LOCUS Y13667 3452 bp mRNA linear HUM 07-OCT-2008
DEFINITION Homo sapiens mRNA for putative transcription factor XPRF.
ACCESSION Y13667
VERSION Y13667.1
KEYWORDS transcription factor XPRF; Xprf gene.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1
AUTHORS Quaderi N., Schweiger S., Gaudenz K., Franco B., Rugarli E.I.,
Berger W., Feldman G.J., Volta M., Andolfi G., Gilgenkrantz S.,
Marion R.W., Hennekam R.C.M., Opit J.M., Muenke M., Ropers H.H.,
Ballabio A.
TITLE Opitz G/BBB syndrome, a defect of midline development, is due to
mutations in a new RING finger gene on Xp22
JOURNAL Nat Genet 17(3), 285-291(1997).
PUBMED 9354791
REFERENCE 2 (bases 1 to 3452)
AUTHORS Rugarli E.I.
JOURNAL Submitted (09-JUN-1997) to the INSDC. E.I. Rugarli, TIGEM -
Telethon Institute of Genetics and Medicine, Via Olgettina, 58,
I-20132 Milano, ITALY
REMARK revised by submitter 28-JUL-1997
FEATURES Location/Qualifiers
source 1..3452
/db_xref="H-InvDB:HIT000325789"
/organism="Homo sapiens"
/chromosome="X"
/map="p22.3"
/mol_type="mRNA"
/clone_lib="NT-2 differentiated"
/db_xref="taxon:9606"
CDS 187..2190
/gene="Xprf"
/product="putative transcription factor XPRF"
/db_xref="GOA:O15344"
/db_xref="H-InvDB:HIT000325789.13"
/db_xref="HGNC:HGNC:7095"
/db_xref="InterPro:IPR000315"
/db_xref="InterPro:IPR001841"
/db_xref="InterPro:IPR001870"
/db_xref="InterPro:IPR003649"
/db_xref="InterPro:IPR003877"
/db_xref="InterPro:IPR003879"
/db_xref="InterPro:IPR003961"
/db_xref="InterPro:IPR006574"
/db_xref="InterPro:IPR013083"
/db_xref="InterPro:IPR013320"
/db_xref="InterPro:IPR013783"
/db_xref="InterPro:IPR017903"
/db_xref="InterPro:IPR017907"
/db_xref="InterPro:IPR027370"
/db_xref="InterPro:IPR027727"
/db_xref="InterPro:IPR036116"
/db_xref="InterPro:IPR040859"
/db_xref="PDB:2DQ5"
/db_xref="PDB:2FFW"
/db_xref="PDB:2JUN"
/db_xref="PDB:5IM8"
/db_xref="UniProtKB/Swiss-Prot:O15344"
/protein_id="CAA74018.1"
/translation="METLESELTCPICLELFEDPLLLPCAHSLCFNCAHRILVSHCAT
NESVESITAFQCPTCRHVITLSQRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSETRR
ERAFDANTMTSAEKVLCQFCDQDPAQDAVKTCVTCEVSYCDECLKATHPNKKPFTGHR
LIEPIPDSHIRGLMCLEHEDEKVNMYCVTDDQLICALCKLVGRHRDHQVAALSERYDK
LKQNLESNLTNLIKRNTELETLLAKLIQTCQHVEVNASRQEAKLTEECDLLIEIIQQR
RQIIGTKIKEGKVMRLRKLAQQIANCKQCIERSASLISQAEHSLKENDHARFLQTAKN
ITERVSMATASSQVLIPEINLNDTFDTFALDFSREKKLLECLDYLTAPNPPTIREELC
TASYDTITVHWTSDDEFSVVSYELQYTIFTGQANVVSLCNSADSWMIVPNIKQNHYTV
HGLQSGTKYIFMVKAINQAGSRSSEPGKLKTNSQPFKLDPKSAHRKLKVSHDNLTVER
DESSSKKSHTPERFTSQGSYGVAGNVFIDSGRHYWEVVISGSTWYAIGLAYKSAPKHE
WIGKNSASWALCRCNNNWVVRHNSKEIPIEPAPHLRRVGILLDYDNGSIAFYDALNSI
HLYTFDVAFAQPVCPTFTVWNKCLTIITGLPIPDHLDCTEQLP"
BASE COUNT 952 a 824 c 767 g 909 t
ORIGIN
1 atttcgccgg gttgcttttg tcttgcgggc tcctgtcggg ttcggtgttt ccgctctgaa
61 gactgcgacg cgggctccga tgcagctcgc tccctgccgg atgggtcatg ggattctaaa
121 catgaggcag atagctgatc agcttccttg ggttttgctg atgacacaag agagctttgc
181 ctgaagatgg aaacactgga gtcagaactg acctgcccta tttgtctgga gctctttgag
241 gaccctcttc tactgccctg cgcacacagc ctctgcttca actgcgccca ccgcatccta
301 gtatcacact gtgccaccaa cgagtctgtg gagtccatca ccgccttcca gtgccccacc
361 tgccggcatg tcatcaccct cagccagcga ggtctagacg ggctcaagcg caacgtcacc
421 ctacagaaca tcatcgacag gttccagaaa gcatcagtga gcgggcccaa ctctcccagc
481 gagacccgtc gggagcgggc ctttgacgcc aacaccatga cctccgccga gaaggtcctc
541 tgccagtttt gtgaccagga tcctgcccag gacgctgtga agacctgtgt cacttgtgaa
601 gtatcctact gtgacgagtg cctgaaagcc actcacccga ataagaagcc ctttacaggc
661 catcgtctga ttgagccaat tccggactct cacatccggg ggctgatgtg cttggagcat
721 gaggatgaga aggtgaatat gtactgtgtg accgatgacc agttaatctg tgccttgtgt
781 aaactggttg ggcggcaccg cgatcatcag gtggcagctt tgagtgagcg ctatgacaaa
841 ttgaagcaaa acttagagag taacctcacc aaccttatta agaggaacac agaactggag
901 acccttttgg ctaaactcat ccaaacctgt caacatgttg aagtcaatgc atcacgtcaa
961 gaagccaaat tgacagagga gtgtgatctt ctcattgaga tcattcagca aagacgacag
1021 attattggaa ccaagatcaa agaagggaag gtgatgaggc ttcgcaaact ggctcagcag
1081 attgcaaact gcaaacagtg cattgagcgg tcagcatcac tcatctccca agcggaacac
1141 tctctgaagg agaatgatca tgcgcgtttc ctacagactg ctaagaatat caccgagaga
1201 gtctccatgg caactgcatc ctcccaggtt ctaattcctg aaatcaacct caatgacaca
1261 tttgacacct ttgccttaga tttttcccga gagaagaaac tgctagaatg tctggattac
1321 cttacagctc ccaaccctcc cacaattaga gaagagctct gcacagcttc atatgacacc
1381 atcactgtgc attggacctc cgatgatgag ttcagcgtgg tctcctacga gctccagtac
1441 accatattca ccggacaagc caacgtcgtt agtctgtgta attcggctga tagctggatg
1501 atagtaccca acatcaagca gaaccactac acggtgcacg gtctgcagag cggcaccaag
1561 tacatcttca tggtcaaggc catcaaccag gcgggcagcc gcagcagtga gcctgggaag
1621 ttgaagacaa acagccaacc atttaaactg gatcccaaat ctgctcatcg aaaactgaag
1681 gtgtcccatg ataacttgac agtagaacgt gatgagtcat catccaagaa gagtcacaca
1741 cctgaacgct tcaccagcca ggggagctat ggagtagctg gaaatgtgtt tattgatagt
1801 ggccggcatt attgggaagt ggtcataagt ggaagcacat ggtatgccat tggtcttgct
1861 tacaaatcag ccccgaagca tgaatggatt gggaagaact ctgcttcctg ggcgctctgc
1921 cgctgcaaca ataactgggt ggtgagacac aatagcaagg aaatccccat tgagcctgcc
1981 ccccacctcc ggcgcgtggg catcctgctg gactatgata acggctctat cgccttttat
2041 gatgctttga actccatcca cctctacacc ttcgacgtcg catttgcgca gcctgtttgc
2101 cccaccttca ccgtgtggaa caagtgtctg acgattatca ctgggctccc tatcccagac
2161 catttggact gcacagagca gctgccgtga gcgtctggcc acatggagct gctttctggg
2221 gaacagtaag gttcaggcca ctatttaggg gactgagaaa gcacaggctt catgagtgta
2281 atgaaatctc accagaagtg tcccgaaatc ggctcagata gggctcaaaa caagagattc
2341 ctctcctttt actgtgtctt gtattaagta cgggctttaa taatttcttt aatttttttg
2401 tatttagagg aaaatctata gattatttat aagagaaaca taatcaggat tacaactttt
2461 aggaattact tggttttgca cattaagagg cccataagtt tatcagctat ttacaacctt
2521 catttcatca caatctgtgg gcttacaaaa aaacaaaaac ttttgtagtt ttgtatgtta
2581 ctcatcttct tacctgatat cccatgatga tcccatggta ggtcttctca cctcgatggt
2641 gcataacagg atgtgtttga acctagtagg ggaggaaaca ggctttctta ctctggttta
2701 atttgaagtg ttttaattgt gatgtcaaaa agttgtatca gatcaactaa aatggagagc
2761 aagacagaga atgaaaagag ttgattttgg acctcggacc ttgccgtggc taaatcttta
2821 ccttctcata gctgatggga taatgttgga aagaaaggtt gtgaatcctt tggccacatt
2881 ttgccctgct tctctcaggg ttaagggttc tggaagaaca ttaagaatga gatgcaattg
2941 aaaatagtca ttttgaatcc tattgattat tcaaaaattc aggctgattg tcttttatca
3001 gaggtaggat tctgttttat agtatagaat ctactttatc ccttcctttt aatagttcct
3061 ttagacctgt gaaatttctt cactacattt aatagttctc ctatttcccg ctcccccata
3121 tcaattttcc ttttgtctcc ggggctgagt aaataaacat gttctgtcac aaatagcagc
3181 accactttgg attgattttg ctctccagga catcagcaca tggccctgat cagcactacc
3241 acatccaaac ataagtcact gaaaaacact taatatttat gagttggtaa tgacaaggga
3301 cattgtataa agtactattt gctagattca tgcctcaaaa gttattataa acagaccttt
3361 attaaacaca tcttgaaaga tgtagaagtc cctctatagt ctagtatagt ttacaataga
3421 gttgtaagac caaaaaaaaa aaaaaaaaaa aa
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