LOCUS Y08612 2378 bp mRNA linear HUM 07-OCT-2008
DEFINITION Homo sapiens mRNA for nuclear pore complex protein 88 (Nup88 gene).
ACCESSION Y08612
VERSION Y08612.2
KEYWORDS nuclear pore complex protein; Nup88 gene.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1
AUTHORS Fornerod M., van Deursen J.M., van Baal S., Reynolds A., Davis D.,
Murti K.G., Fransen J., Grosveld G.
TITLE The human homologue of yeast CRM1 is in a dynamic subcomplex with
CAN/Nup214 and a novel nuclear pore component Nup88
JOURNAL EMBO J. 16(4), 807-816(1997).
PUBMED 9049309
REFERENCE 2
AUTHORS Fornerod M.
JOURNAL Submitted (02-OCT-1996) to the INSDC. M. Fornerod, St. Jude
Children's Research Hospital, Department of Genetics, 332 N.
Lauderdale, Memphis, TN 38105, USA
REMARK Revised by [3]
REFERENCE 3 (bases 1 to 2378)
AUTHORS Fornerod M.
JOURNAL Submitted (19-JUL-1999) to the INSDC. M. Fornerod, St. Jude
Children's Research Hospital, Department of Genetics, 332 N.
Lauderdale, Memphis, TN 38105, USA
FEATURES Location/Qualifiers
source 1..2378
/db_xref="H-InvDB:HIT000325459"
/organism="Homo sapiens"
/chromosome="17"
/map="17p13"
/mol_type="mRNA"
/dev_stage="adult"
/clone_lib="CloneTech Hu2002B#29203"
/tissue_type="placenta"
/germline
/db_xref="taxon:9606"
CDS 49..2274
/gene="Nup88"
/product="88kDa nuclear pore complex protein"
/db_xref="GOA:Q99567"
/db_xref="H-InvDB:HIT000325459.12"
/db_xref="HGNC:HGNC:8067"
/db_xref="InterPro:IPR019321"
/db_xref="InterPro:IPR037700"
/db_xref="UniProtKB/Swiss-Prot:Q99567"
/protein_id="CAA69904.1"
/translation="MAAAEGPVGDGELWQTWLPNHVVFLRLREGLKNQSPTEAEKPAS
SSLPSSPPPQLLTRNVVFGLGGELFLWDGEDSSFLVVRLRGPSGGGEEPALSQYQRLL
CINPPLFEIYQVLLSPTQHHVALIGIKGLMVLELPKRWGKNSEFEGGKSTVNCSTTPV
AERFFTSSTSLTLKHAAWYPSEILDPHVVLLTSDNVIRIYSLREPQTPTNVIILSEAE
EESLVLNKGRAYTASLGETAVAFDFGPLDAVPKTLFGQNGKDEVVAYPLYILYENGET
FLTYISLLHSPGNIWKAVGSIAHASAAEDNYGYDACAVLCLPCVPNILVIATESGMLY
HCVVLEGEEEDDHTSEKSWDSRIDLIPSLYVFECVELELALKLASGEDDPFDSDFSCP
VKLHRDPKCPSRYHCTHEAGVHSVGLTWIHKLHKFLGSDEEDKDSLQELSTEQKCFVE
HILCTRPLPCRQPAPIRGFWIVPDILGPTMICITSTYECLIWPLLSTVHPASPPLLCT
REDVEVAESSLRVLAETPDSFEKHIRSILQRSVANPAFLKASEKDIAPPPEECLQLLS
RATQVFREQYILKQDLAKEEIQRRVKLLCDQKKKQLEDLSYCREERKSLREMAERLAD
KYEEAKEKQEDIMNRMKKLLHSFHSELPVLSDSERDMKKELQLIPDQLRHLGNAIKQV
TMKKDYQQQKMEKVLSLPKPTIILSAYQRKCIQSILKEEGEHIREMVKQINDIRNHVN
F"
regulatory 2360..2364
/regulatory_class="polyA_signal_sequence"
BASE COUNT 697 a 533 c 553 g 595 t
ORIGIN
1 gataaaccca caagacacaa aacatacctt tcgagcagtt gggccaagat ggcggccgcc
61 gagggaccgg tgggcgacgg cgagctgtgg cagacctggc ttcctaacca cgtcgtgttc
121 ttgcggctcc gggagggact gaaaaaccag agtccaaccg aagctgagaa accagcttct
181 tcgtcgttgc cttcgtcgcc gccgccgcag ttgctgacga gaaacgtggt ctttggcctc
241 ggcggagagc ttttcctgtg ggacggagaa gacagctcct tcttagtcgt tcgccttcgg
301 ggccccagcg gcggcggcga agagcccgcc ctgtcccagt accagagatt gctttgcata
361 aatccacccc tgtttgaaat ctatcaagtc ttgttaagcc caacacaaca tcatgtagca
421 cttataggaa taaaaggact tatggtatta gaattaccta aaagatgggg gaagaattct
481 gaatttgaag gtggaaaatc aacagtgaat tgtagtacca ctccagttgc ggagagattt
541 ttcaccagtt ccacctctct gactctaaag catgctgcat ggtatccaag tgaaatcctg
601 gatccccacg tagtgctgtt aacatcagac aacgtaatca gaatttactc tctacgtgag
661 ccgcagacac ccactaacgt gataatactt tcagaagccg aagaggaaag tctagtactc
721 aataaaggaa gggcgtatac cgcatctcta ggagagacag cagttgcatt tgactttggg
781 ccattggacg cagtcccaaa gactctattt ggacaaaacg gcaaagatga agtagtggca
841 tacccactgt acatcttata tgaaaatgga gagactttcc tgacatacat cagtctgtta
901 cacagccctg gaaatatttg gaaagctgtt gggtccattg cccatgcatc tgcggctgaa
961 gataactatg gttatgatgc gtgtgctgta ctctgcttac cctgtgtccc caatatctta
1021 gtgatcgcta ctgaatcagg aatgctgtat cactgtgtcg tgctagaagg ggaagaagaa
1081 gatgaccaca cgtcagaaaa gtcctgggat tccaggattg acctcattcc ttctctgtat
1141 gtgtttgaat gtgttgagtt ggagcttgct ttgaaactgg catctggaga ggatgaccct
1201 tttgattctg acttttcttg tccagtcaaa cttcatagag atcccaagtg tccttcaaga
1261 tatcactgta ctcatgaagc tggtgtacat agtgttgggc taacttggat tcataaactt
1321 cacaaatttc ttggatcaga tgaagaagat aaggatagtt tacaggaact ctctacagaa
1381 cagaaatgct ttgttgaaca catcctttgt acgaggccat tgccctgcag gcagccagct
1441 ccaattcgag gattttggat tgtacctgac attctgggac ccacgatgat ctgcatcacc
1501 agtacctatg aatgcctcat atggccgtta ttaagtacag tccatccagc gtctcctccc
1561 ctgctttgta ctcgagaaga tgttgaagtg gcagagtctt ccctccgtgt tctggctgaa
1621 accccagatt cctttgaaaa gcatattaga agcattttgc aacgtagtgt tgccaatcca
1681 gcatttttga aagcttctga aaaggacata gcccctcctc ctgaagaatg ccttcagctc
1741 ctcagcagag ccacccaggt gttcagagag cagtacattc tcaaacagga cttggcaaag
1801 gaggagattc agcggagggt caaattatta tgtgaccaaa aaaagaaaca actagaagat
1861 ctcagttatt gtcgagaaga gaggaaaagt ctgcgggaaa tggctgagcg tttagctgac
1921 aaatatgagg aagctaaaga aaaacaagag gatatcatga acaggatgaa aaaactactt
1981 cacagttttc actctgagct cccagttctc tctgatagtg agcgagacat gaagaaagaa
2041 ttacagctga tacctgatca acttcgacat ttgggcaatg ccatcaaaca ggttactatg
2101 aaaaaggatt atcaacagca aaagatggag aaggtgttga gtcttccaaa acccaccatt
2161 attctcagtg cctaccagcg aaagtgcatt cagtccatcc tgaaagagga gggtgaacat
2221 ataagggaaa tggtgaagca aatcaatgat atccgcaatc atgtaaactt ctgacaccac
2281 caggagctga ctcacacctg aactgaacac cattgaaggc ttaaacccat attgtaaaac
2341 aggtagaatt atctaattta taaaaaggtg ttttgatg
//