D., Bernard M., Gargano S., Ramirez F.
TITLE The pro alpha 2(V) collagen gene is evolutionarily related to the
major fibrillar-forming collagens
JOURNAL Nucleic Acids Res. 15(1), 181-198(1987).
PUBMED 3029669
REFERENCE 4
AUTHORS Woodbury D., Bensonchanda V., Ramirez F.
TITLE Amino-terminal propeptide of human pro-alpha-2(V) collagen conforms
to the structural criteria of a fibrillar procollagen molecule
JOURNAL J Biol Chem 5, 2735-2738(1989).
COMMENT Related sequence: X04758
FEATURES Location/Qualifiers
source 1..4629
/db_xref="H-InvDB:HIT000325831"
/organism="Homo sapiens"
/chromosome="2"
/mol_type="mRNA"
/db_xref="taxon:9606"
CDS 139..4629
/gene="COL5A2"
/product="procollagen alpha 2(V)"
/db_xref="GOA:P05997"
/db_xref="H-InvDB:HIT000325831.13"
/db_xref="HGNC:HGNC:2210"
/db_xref="InterPro:IPR000885"
/db_xref="InterPro:IPR001007"
/db_xref="InterPro:IPR008160"
/db_xref="PDB:1A9A"
/db_xref="UniProtKB/Swiss-Prot:P05997"
/protein_id="CAA75002.1"
/translation="MMANWAEARPLLILIVLLGQFVSIKAQEEDEDEGYGEEIACTQN
GQMYLNRDIWKPAPCQICVCDNGAILCDKIECQDVLDCADPVTPPGECCPVCSQTPGG
GNTNFGRGRKGQKGEPGLVPVVTGIRGRPGPAGPPGSQGPRGERGPKGRPGPRGPQGI
DGEPGVPGQPGAPGPPGHPSHPGPDGLSRPFSAQMAGLDEKSGLGSQVGLMPGSVGPV
GPRGPQGLQGQQGGAGPTGPPGEPGDPGPMGPIGSRGPEGPPGKPGEDGEPGRNGNPG
EVGFAGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVGAPGSKGEAGPTGPMGAMGP
LGPRGMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGPT
GARGPEGPQGQRGETGPPGPVGSPGLPGAIGTDGTPGPKGPTGSPGTSGPPGSAGPPG
SPGPQGSTGPQGNSGLPGDPGFKGEAGPKGEPGPHGIQGPIGPPGEEGKRGPRGDPGT
LGPPGPVGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGSQGDPGRPGEPGLP
GARGLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSIGIKGQPGTMGLPGPKGSNGDPG
KPGEAGNPGVPGQRGAPGKDGKVGPYGPPGPPGLRGERGEQGPPGPTGFQGHPGPPGP
PGEGGKPGDQGVPGGPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPK
GSPGPSGTPGDTGPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGAGGLPG
PLGPPGPAGLLGEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGSDGQPGV
KGEPGEPGQKGDAGSPGPQGLAGSPGPHGPNGVPGLKGGRGTQGPPGATGFPGSAGRV
GPPGPAGAPGPAGPLGEPGKEGPPGPRGDPGSHGRVGVRGPAGPPGGPGDKGDPGEDG
QPGPDGPPGPAGTTGQRGIVGMPGQRGERGMPGLPGPAGTPGKVGPTGATGDKGPPGP
VGPPGSNGPVGEPGPEGPAGNDGTPGRDGAVGERGDRGDPGPAGLPGSQGAPGTPGPV
GAPGDAGQRGDPGSRGPIGHLGRAGKRGLPGPQGPRGDKGDHGDRGDRGQKGHRGFTG
LQGLPGPPGPNGEQGSAGIPGPFGPRGPPGPVGPSGKEGNPGPLGPLGPPGVRGSVGE
AGPEGPPGEPGPPGPPGPPGHLTAALGDIMGHYDESMPDPLPEFTEDQAAPDDKNKTD
PGVHATLKSLSSQIETMRSPDGSKKHPARTCDDLKLCHSAKQSGEYWIDPNQGSVEDA
IKVYCNMETGETCISANPSSVPRKTWWASKSPDNKPVWYGLDMNRGSQFAYGDHQSPN
TAITQMTFLRLLSKEASQNITYICKNSVGYMDDQAKNLKKAVVLKGANDLDIKAEGNI
RFRYIVLQDTCSKRNGNVGKTVFEYRTQNVARLPIIDLAPVDVGGTDQEFGVEIGPVC
FV"
BASE COUNT 1130 a 1127 c 1454 g 918 t
ORIGIN
1 gggggtgaaa aagggggttt gcagaggctg ccctggggct ggtgctgaaa gaagagccca
61 cagctgactt catggtgcta caataacctc agaatctact tttcactctc aggagaaccc
121 acagtctaat atttagacat gatggcaaac tgggcggaag caagacctct cctcattctt
181 attgttttat tagggcaatt tgtctcaata aaagcccagg aagaagacga ggatgaagga
241 tatggtgaag aaatagcctg cactcagaat ggccagatgt acttaaacag ggacatttgg
301 aaacctgccc cttgtcagat ctgtgtctgt gacaatggag ccattctctg tgacaagata
361 gaatgccagg atgtgctgga ctgtgccgac cctgtaacgc cccctgggga atgctgtcct
421 gtctgttcac aaacacctgg aggtggcaat acaaattttg gtagaggaag aaagggacaa
481 aagggagaac caggattagt gcctgttgta acaggcatac gtggtcgtcc aggaccggca
541 ggacctccag gatcacaggg accaagagga gagcgagggc caaaaggaag acctggccct
601 cgtggacctc agggaattga tggagaacca ggtgttcctg gtcaacctgg tgctccagga
661 cctcctggac atccgtccca cccaggaccc gatggcttga gcaggccgtt ttcagctcaa
721 atggctgggt tggatgaaaa atctggactt gggagtcaag taggactaat gcctggctct
781 gtgggtcctg ttggcccaag gggaccacag ggtttacaag gacagcaagg tggtgcagga
841 cctacaggac ctcctggtga acctggtgat cctggaccaa tgggtccgat tggttcacgt
901 ggaccagagg gccctcctgg taaacctggg gaagatggtg aacctggcag aaatggaaat
961 cctggtgaag tgggatttgc aggatctccg ggagctcgtg gatttcctgg ggctcctggt
1021 cttccaggtc tgaagggtca ccgaggacac aaaggtcttg aaggccctaa aggtgaagtt
1081 ggagcacctg gttccaaggg tgaagctggc cccactggtc caatgggtgc catgggtcct
1141 ctgggtccga ggggaatgcc aggagagaga gggagacttg ggccacaggg tgctcctgga
1201 caacgaggtg cacatggtat gcctggaaaa cctggaccaa tgggtcctct tgggatacca
1261 ggctcttctg gttttccagg aaatcctgga atgaagggag aagcaggtcc tacaggggcg
1321 cgaggccctg aaggtcctca ggggcagaga ggtgaaactg ggcccccagg tccagttggc
1381 tctccaggtc ttcctggtgc aataggaact gatggtactc ctggtcccaa aggcccaacg
1441 ggctctccgg gtacctctgg tcctcctggc tcagcagggc ctcctggatc tccaggacct
1501 cagggtagca ctggtcctca ggggaattcg ggccttccgg gtgatccagg tttcaaagga
1561 gaagctggcc caaaagggga accagggcca catggtattc agggtccgat aggcccaccc
1621 ggtgaagaag gcaaaagagg tcccagaggt gacccaggaa cacttggtcc tccagggcca
1681 gtgggagaaa ggggtgctcc tggcaatcgt ggttttccag gctctgatgg tttacctggg
1741 ccaaagggtg ctcaaggaga acggggtcct gtaggttctt caggacccaa aggaagccag
1801 ggggatccag gacgtccagg ggaacctggg cttccaggtg ctcggggttt gacaggaaat
1861 cctggtgttc aaggtcctga aggaaaactt ggacctttgg gtgcgccagg ggaagatggc
1921 cgtccaggtc ctccaggctc cataggaatc aaagggcagc ccgggaccat gggccttcca
1981 ggccccaaag gtagcaatgg tgaccctggg aaacctggag aagcaggaaa tcctggagtt
2041 cctgggcaaa ggggagctcc tggaaaagat ggtaaagttg gtccttatgg tcctcctggg
2101 ccgccgggtc tacgtggtga aagaggagaa caaggacctc cagggcccac aggttttcag
2161 gggcatcctg gtcctccagg tcctcctgga gaaggtggaa aaccaggtga tcaaggtgtt
2221 cctggaggtc ccggagcagt tggcccgtta ggacctagag gagaacgagg aaatcctggg
2281 gaaagaggag aacctgggat aactggactc cctggtgaga agggaatggc tggaggacat
2341 ggtcctgatg gcccaaaagg cagtccaggt ccatctggga cccctggaga tacaggccca
2401 ccaggtcttc aaggtatgcc gggagaaaga ggaattgcag gaactcctgg ccccaagggt
2461 gacagaggtg gcataggaga aaaaggtgct gaaggcacag ctggaaatga tggtgcagga
2521 ggtcttccag gtcctttggg ccctccaggt ccggcaggcc tactgggaga aaagggtgaa
2581 cctggtcctc gaggtttagt tggtcctcct ggctcccggg gcaatcctgg ttctcgaggt
2641 gaaaatgggc caactggagc tgttggtttt gccggacccc aggggtctga cggacagcct
2701 ggagtaaaag gtgaacctgg agagccagga cagaagggag atgctggttc tcctggacca
2761 caaggtttag caggatcccc tggccctcat ggtcctaatg gtgttcctgg actaaaaggt
2821 ggtcgaggaa cccaaggtcc gcctggtgct acaggatttc ctggttctgc gggcagagtt
2881 ggacctccag gccctgctgg agctccagga cctgcgggac ccctagggga acccgggaag
2941 gagggacctc caggtcctcg tggggaccct ggctctcatg ggcgtgtggg agtccgagga
3001 ccagctggcc cccctggtgg cccaggagac aaaggggacc caggagaaga tgggcaacct
3061 ggtccagatg gcccccctgg tccagctgga acgaccgggc agagaggaat tgttggcatg
3121 cctgggcaac gtggagagag aggcatgccc ggcctaccag gcccagcggg aacaccagga
3181 aaagtaggac caactggtgc aacaggagat aaaggtccac ctggacctgt ggggccccca
3241 ggctccaatg gtcctgtagg ggaacctgga ccagaaggtc cagctggcaa tgatggtacc
3301 ccaggacggg atggtgctgt tggagaacgt ggtgatcgtg gagaccctgg gcctgcaggt
3361 ctgccaggct ctcagggtgc ccctggaact cctggccctg tgggtgctcc aggagatgca
3421 ggacaaagag gagatccggg ttctcggggt cctataggac acctgggtcg agctggaaaa
3481 cgtggattac ctggacccca aggacctcgt ggtgacaaag gtgatcatgg agaccgaggc
3541 gacagaggtc agaagggcca cagaggcttt actggtcttc agggtcttcc tggccctcct
3601 ggtccaaatg gtgaacaagg aagtgctgga atccctggac catttggccc aagaggtcct
3661 ccaggcccag ttggtccttc aggtaaagaa ggaaaccctg ggccacttgg gccattggga
3721 cctccaggtg tacgaggcag tgtaggagaa gcaggacctg agggccctcc tggtgagcct
3781 ggcccacctg gccctccggg tccccctggc caccttacag ctgctcttgg ggatatcatg
3841 gggcactatg atgaaagcat gccagatcca cttcctgagt ttactgaaga tcaggcggct
3901 cctgatgaca aaaacaaaac ggacccaggg gttcatgcta ccctgaagtc actcagtagt
3961 cagattgaaa ccatgcgcag ccccgatggc tcgaaaaagc acccagcccg cacgtgtgat
4021 gacctaaagc tttgccattc cgcaaagcag agtggtgaat actggattga tcctaaccaa
4081 ggatctgttg aagatgccat caaagtttac tgcaacatgg aaacaggaga aacatgtatt
4141 tcagcaaacc catccagtgt accacgtaaa acctggtggg ccagtaaatc tcctgacaat
4201 aaacctgttt ggtatggtct tgatatgaac agagggtctc agttcgctta tggagaccac
4261 caatcaccta atacagccat tactcagatg acttttttgc gccttttatc aaaagaagcc
4321 tcccagaaca tcacttacat ctgtaaaaac agtgtaggat acatggacga tcaagctaag
4381 aacctcaaaa aagctgtggt tctcaaaggg gcaaatgact tagatatcaa agcagaggga
4441 aatattagat tccggtatat cgttcttcaa gacacttgct ctaagcggaa tggaaatgtg
4501 ggcaagactg tctttgaata tagaacacag aatgtggcac gcttgcccat catagatctt
4561 gctcctgtgg atgttggcgg cacagaccag gaattcggcg ttgaaattgg gccagtttgt
4621 tttgtgtaa
//