LOCUS       X98085                  4738 bp    mRNA    linear   HUM 21-OCT-2008
DEFINITION  H.sapiens mRNA for tenascin-R.
ACCESSION   X98085
VERSION     X98085.1
KEYWORDS    tenascin-R.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1
  AUTHORS   Williams H., Schachner M., Wang B., Goodfellow P., Kenwrick S.
  TITLE     Isolation of the gene for neural cell adhesion molecule tenascin-R
            and fine mapping relative to loci in 1q25-31
  JOURNAL   Unpublished.
REFERENCE   2  (bases 1 to 4738)
  AUTHORS   Williams H.
  JOURNAL   Submitted (22-MAY-1996) to the INSDC. H. Williams, Cambridge
            University, Medicine, Level 5, Addenbrookes Hospital, Hills Road,
            Cambridge, CB2 2QQ, UK
FEATURES             Location/Qualifiers
     source          1..4738
                     /db_xref="H-InvDB:HIT000325034"
                     /organism="Homo sapiens"
                     /chromosome="1"
                     /map="q25-31"
                     /mol_type="mRNA"
                     /dev_stage="14 week foetus"
                     /clone_lib="lambda gt10 and gt11"
                     /clone="pBluescript"
                     /tissue_type="brain"
                     /germline
                     /db_xref="taxon:9606"
     CDS             118..4194
                     /product="tenascin-R"
                     /db_xref="GOA:Q92752"
                     /db_xref="H-InvDB:HIT000325034.13"
                     /db_xref="HGNC:HGNC:11953"
                     /db_xref="InterPro:IPR000742"
                     /db_xref="InterPro:IPR002181"
                     /db_xref="InterPro:IPR003961"
                     /db_xref="InterPro:IPR013032"
                     /db_xref="InterPro:IPR013111"
                     /db_xref="InterPro:IPR013783"
                     /db_xref="InterPro:IPR033079"
                     /db_xref="InterPro:IPR036056"
                     /db_xref="InterPro:IPR036116"
                     /db_xref="InterPro:IPR041161"
                     /db_xref="UniProtKB/Swiss-Prot:Q92752"
                     /protein_id="CAA66709.1"
                     /translation="MGADGETVVLKNMLIGVNLILLGSMIKPSECQLEVTTERVQRQS
                     VEEEGGIANYNTSSKEQPVVFNHVYNINVPLDNLCSSGLEASAEQEVSAEDETLAEYM
                     GQTSDHESQVTFTHRINFPKKACPCASSAQVLQELLSRIEMLEREVSVLRDQCNANCC
                     QESAATGQLDYIPHCSGHGNFSFESCGCICNEGWFGKNCSEPYCPLGCSSRGVCVDGQ
                     CICDSEYSGDDCSELRCPTDCSSRGLCVDGECVCEEPYTGEDCRELRCPGDCSGKGRC
                     ANGTCLCEEGYVGEDCGQRQCLNACSGRGQCEEGLCVCEEGYQGPDCSAVAPPEDLRV
                     AGISDRSIELEWDGPMAVTEYVISYQPTALGGLQLQQRVPGDWSGVTITELEPGLTYN
                     ISVYAVISNILSLPITAKVATHLSTPQGLQFKTITETTVEVQWEPFSFSFDGWEISFI
                     PKNNEGGVIAQVPSDVTSFNQTGLKPGEEYIVNVVALKEQARSPPTSASVSTVIDGPT
                     QILVRDVSDTVAFVEWIPPRAKVDFILLKYGLVGGEGGRTTFRLQPPLSQYSVQALRP
                     GSRYEVSVSAVRGTNESDSATTQFTTEIDAPKNLRVGSRTATSLDLEWDNSEAEVQEY
                     KVVYITLAGEQYHEVLVPRGIGPTTRATLTDLVPGTEYGVGISAVMNSQQSVPATMNA
                     RTELDSPRDLMVTASSETSISLIWTKASGPIDHYRITFTPSSGIASEVTVPKDRTSYT
                     LTDLEPGAEYIISVTAERGRQQSLESTVDAFTGFRPISHLHFSHVTSSSVNITWSDPS
                     PPADRLILNYSPRDEEEEMMEVSLDATKRHAVLMGLQPATEYIVNLVAVHGTVTSEPI
                     VGSITTGIDPPKDITISNVTKDSVMVSWSPPVASFDYYRVSYRPTQVGRLDSSVVPNT
                     VTEFTITRLNPATEYEISLNSVRGREESERICTLVHTAMDNPVDLIATNITPTEALLQ
                     WKAPVGEVENYVIVLTHFAVAGETILVDGVSEEFRLVDLLPSTHYTATMYATNGPLTS
                     GTISTNFSTLLDPPANLTASEVTRQSALISWQPPRAEIENYVLTYKSTDGSRKELIVD
                     AEDTWIRLEGLLENTDYTVLLQAAQDTTWSSITSTAFTTGGRVFPHPQDCAQHLMNGD
                     TLSGVYPIFLNGELSQKLQVYCDMTTDGGGWIVFQRRQNGQTDFFRKWADYRVGFGNV
                     EDEFWLGLDNIHRITSQGRYELRVDMRDGQEAAFASYDRFSVEDSRNLYKLRIGSYNG
                     TAGDSLSYHQGRPFSTEDRDNDVAVTNCAMSYKGAWWYKNCHRTNLNGKYGESRHSQG
                     INWYHWKGHEFSIPFVEMKMRPYNHRLMAGRKRQSLQF"
BASE COUNT         1135 a         1308 c         1289 g         1006 t
ORIGIN      
        1 taggattaaa gaaagtgcag taaagagaaa gcatgaagac accatcacaa acagattccc
       61 acaactccat gctgtgtgct gcaggctggt cctgaaccca gatctctggc tgagaggatg
      121 ggggcagatg gggaaacagt ggttctgaag aacatgctca ttggcgtcaa cctgatcctt
      181 ctgggctcca tgatcaagcc ttcagagtgt cagctggagg tcaccacaga aagggtccag
      241 agacagtcag tggaggagga gggaggcatt gccaactaca acacgtccag caaagagcag
      301 cctgtggtct tcaaccacgt gtacaacatt aacgtgccct tggacaacct ctgctcctca
      361 gggctagagg cctctgctga gcaggaggtg agtgcagaag acgagactct ggcagagtac
      421 atgggccaga cctcagacca cgagagccag gttaccttta cacacaggat caacttcccc
      481 aaaaaggcct gtccatgtgc cagttcagcc caggtgctgc aggagctgct gagccggatc
      541 gagatgctgg agagggaggt gtcggtgctg cgagaccagt gcaacgccaa ctgctgccaa
      601 gaaagtgctg ccacaggaca actggactat atccctcact gcagcggcca cggcaacttt
      661 agctttgagt cctgtggctg catctgcaac gaaggctggt ttggcaagaa ttgctcggag
      721 ccctactgcc cgctgggttg ctccagccgg ggggtgtgtg tggatggcca gtgcatctgt
      781 gacagcgagt acagcgggga tgactgttcc gaactccggt gcccaacaga ctgcagctcc
      841 cgggggctct gcgtggacgg tgagtgtgtc tgtgaagagc cctacactgg cgaggactgc
      901 agggaactga ggtgccctgg ggactgttcg gggaagggga gatgtgccaa cggtacctgt
      961 ttatgcgagg agggctacgt tggtgaggac tgcggccagc ggcagtgtct gaatgcctgc
     1021 agtgggcgag gacaatgtga ggaggggctc tgcgtctgtg aagagggcta ccagggccct
     1081 gactgctcag cagttgcccc tccagaggac ttgcgagtgg ctggtatcag cgacaggtcc
     1141 attgagctgg aatgggacgg gccgatggca gtgacggaat atgtgatctc ttaccagccg
     1201 acggccctgg ggggcctcca gctccagcag cgggtgcctg gagattggag tggtgtcacc
     1261 atcacggagc tggagccagg tctcacctac aacatcagcg tctacgctgt cattagcaac
     1321 atcctcagcc ttcccatcac tgccaaggtg gccacccatc tctccactcc tcaagggcta
     1381 caatttaaga cgatcacaga gaccaccgtg gaggtgcagt gggagccctt ctcattttcc
     1441 ttcgatgggt gggaaatcag cttcattcca aagaacaatg aagggggagt gattgctcag
     1501 gtccccagcg atgttacgtc ctttaaccag acaggactaa agcctgggga ggaatacatt
     1561 gtcaatgtgg tggctctgaa agaacaggcc cgcagccccc ctacctcggc cagcgtctcc
     1621 acagtcattg acggccccac gcagatcctg gttcgcgatg tctcggacac cgtggctttt
     1681 gtggagtgga ttccccctcg agccaaagtc gatttcattc ttttgaaata tggcctggtg
     1741 ggcggggaag gtgggaggac caccttccgg ctgcagcctc ccctgagcca atactcagtg
     1801 caggccctgc ggcctggctc ccgatacgag gtgtcagtca gtgccgtccg agggaccaac
     1861 gagagcgatt ctgccaccac tcagttcaca acagagatcg atgcccccaa gaacttgcga
     1921 gttggttctc gcacagcaac cagccttgac ctcgagtggg ataacagtga agccgaagtt
     1981 caggagtaca aggttgtgta catcaccctg gcgggtgagc aatatcatga ggtactggtc
     2041 cccaggggca ttggtccaac caccagggcc accctgacag atctggtacc tggcactgag
     2101 tatggagttg gaatatctgc cgtcatgaac tcacagcaaa gcgtgccagc caccatgaat
     2161 gccaggactg aacttgacag tccccgagac ctcatggtga cagcctcctc ggagacctcc
     2221 atctccctca tctggaccaa ggccagtggc cccattgacc actaccgaat tacctttacc
     2281 ccatcctctg ggattgcctc agaagtcacc gtacccaagg acaggacctc atacacacta
     2341 acagatctag agcctggggc agagtacatc atttccgtca ctgctgagag gggtcggcag
     2401 cagagcttgg agtccactgt ggatgctttc acaggcttcc gtcccatctc tcatctgcac
     2461 ttttctcatg tgacctcctc cagtgtgaac atcacttgga gtgatccatc tcccccagca
     2521 gacagactca ttcttaacta cagccccagg gatgaggagg aagagatgat ggaggtctcc
     2581 ctggatgcca ccaagaggca tgctgtcctg atgggcctgc aaccagccac agagtatatt
     2641 gtgaaccttg tggctgtcca tggcacagtg acctctgagc ccattgtggg ctccatcacc
     2701 acaggaattg atcccccaaa agacatcaca attagcaatg tgaccaagga ctcagtgatg
     2761 gtctcctgga gccctcctgt tgcatctttc gattactacc gagtatcata tcgacccacc
     2821 caagtgggac gactagacag ctcagtggtg cccaacactg tgacagaatt caccatcacc
     2881 agactgaacc cagctaccga atacgaaatc agcctcaaca gcgtgcgggg cagggaggaa
     2941 agcgagcgca tctgtactct tgtgcacaca gccatggaca accctgtgga tctgattgct
     3001 accaatatca ctccaacaga agccctgctg cagtggaagg caccagtggg tgaggtggag
     3061 aactacgtca ttgttcttac acactttgca gtcgctggag agaccatcct tgttgacgga
     3121 gtcagtgagg aatttcggct tgttgacctg cttcctagca cccactatac tgccaccatg
     3181 tatgccacca atggacctct caccagtggc accatcagca ccaacttttc tactctcctg
     3241 gaccctccgg caaacctgac agccagtgaa gtcaccagac aaagtgccct gatctcctgg
     3301 cagcctccca gggcagagat tgaaaattat gtcttgacct acaaatccac cgacggaagc
     3361 cgcaaggagc tgattgtgga tgcagaagac acctggattc gactggaggg cctgttggag
     3421 aacacagact acacggtgct cctgcaggca gcacaggaca ccacgtggag cagcatcacc
     3481 tccaccgctt tcaccacagg aggccgggtg ttccctcatc cccaagactg tgcccagcat
     3541 ttgatgaatg gagacacttt gagtggggtt taccccatct tcctcaatgg ggagctgagc
     3601 cagaaattac aagtgtactg tgatatgacc accgacgggg gcggctggat tgtattccag
     3661 aggcggcaga atggccaaac tgattttttc cggaaatggg ctgattaccg tgttggcttc
     3721 gggaacgtgg aggatgagtt ctggctgggg ctggacaata tacacaggat cacatcccag
     3781 ggccgctatg agctgcgcgt ggacatgcgg gatggccagg aggccgcctt cgcctcctac
     3841 gacaggttct ctgtcgagga cagcagaaac ctgtacaaac tccgcatagg aagctacaac
     3901 ggcactgcgg gggactccct cagctatcat caaggacgcc ctttctccac agaggataga
     3961 gacaatgatg ttgcagtgac taactgtgcc atgtcgtaca agggagcatg gtggtataag
     4021 aactgccacc ggaccaacct caatgggaag tacggggagt ccaggcacag tcagggcatc
     4081 aactggtacc attggaaagg ccatgagttc tccatcccct ttgtggaaat gaagatgcgc
     4141 ccctacaacc accgtctcat ggcagggaga aaacggcagt ccttacagtt ctgagcagtg
     4201 ggcggctgca agccaaccaa tattttctgt catttgtttg tattttataa tatgaaacaa
     4261 ggggggaggg taatagcaat gtgttttgca acatattaag agtatgtgga ggaagcaggg
     4321 atgtcgcagg aatccgctgg ctaacatctg ctcttggttt ctgctgccct ggagcctgac
     4381 cctcagtctc cattctccct cctacccagg cctcctcaac cttcacctcc tttcccacca
     4441 aggaggagaa gtaggaagtt ttcttaaagg gccaattcaa agccaagtcg tggggtgcag
     4501 attgttatgg tgacaggcac acacattttt ctacccttct tctgagatgt cctctgcctt
     4561 ccaggtattt gtgattttgt cacagcctga catggccagg ttctcacact ggcccagaga
     4621 aaagagcctc agcaagagag ttttgccaac aattcccctt aaaaggaaac agatcaacta
     4681 caccgcatcc caacaaccca ggttcttttc cttccttcct tccttcctcc cttccttc
//