LOCUS Y08565 1869 bp mRNA linear HUM 07-OCT-2008
DEFINITION Homo sapiens mRNA for UDP-GalNAc:polypeptide
N-acetylgalactosaminyltransferase (GalNAc-T6 gene).
ACCESSION Y08565
VERSION Y08565.1
KEYWORDS GalNAc-T6 gene; UDP-GalNAc:polypeptide
N-acetylgalactosaminyltransferase.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 2
AUTHORS Bennett E.P.
JOURNAL Submitted (01-OCT-1996) to the INSDC. E.P. Bennett, Dental School,
University Of Copenhagen, Norre Alle 20, 2200 Copenhagen N, DENMARK
REMARK Revised by [3]
REFERENCE 3 (bases 1 to 1869)
AUTHORS Bennett E.P.
JOURNAL Submitted (08-APR-1997) to the INSDC. E.P. Bennett, Dental School,
University Of Copenhagen, Norre Alle 20, 2200 Copenhagen N, DENMARK
REFERENCE 4
AUTHORS Bennett E.P., Hassan H., Mandel U., Hollingsworth M.A., Akisawa N.,
Ikematsu Y., Merkx G., Geurts van Kessel A., Olofsson S.,
Clausen H.
TITLE Cloning and characterization of a close homologue of human
UDP-N-acetyl-alpha-D-galactosamine:Polypeptide
N-acetylgalactosaminyltransferase-T3, designated GalNAc-T6.
Evidence for genetic but not functional redundancy
JOURNAL J Biol Chem 274(36), 25362-25370(1999).
PUBMED 10464263
FEATURES Location/Qualifiers
source 1..1869
/db_xref="H-InvDB:HIT000325456"
/organism="Homo sapiens"
/mol_type="mRNA"
/cell_line="MKN45"
/tissue_type="gastric"
/db_xref="taxon:9606"
CDS 1..1869
/gene="GalNAc-T6"
/product="UDP-GalNAc:polypeptide
N-acetylgalactosaminyltransferase"
/db_xref="GOA:Q8NCL4"
/db_xref="H-InvDB:HIT000325456.11"
/db_xref="HGNC:HGNC:4128"
/db_xref="InterPro:IPR000772"
/db_xref="InterPro:IPR001173"
/db_xref="InterPro:IPR029044"
/db_xref="InterPro:IPR035992"
/db_xref="UniProtKB/Swiss-Prot:Q8NCL4"
/protein_id="CAA69876.1"
/translation="MRLLRRRHMPLRLAMVGCAFVLFLFLLHRDVSSREEATEKPWLK
SLVSRKDHVLDLMLEAMNNLRDSMPKLQIRAPEAQQTLFSINQSCLPGFYTPAELKPF
WERPPQDPNAPGADGKAFQKSKWTPLETQEKEEGYKKHCFNAFASDRISLQRSLGPDT
RPPECVDQKFRRCPPLATTSVIIVFHNEAWSTLLRTVYSVLHTTPAILLKEIILVDDA
STEEHLKEKLEQYVKQLQVVRVVRQEERKGLITARLLGASVAQAEVLTFLDAHCECFH
GWLEPLLARIAEDKTVVVSPDIVTIDLNTFEFAKPVQRGRVHSRGNFDWSLTFGWETL
PPHEKQRRKDETYPIKSPTFAGGLFSIPKSYFEHIGTYDNQMEIWGGENVEMSFRVWQ
CGGQLEIIPCSVVGHVFRTKSPHTFPKGTSVIARNQVRLAEVWMDSYKKIFYRRNLQA
AKMAQEKSFGDISERLQLREQLHCHNFSWYLHNVYPEMFVPDLTPTFYGAIKNLGTNQ
CLDVGENNRGGKPLIMYSCHGLGGNQYFEYTTQRDLRHNIAKQLCLHVSKGALGLGSC
HFTGKNSQVPKDEEWELAQDQLIRNSGSGTCLTSQDKKPAMAPCNPSDPHQLWLFV"
BASE COUNT 439 a 549 c 521 g 360 t
ORIGIN
1 atgaggctcc tccgcagacg ccacatgccc ctgcgcctgg ccatggtggg ctgcgccttt
61 gtgctcttcc tcttcctcct gcatagggat gtgagcagca gagaggaggc cacagagaag
121 ccgtggctga agtccctggt gagccggaag gatcacgtcc tggacctcat gctggaggcc
181 atgaacaacc ttagagattc aatgcccaag ctccaaatca gggctccaga agcccagcag
241 actctgttct ccataaacca gtcctgcctc cctgggttct ataccccagc tgaactgaag
301 cccttctggg aacggccacc acaggacccc aatgcccctg gggcagatgg aaaagcattt
361 cagaagagca agtggacccc cctggagacc caggaaaagg aagaaggcta taagaagcac
421 tgtttcaatg cctttgccag cgaccggatc tccctgcaga ggtccctggg gccagacacc
481 cgaccacctg agtgtgtgga ccagaagttc cggcgctgcc ccccactggc caccaccagc
541 gtgatcattg tgttccacaa cgaagcctgg tccacactgc tgcgaacagt gtacagcgtc
601 ctacacacca cccctgccat cttgctcaag gagatcatac tggtggatga tgccagcaca
661 gaggagcacc taaaggagaa gctggagcag tacgtgaagc agctgcaggt ggtgagggtg
721 gtgcggcagg aggagcggaa ggggttgatc accgcccggc tgctgggggc cagcgtggca
781 caggcggagg tgctcacgtt cctggatgcc cactgtgagt gcttccacgg ctggctggag
841 cccctcctgg ctcgaatcgc tgaggacaag acagtggtgg tgagcccaga catcgtcacc
901 atcgacctta atacttttga gttcgccaag cccgtccaga ggggcagagt ccatagccga
961 ggcaactttg actggagcct gaccttcggc tgggaaacac ttcctccaca tgagaagcag
1021 aggcgcaagg atgaaacata ccccatcaaa tccccgacgt ttgctggtgg cctcttctcc
1081 atccccaagt cctactttga gcacatcggt acctatgata atcagatgga gatctgggga
1141 ggggagaacg tggaaatgtc cttccgggtg tggcagtgtg ggggccagct ggagatcatc
1201 ccctgctctg tcgtaggcca tgtgttccgg accaagagcc cccacacctt ccccaagggc
1261 actagtgtca ttgctcgcaa tcaagtgcgc ctggcagagg tctggatgga cagctacaag
1321 aagattttct ataggagaaa tctgcaggca gcaaagatgg cccaagagaa atccttcggt
1381 gacatttcgg aacgactgca gctgagggaa caactgcact gtcacaactt ttcctggtac
1441 ctgcacaatg tctacccaga gatgtttgtt cctgacctga cgcccacctt ctatggtgcc
1501 atcaagaacc tcggcaccaa ccaatgcctg gatgtgggtg agaacaaccg cggggggaag
1561 cccctcatca tgtactcctg ccacggcctt ggcggcaacc agtactttga gtacacaact
1621 cagagggacc ttcgccacaa catcgcaaag cagctgtgtc tacatgtcag caagggtgct
1681 ctgggccttg ggagctgtca cttcactggc aagaatagcc aggtccccaa ggacgaggaa
1741 tgggaattgg cccaggatca gctcatcagg aactcaggat ctggtacctg cctgacatcc
1801 caggacaaaa agccagccat ggccccctgc aatcccagtg acccccatca gttgtggctc
1861 tttgtctag
//