LOCUS Y11710 2823 bp mRNA linear HUM 21-OCT-2008
DEFINITION H.sapiens mRNA for extracellular matrix protein collagen type XIV,
C-terminus.
ACCESSION Y11710
VERSION Y11710.1
KEYWORDS collagen type XIV; extracellular matrix protein.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1
AUTHORS Bauer M., Dieterich W., Ehnis T., Schuppan D.
TITLE Complete primary structure of human collagen type XIV (undulin)
JOURNAL Biochim. Biophys. Acta 1354(3), 183-188(1997).
PUBMED 9427527
REFERENCE 2 (bases 1 to 2823)
AUTHORS Bauer M.
JOURNAL Submitted (10-MAR-1997) to the INSDC. M. Bauer, Klinikum Benjamin
Franklin, FU Berlin, Gastroenterology, Lab. Dr. Schuppan,
Hindenburgdamm 30, Berlin, 12200, FRG
COMMENT Related sequences: M64108, M64109
FEATURES Location/Qualifiers
source 1..2823
/db_xref="H-InvDB:HIT000325672"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
CDS <1..2270
/codon_start=3
/product="collagen type XIV"
/db_xref="GOA:Q05707"
/db_xref="H-InvDB:HIT000325672.14"
/db_xref="HGNC:HGNC:2191"
/db_xref="InterPro:IPR001791"
/db_xref="InterPro:IPR002035"
/db_xref="InterPro:IPR003961"
/db_xref="InterPro:IPR008160"
/db_xref="InterPro:IPR013320"
/db_xref="InterPro:IPR013783"
/db_xref="InterPro:IPR036116"
/db_xref="InterPro:IPR036465"
/db_xref="UniProtKB/Swiss-Prot:Q05707"
/experiment="experimental evidence, no additional details
recorded"
/protein_id="CAA72402.1"
/translation="CKAAKADLVFMVDGSWSIGDENFNKIISFLYSTVGALNKIGTDG
TQVAMVQFTDDPRTEFKLNAYKTKETLLDAIKHISYKGGNTKTGKAIKYVRDTLFTAE
SGTRRGIPKVIVVITDGRSQDDVNKISREMQLDGYSIFAIGVADADYSELVSIGSKPS
ARHVFFVDDFDAFKKIEDELITFVCETASATCPVVHKDGIDLAGFKMMEMFGLVEKDF
SSVEGVSMEPGTFNVFPCYQLHKDALVSQPTRYLHPEGLPSDYTISFLFRILPDTPQE
PFALWEILNKNSDPLVGVILDNGGKTLTYFNYDQSGDFQTVTFEGPEIRKIFYGSFHK
LHIVVSETLVKVVIDCKQVGEKAMNASANITSDGVEVLGKMVRSRGPGGNSAPFQLQM
FDIVCSTSWANTDKCCELPGLRDDESCPDLPHSCSCSETNEVALGPAGPPGGPGLRGP
KGQQGEPGPKGPDGPRGEIGLPGPQGPPGPQGPSGLSIQGMPGMPGEKGEKGDTGLPG
PQGIPGGVGSPGRDGSPGQRGLPGKDGSSGPPGPPGPIGIPGTPGVPGITGSMGPQGA
LGPPGVPGAKGERGERGDLQSQAMVRSVARQVCEQLIQSHMARYTAILNQIPSHSSSI
RTVQGPPGEPGRPGSPGAPGEQGPPGTPGFPGNAGVPGTPGERGLTGIKGEKGNPGVG
TQGPRGPPGPAGPSGESRPGSPGPPGSPGPRGPPGHLGVPGPQGPSGQPGYCDPSSCS
AYGVRDLIPYNDYQH"
mRNA <1..>2823
/experiment="experimental evidence, no additional details
recorded"
regulatory 2591..2596
/note="optional used"
/experiment="experimental evidence, no additional details
recorded"
/regulatory_class="polyA_signal_sequence"
regulatory 2800..2805
/experiment="experimental evidence, no additional details
recorded"
/regulatory_class="polyA_signal_sequence"
BASE COUNT 753 a 705 c 683 g 682 t
ORIGIN
1 tatgtaaggc ggccaaggct gacctggtat ttatggtgga tggatcctgg agcattggag
61 atgaaaattt caataagatc atcagctttc tatacagcac tgttggagcc ctgaacaaga
121 ttggcacaga tggaacccaa gttgcaatgg ttcagttcac tgatgatccc agaacagaat
181 ttaaactaaa tgcttacaaa accaaagaga ctcttcttga tgcaattaaa cacatttcat
241 acaaaggagg aaatacaaaa acaggaaaag caattaagta tgttcgagat accttgttca
301 ctgcagagtc aggtacaaga aggggcatcc caaaggttat cgtggttata actgatggaa
361 gatcacaaga tgatgtgaac aaaatctcca gggagatgca attagatggc tatagcattt
421 ttgcaattgg tgtggccgat gcagattact cggagttggt tagcattggc agtaagccca
481 gcgcacgcca tgtcttcttt gtggatgact ttgacgcctt taagaaaatc gaagatgagt
541 taattacttt tgtctgcgaa acagcatcag caacctgtcc agtggtacac aaggatggca
601 ttgatcttgc aggatttaag atgatggaaa tgtttggttt ggttgaaaaa gatttttcat
661 cagtggaagg ggtttctatg gagcctggta ccttcaatgt gtttccatgt taccaactcc
721 ataaagatgc cctggtttcc cagccaacca ggtacttgca cccagaagga ttgccctccg
781 actacacaat cagttttcta ttccggattc ttcctgacac tccacaggag ccatttgctc
841 tttgggagat tttaaataaa aattctgacc cattggttgg ggttatttta gacaatggtg
901 ggaaaactct aacatatttc aactatgacc agagtgggga ttttcaaact gttactttcg
961 aaggacctga aattaggaaa attttttatg gaagctttca caagctacac attgttgtca
1021 gtgagacttt ggtcaaagtg gttattgact gcaagcaagt gggtgagaag gcaatgaacg
1081 catcagctaa tatcacgtca gatggtgtag aagtgctagg gaaaatggtt cgatcaagag
1141 gaccaggtgg aaactctgca ccgttccagt tacagatgtt tgatattgtt tgctccacat
1201 catgggccaa tacagacaaa tgctgtgaac ttccaggcct gagagatgat gagtcttgcc
1261 cagaccttcc ccattcctgc tcctgttctg aaaccaatga agtggctctg ggaccagcgg
1321 gcccaccagg tggtccagga ctccgaggac caaagggcca gcaaggtgaa ccgggtccaa
1381 agggaccaga tggccctcgg ggtgaaattg gtctgccagg acctcagggt ccacctggac
1441 ctcaaggacc aagtggtctg tccattcaag gaatgcccgg aatgccagga gaaaaaggag
1501 agaaaggaga tactggcctt ccaggtccac agggtatccc aggaggcgtt ggttcaccag
1561 gacgtgatgg ctcaccaggc cagaggggcc ttccgggaaa ggatggatcc tcgggacctc
1621 caggaccacc agggccaata ggcattcctg gcacccctgg agtcccaggg atcacaggaa
1681 gcatgggacc gcaaggcgcc ctgggaccac ctggtgtccc tggagcaaag ggggaacgag
1741 gagagcgggg tgacctgcag tctcaagcca tggtgagatc agtggcgcgt caagtatgcg
1801 aacagctcat ccagagtcac atggccaggt acactgccat cctcaaccag attcccagcc
1861 actcctcatc catccggact gtccaagggc ctcctgggga gcctgggagg ccaggctcac
1921 ctggagcccc tggtgaacaa ggacccccag gaacaccagg cttccccgga aatgcaggcg
1981 taccagggac cccaggagaa cgaggtctaa ctggtatcaa aggagaaaaa ggaaatccag
2041 gcgttggaac ccaaggtcca agaggccccc ctggaccagc aggaccttca ggggagagtc
2101 ggcctggcag ccctgggccc cctggctctc ctggaccaag aggcccacca ggtcatctgg
2161 gggttcctgg accccaaggt ccttctggcc agcctggata ttgtgacccc tcatcatgtt
2221 ctgcctatgg tgtgagagat ctgatcccct acaatgatta ccagcactga agtggaaatc
2281 ctccactctg gttccattgg ccccagacat ttagctgtgg atacagaact gtcctgtcaa
2341 ccaccaccac caccaagccc ctgcccctaa caatggacac tctgcttccc tgcttcttct
2401 gcatccctgc cttcccactt tcaaacctct tgcccactct gctccaaaca tgatggagtg
2461 ataacatcgg aacttaacca aatcatatat gtctatttta atagacactg actgctccat
2521 gtcagcctgg atagaggtat atgacgtgtg ccaagaattt atcccagact cccctgtgtg
2581 acagcttcat aataaagtta cttaactgtg cctcttcctc cttcctctcc ccacacagga
2641 tggatgggca tctttctcct tgaccaccct actctccctt cctcccctga tcacctcccc
2701 tccctgctct cccctggtga tggacttcta acatgagatt tttttaaaaa atttctattt
2761 cttttataat tttgctgagt tttcagggtt tcttctgtaa ataaaacata atatttaaaa
2821 aaa
//