LOCUS Y13618 7932 bp mRNA linear HUM 07-OCT-2008
DEFINITION Homo sapiens mRNA for DFFRY protein, abundant transcript.
ACCESSION Y13618
VERSION Y13618.1
KEYWORDS DFFRY gene.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1
AUTHORS Brown G.M., Furlong R.A., Sargent C.A., Erickson R.P.,
Longepied G., Mitchell M., Jones M.H., Hargreave T.B., Cooke H.J.,
Affara N.A.
TITLE Characterisation of the coding sequence and fine mapping of the
human DFFRY gene and comparative expression analysis and mapping to
the Sxrb interval of the mouse Y chromosome of the Dffry gene
JOURNAL Hum. Mol. Genet. 7(1), 97-107(1998).
PUBMED 9384609
REFERENCE 2 (bases 1 to 7932)
AUTHORS Brown G.M.
JOURNAL Submitted (03-JUN-1997) to the INSDC. G.M. Brown, University of
Cambridge, Pathology, Tennis Court Road, Cambridge, CB2 1QP, UK
FEATURES Location/Qualifiers
source 1..7932
/db_xref="H-InvDB:HIT000325782"
/organism="Homo sapiens"
/chromosome="Y"
/map="q11.2"
/mol_type="mRNA"
/db_xref="taxon:9606"
CDS 58..7725
/gene="DFFRY"
/note="abundant transcript"
/db_xref="GOA:O00507"
/db_xref="H-InvDB:HIT000325782.12"
/db_xref="HGNC:HGNC:12633"
/db_xref="InterPro:IPR001394"
/db_xref="InterPro:IPR016024"
/db_xref="InterPro:IPR018200"
/db_xref="InterPro:IPR028889"
/db_xref="InterPro:IPR038765"
/db_xref="UniProtKB/Swiss-Prot:O00507"
/protein_id="CAA73940.1"
/translation="MTAITHGSPVGGNDSQGQVLDGQSQHLFQQNQTSSPDSSNENSV
ATPPPEEQGQGDAPPQHEDEEPAFPHTELANLDDMINRPRWVVPVLPKGELEVLLEAA
IDLSVKGLDVKSEACQRFFRDGLTISFTKILMDEAVSGWKFEIHRCIINNTHRLVELC
VAKLSQDWFPLLELLAMALNPHCKFHIYNGTRPCELISSNAQLPEEELFARSSDPRSP
KGWLVDLINKFGTLNGFQILHDRFFNGSALNIQIIAALIKPFGQCYEFLSQHTLKKYF
IPVIEIVPHLLENLTDEELKKEAKNEAKNDALSMIIKSLKNLASRISGQDETIKNLEI
FRLKMILRLLQISSFNGKMNALNEINKVISSVSYYTHRHSNPEEEEWLTAERMAEWIQ
QNNILSIVLQDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNV
HDLLAKLAWDFSPGQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKV
LNLLWNLAQSDDVPVDIMDLALSAHIKILDYSCSQDRDAQKIQWIDHFIEELRTNDKW
VIPALKQIREICSLFGEASQNLSQTQRSPHIFYRHDLINQLQQNHALVTLVAENLATY
MNSIRLYAGDHEDYDPQTVRLGSRYSHVQEVQERLNFLRFLLKDGQLWLCAPQAKQIW
KCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDPSLLTENGMKC
FERFFKAVNCRERKLIAKRRSYMMDDLELIGLDYLWRVVIQSSDEIANRAIDLLKEIY
TNLGPRLKANQVVIHEDFIQSCFDRLKASYDTLCVFDGDKNSINCARQEAIRMVRVLT
VIKEYINECDSDYHKERMILPMSRAFCGKHLSLIVRFPNQGRQVDELDIWFHTNDTIG
SVRRCIVNRIKANVAHKKIELFVGGELIDSENDRKLIGQLNLKDKSLITAKLTQINFN
MPSSPDSSSDSSTASPGNHRNHYNDGPNLKVESCLPGVIMSVHPKYISFLWQFANLGS
NLNMPPLKNGARVLMKLMPPDRTAVEKLRTVCLDHANLGEGKLSPPLDSLFFGPSASQ
VLYLTEVVYALLMPAGVPLTDGSSDFQVHFLKSGGLPLVLSMLIRNNFLPNTDMETRR
GAYLNALKIAKLLLTAIGYGHVRAVAEACQPVVDGTDPITQINQVTHDQAVVLQSALQ
SIPNPSSECVLRNESILLAQEISNEASRYMPDICVIRAIQKIIWASACGALGLFFSPN
EEITKIYQMTTNGSNKLEVEDEQVCCEALEVMTLCFALLPTALDALSKEKAWQTFIID
LLLHCPSKTVRQLAQEQFFLMCTRCCMGHRPLLFFITLLFTILGSTAREKGKYSGDYF
TLLRHLLNYAYNGNINIPNAEVLLVSEIDWLKRIRDNVKNTGETGVEEPILEGHLGVT
KELLAFQTSEKKYHFGCEKGGANLIKELIDDFIFPASKVYLQYLRSGELPAEQAIPVC
SSPVTINAGFELLVALAIGCVRNLKQIVDCLTEMYYMGTAITTCEALTEWEYLPPVGP
RPPKGFVGLKNAGATCYMNSVIQQLYMIPSIRNSILAIEGTGSDLHDDMFGDEKQDSE
SNVDPRDDVFGYPHQFEDKPALSKTEDRKEYNIGVLRHLQVIFGHLAASQLQYYVPRG
FWKQFRLWGEPVNLREQHDALEFFNSLVDSLDEALKALGHPAILSKVLGGSFADQKIC
QGCPHRFECEESFTTLNVDIRNHQNLLDSLEQYIKGDLLEGANAYHCEKCDKKVDTVK
RLLIKKLPRVLAIQLKRFDYDWERECAIKFNDYFEFPRELDMGPYTVAGVANLERDNV
NSENELIEQKEQSDNETAGGTKYRLVGVLVHSGQASGGHYYSYIIQRNGKDDQTDHWY
KFDDGDVTECKMDDDEEMKNQCFGGEYMGEVFDHMMKRMSYRRQKRWWNAYIPFYEQM
DMIDEDDEMIRYISELTIARPHQIIMSPAIERSVRKQNVKFMHNRLQYSLEYFQFVKK
LLTCNGVYLNPAPGQDYLLPEAEEITMISIQLAARFLFTTGFHTKKIVRGPASDWYDA
LCVLLRHSKNVRFWFTHNVLFNVSNRFSEYLLECPSAEVRGAFAKLIVFIAHFSLQDG
SCPSPFASPGPSSQACDNLSLSDHLLRATLNLLRREVSEHGHHLQQYFNLFVMYANLG
VAEKTQLLKLNVPATFMLVSLDEGPGPPIKYQYAELGKLYSVVSQLIRCCNVSSTMQS
SINGNPPLPNPFGDLNLSQPIMPIQQNVLDILFVRTSYVKKIIEDCSNSEDTIKLLRF
CSWENPQFSSTVLSELLWQVAYSYTYELRPYLDLLFQILLIEDSWQTHRIHNALKGIP
DDRDGLFDTIQRSKNHYQKRAYQCIKCMVALFSSCPVAYQILQGNGDLKRKWTWAVEW
LGDELERRPYTGNPQYSYNNWSPPVQSNETANGYFLERSHSARMTLAKACELCPEEEP
DDQDAPDEHEPSPSEDAPLYPHSPASQYQQNNHVHGQPYTGPAAHHLNNPQKTGQRTQ
ENYEGNEEVSSPQMKDQ"
variation 6268^6269
/replace="gatgtttctgtttta"
/note="rare transcript Y13619"
BASE COUNT 2497 a 1470 c 1665 g 2300 t
ORIGIN
1 ggcttatgag tatttcttcc agggtaaaaa gcaaaagaat tccgggctgt gtcaagtatg
61 acagccatca ctcatggctc tccagtagga gggaacgaca gccagggcca ggttcttgat
121 ggccagtctc agcatctctt ccaacagaac cagacttcat cacctgattc ttccaatgag
181 aattccgtag caactcctcc tccagaggaa caagggcaag gtgatgcccc accacagcat
241 gaagatgaag agcctgcatt tccacatact gagctggcaa acctggatga catgatcaac
301 aggcctcgat gggtggttcc tgttttgcca aaaggggaat tagaagtgct tttagaagct
361 gctattgatc ttagtgtaaa aggccttgat gttaaaagtg aagcatgcca acgttttttt
421 cgagatggac taacaatatc tttcactaaa attcttatgg atgaggctgt gagtggctgg
481 aagtttgaaa ttcatagatg tattattaac aatactcatc gcctagtgga gctttgtgtg
541 gccaagttgt cccaagattg gtttccactt ctagaacttc tcgccatggc cttaaatcct
601 cactgcaagt ttcatatcta caatggtaca cgtccgtgtg aattaatttc ctcaaatgct
661 cagttgcctg aagaagaatt atttgctcgt tcttcagatc ctcgatcacc aaaaggttgg
721 ctagtggatc tcatcaataa atttggcaca ttaaatgggt tccagatttt gcatgatcgt
781 ttttttaatg gatcagcatt aaatattcaa ataattgcag ctcttattaa accatttgga
841 caatgctatg agtttctcag tcaacataca ctgaaaaagt acttcattcc agttatagaa
901 atagttccac atttattgga aaacttaact gatgaagaac tgaaaaagga ggcaaagaat
961 gaagccaaaa atgatgccct ttcaatgatt attaaatctt tgaagaactt agcttcaaga
1021 atttcaggac aagatgagac tataaaaaat ttggaaattt ttaggttaaa gatgatactc
1081 agattgttgc aaatttcctc ttttaatgga aagatgaatg cactgaatga aataaataag
1141 gttatatcta gtgtatcata ttatactcat cggcatagta atcctgagga ggaagaatgg
1201 ctgacagctg agcgaatggc agaatggata cagcaaaata atatcttatc catagtcttg
1261 caagacagtc ttcatcaacc acaatatgta gaaaagctag agaaaattct tcgttttgtg
1321 attaaagaaa aggctcttac attacaggac cttgataata tctgggcagc acaggcagga
1381 aaacatgaag ccattgtgaa gaatgtacat gatctgctag caaagttggc ttgggatttt
1441 tctcctggac aacttgatca tctttttgat tgctttaagg caagttggac aaatgcaagt
1501 aaaaagcaac gtgaaaagct ccttgagttg atacgccgtc ttgcagaaga tgataaagat
1561 ggtgtgatgg cacacaaagt gttgaacctt ctttggaacc tggctcagag tgatgatgtg
1621 cctgtagaca tcatggacct tgctcttagt gcccacataa aaatactaga ttatagttgt
1681 tcccaggatc gagatgcaca gaagatccag tggatagatc actttataga agaacttcgc
1741 acaaatgaca agtgggtaat tcctgctctg aaacaaataa gagaaatttg tagtttgttt
1801 ggtgaagcat ctcaaaattt gagtcaaact cagcgaagtc cccacatatt ttatcgccat
1861 gatttaatca accagcttca acaaaatcat gctttagtta ctttggtagc agaaaacctt
1921 gcaacctaca tgaatagcat cagattgtat gctggagatc atgaagacta tgatccacaa
1981 acagtgaggc ttggaagtcg atacagtcat gttcaagaag ttcaagaacg actaaacttc
2041 cttagatttt tactgaagga tggccaactg tggctctgtg ctcctcaggc aaaacaaata
2101 tggaagtgct tagcagaaaa tgcagtttat ctttgtgatc gtgaagcctg ttttaagtgg
2161 tattccaagt taatggggga tgaaccagac ttggatcctg atattaataa ggacttcttt
2221 gaaagtaatg tacttcagct tgatccttcc cttttaactg aaaatggaat gaaatgcttt
2281 gaaagatttt tcaaagctgt caattgtcga gaaaggaaac taatagcaaa aagaagatcc
2341 tatatgatgg atgatttgga attaattgga ctagactacc tttggagggt tgtgattcag
2401 agtagtgacg agattgctaa cagagctata gatcttctta aagagatata cacaaacctt
2461 ggcccaagat taaaagccaa tcaggtggtt atccatgaag acttcattca gtcttgcttt
2521 gatcgtttaa aagcatcata tgatacactg tgtgtttttg atggtgacaa aaacagcatt
2581 aattgtgcaa gacaagaagc cattcgaatg gttagagtat taactgttat aaaagagtac
2641 attaatgaat gtgacagtga ttatcacaag gaaagaatga ttttacctat gtcgagagca
2701 ttttgtggca aacacctctc tcttatagtt cggtttccaa accagggcag acaggttgat
2761 gagttggata tatggtttca tacgaatgac acaattggtt cagtacggcg atgtattgtt
2821 aatcgtatta aagccaatgt agcccacaaa aaaattgaac tttttgtggg tggtgagctg
2881 atagattctg aaaatgacag aaagctaatt ggacaattaa acttaaaaga taaatctcta
2941 attacagcca aacttacaca aataaatttc aatatgccat caagtcctga tagctcttcc
3001 gattcctcaa ctgcatctcc tggaaaccac cgtaatcatt acaatgatgg tcccaatcta
3061 aaggtggaaa gttgtttgcc tggggtgata atgtcagtgc atcccaaata catctctttc
3121 ctttggcaat ttgcaaactt aggtagcaac ctgaatatgc cacctcttaa aaatggagca
3181 agagtactta tgaaacttat gccaccagat agaacagctg tagaaaaatt acgaactgtt
3241 tgtttggacc atgcaaacct tggagaaggc aaacttagtc caccccttga ctcccttttc
3301 tttggtcctt ctgcctccca agttctatac ctaacagagg tagtttatgc cttgttaatg
3361 cctgctggtg tgcctctaac tgatgggtcc tctgactttc aagttcactt cttgaaaagt
3421 ggtggcttac ctcttgtact gagtatgcta ataagaaata acttcttgcc aaatacagat
3481 atggaaactc gaaggggtgc ttatttaaat gctcttaaaa tagccaaact gttgttaact
3541 gcgattggct atggccatgt tcgagctgta gcagaagctt gtcagccagt tgtagatggt
3601 acagacccca taacacagat taaccaagtt actcatgatc aagcagtggt gctacaaagt
3661 gcccttcaga gcattcctaa tccctcatcc gagtgcgtac ttagaaatga gtccatactt
3721 cttgctcagg aaatatctaa tgaggcttca agatatatgc ctgatatttg tgtaattagg
3781 gctatacaga aaattatctg ggcatcagca tgtggggcat taggactatt ttttagccca
3841 aatgaagaaa taactaaaat ttatcagatg accaccaatg gaagcaataa gctggaggtg
3901 gaagatgaac aagtttgttg tgaagcactg gaagtgatga ccttatgttt tgctttactt
3961 ccaacagcgt tggatgcact tagtaaagaa aaagcctggc agaccttcat cattgactta
4021 ttattgcact gtccaagcaa aactgttcgt cagttggcac aggagcagtt ctttttaatg
4081 tgcaccagat gttgcatggg acacaggcct ctgcttttct tcattacttt actctttacc
4141 atactgggga gcacagcaag agagaagggt aaatattcag gtgattattt cacactttta
4201 cggcaccttc tcaattatgc ttacaatggc aatattaaca tacccaatgc tgaagttctt
4261 cttgtcagtg aaattgattg gctcaaaagg attagggata atgttaaaaa cacaggtgaa
4321 acaggtgtcg aagagccaat actggaaggc caccttgggg taacaaaaga gttattggcc
4381 tttcaaactt ctgagaaaaa gtatcacttt ggttgtgaaa aaggaggtgc taatctcatt
4441 aaagaattaa ttgatgattt catctttccc gcatccaaag tttacctgca gtatttaaga
4501 agtggagaac taccagctga gcaggctatt ccagtctgta gttcacccgt taccatcaat
4561 gccggttttg agctacttgt agcattagct attggctgtg tgaggaatct caaacagata
4621 gtagactgtt tgactgaaat gtattacatg ggcacagcaa ttactacttg tgaagcactt
4681 actgagtggg aatatctgcc ccctgttgga ccccgcccac caaaaggatt tgtgggactc
4741 aaaaatgctg gtgctacgtg ttacatgaac tctgtgatcc agcagctata catgattcct
4801 tctatcagga acagtattct tgcaattgaa ggcacaggta gtgatttaca cgatgatatg
4861 ttcggggatg agaagcagga cagtgagagt aatgttgatc cccgagatga tgtatttgga
4921 tatcctcatc aatttgaaga caagccagca ttaagtaaga cagaagatag gaaagagtat
4981 aatattggtg tcctaagaca ccttcaggtc atctttggtc atttagctgc ttcccaacta
5041 caatactatg tacccagagg attttggaaa cagttcaggc tttggggtga acctgttaat
5101 ctccgtgaac aacatgatgc cttagagttt tttaattctt tggtggatag tttagatgaa
5161 gctttaaaag ctttaggaca cccggctata ctaagtaaag tcctaggagg ctcctttgct
5221 gatcagaaga tctgccaggg ctgcccacat aggtttgaat gtgaagaatc ttttacaact
5281 ttgaatgtgg atattagaaa tcatcaaaat cttcttgact ctttggaaca gtatatcaaa
5341 ggagatttat tggaaggtgc aaatgcatat cattgtgaaa aatgtgataa aaaggttgac
5401 acagtaaagc gcctgctaat taaaaaattg cctcgggttc ttgctatcca actcaaacga
5461 tttgactatg actgggaaag agaatgtgca attaaattca atgattattt tgaatttcct
5521 cgagagctgg atatgggacc ttacacagta gcaggtgttg caaacctgga aagggataat
5581 gtaaactcag aaaatgagtt gattgaacag aaagagcagt ctgacaatga aactgcagga
5641 ggcacaaagt acagacttgt aggagtgctt gtacacagtg gtcaagcaag cggtgggcat
5701 tattattctt acatcattca aaggaatggt aaagatgatc agacagatca ctggtataaa
5761 tttgatgatg gagatgtaac agaatgcaaa atggatgatg atgaagaaat gaaaaatcag
5821 tgttttggtg gagagtacat gggagaagta tttgatcaca tgatgaagcg catgtcatat
5881 aggcgacaga agaggtggtg gaatgcttac ataccttttt atgaacaaat ggatatgata
5941 gatgaagatg atgagatgat aagatacata tcagagctaa ctattgcaag accccatcag
6001 atcattatgt caccagccat tgagagaagt gtacggaaac aaaatgtgaa atttatgcat
6061 aaccgattgc aatatagttt agagtatttt cagtttgtga aaaaactgct tacatgtaat
6121 ggtgtttatt taaaccctgc tccagggcag gattatttgt tgcctgaagc agaagaaatt
6181 actatgatta gtattcagct tgctgctaga ttcctcttta ccactggatt tcacaccaag
6241 aaaatagttc gtggtcctgc cagtgactgg tatgatgcac tgtgcgttct tctccgtcac
6301 agcaaaaatg tacgtttttg gtttactcat aatgtccttt ttaatgtatc aaatcgcttc
6361 tctgaatacc tcctggagtg ccctagtgca gaagtgaggg gtgcatttgc aaaacttata
6421 gtgtttattg cacacttttc cttgcaagat gggtcttgtc cttctccttt tgcatctcca
6481 ggaccttcta gtcaggcatg tgataacttg agcttgagtg accacttact aagagccaca
6541 ctaaatctct tgagaaggga agtttcagag catggacatc atttacagca atattttaat
6601 ttgtttgtaa tgtatgccaa tttaggtgtg gcagaaaaaa cacagcttct gaaattgaat
6661 gtacctgcta cctttatgct tgtgtcttta gacgagggac caggtcctcc aatcaaatat
6721 cagtatgctg aattaggcaa gttatattca gtagtgtctc agctgattcg ttgttgcaat
6781 gtgtcatcaa caatgcagtc ttcaatcaat ggtaatcccc ctctccccaa tcctttcggt
6841 gaccttaatt tatcacagcc tataatgcca attcagcaga atgtgttaga cattttattt
6901 gtgagaacaa gttatgtgaa gaaaattatt gaagactgca gtaactcaga ggataccatc
6961 aaattacttc gcttttgctc ttgggagaat cctcagttct catctactgt cctcagcgaa
7021 cttctctggc aggttgcata ttcatatacc tatgaacttc ggccatattt agatctactt
7081 ttccaaattt tactgattga ggactcctgg cagactcaca gaattcataa tgcacttaaa
7141 ggaattccag atgacagaga tgggctgttc gatacaatac agcgctcgaa gaatcactat
7201 caaaaacgag catatcagtg cataaaatgt atggtagctc tatttagcag ttgtcctgtt
7261 gcttaccaga tcttacaggg taacggagat cttaaaagaa aatggacctg ggcagtggaa
7321 tggctaggag atgaacttga aagaagacca tatactggca atcctcagta tagttacaac
7381 aattggtctc ctccagtaca aagcaatgaa acagcaaatg gttatttctt agaaagatca
7441 catagtgcta ggatgacact tgcaaaagct tgtgaactct gtccagaaga ggagccagat
7501 gaccaggatg ccccagatga gcatgagccc tctccatcag aagatgcccc attatatcct
7561 cattcacctg cctctcagta tcaacagaat aatcatgtac atggacagcc atatacagga
7621 ccagcagcac atcacttgaa caaccctcag aaaacaggcc aacgaacaca agaaaattat
7681 gaaggcaatg aagaagtatc ctcacctcag atgaaggatc agtgaaaagc aataattaac
7741 tgcttccttt atgactatgc actaaggtct tatagtccaa actttctctg tgtctggcta
7801 gtattgaaaa ctagataaac tgctccaaac caacatggag taaagagcat attcactggt
7861 ttatttgcag taatttgcaa tttgtcagtg tataagacac atgcagggtg aagtgtacag
7921 agttttgtaa ca
//