LOCUS X97999 2130 bp mRNA linear HUM 14-NOV-2006
DEFINITION H.sapiens mRNA for transcription factor IID, subunit TAFII55.
ACCESSION X97999
VERSION X97999.1
KEYWORDS hTAFII55; transcription factor IID.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1
AUTHORS Lavigne A.C., Mengus G., May M., Dubrowskaya V., Tora L.,
Chambon P., Davidson I.
TITLE Multiple interactions between hTAFII55 and other TFIID subunits
JOURNAL J Biol Chem 271(33), 19774-19780(1996).
PUBMED 8702684
REFERENCE 2 (bases 1 to 2130)
AUTHORS Davidson I.B.
JOURNAL Submitted (21-MAY-1996) to the INSDC. I.B. Davidson, IGBMC,
CNRS/INSERM/ULP., 1 Rue Laurent, B.P 163, F- 67404 Illkirch, FRANCE
REFERENCE 3 (bases 1 to 2130)
AUTHORS Chiang C.M., Roeder R.G.
TITLE Cloning of an intrinsic human TFIID subunit that interacts with
multiple transcriptional activators
JOURNAL Science, e1252229 267(5197), 531-536(1995).
PUBMED 7824954
COMMENT Related sequence: U18062
FEATURES Location/Qualifiers
source 1..2130
/db_xref="H-InvDB:HIT000325027"
/organism="Homo sapiens"
/mol_type="mRNA"
/cell_line="HeLa"
/db_xref="taxon:9606"
5'UTR 9..723
misc_difference 108
/replace="a"
/note="conflict"
/citation=[3]
variation 178
/replace="t"
/note="polymorphism"
misc_difference 190
/replace="t"
/note="conflict"
/citation=[3]
CDS 724..1773
/gene="hTAFII55"
/product="transcription factor IID"
/note="subunit TAFII55"
/db_xref="GOA:Q15545"
/db_xref="H-InvDB:HIT000325027.11"
/db_xref="HGNC:HGNC:11541"
/db_xref="InterPro:IPR006751"
/db_xref="InterPro:IPR037817"
/db_xref="PDB:4RGW"
/db_xref="PDB:5FUR"
/db_xref="PDB:6MZL"
/db_xref="PDB:6MZM"
/db_xref="UniProtKB/Swiss-Prot:Q15545"
/protein_id="CAA66636.1"
/translation="MSKSKDDAPHELESQFILRLPPEYASTVRRAVQSGHVNLKDRLT
IELHPDGRHGIVRVDRVPLASKLVDLPCVMESLKTIDKKTFYKTADICQMLVSTVDGD
LYPPVEEPVASTDPKASKKKDKDKEKKFIWNHGITLPLKNVRKRRFRKTAKKKYIESP
DVEKEVKRLLSTDAEAVSTRWEIIAEDETKEAENQGLDISSPGMSGHRQGHDSLEHDE
LREIFNDLSSSSEDEDETQHQDEEDINIIDTEEDLERQLQDKLNESDEQHQENEGTNQ
LVMGIQKQIDNMKGKLQETQDRAKRQEDLIMKVENLALKNRFQAVLDELKQKEDREKE
QLSSLQEELESLLEK"
misc_difference 1257
/replace="g"
/note="conflict"
/citation=[3]
misc_difference 1278
/replace="c"
/note="conflict"
/citation=[3]
misc_difference 1572
/replace="t"
/note="conflict"
/citation=[3]
3'UTR 1774..2130
misc_difference 1975
/replace="c"
/note="conflict"
/citation=[3]
BASE COUNT 637 a 416 c 527 g 550 t
ORIGIN
1 ggaattcccc cggacggagg gccggcgagg tgcggggtct ggtgatgcga gctgcgcctc
61 tcggcaagat ttcgcgctgc ccatcccggg ccctttcatc agtaatcggt agtggatcac
121 tctgccaagc ggcaggaaga attaaggaaa cgacaaggag acgctcggct ctctcccgct
181 tggctccttg cggcctcctc ttcccttcgc tccggcccgg tgaaactgaa cttataatcg
241 tcactggatt gtaagtaccc gaggcgaaga gagctcgctg agccctgatt ttttgagtgt
301 ctttgttccg ggagagtttg tgagttgaaa gtatctctgc tgggctttct gggccgaaaa
361 ccgttccggg ggagccgcca tttgctttcc tgttccctag ctagctagct agctctctcc
421 gcgttgtccg gcagcggcac ctagaggttg ggacttggca ttgcatctga tttaatgaac
481 ttaagtctgt gaataagcct ttgtgttaac gactggtatt cggtcacagc atatttagag
541 aaaagacttg gagcttaaat aaaaactaag gcaaaataga cgcttagctg ctgatctaca
601 gagaacttct tgtaattaaa agatttcaat tcatagcaaa ctggtgtttt aaactattgc
661 agtagctgga actttttagt gtaaccagca tttattggag aagtgaatca caaggaaata
721 aagatgagta aaagcaaaga tgatgctcct cacgaactgg agagccagtt tatcttacgt
781 ctgcctccag aatatgcctc tactgtgaga agggcagtac agtctggtca tgtcaacctc
841 aaggacagac tgacaattga gttacatcct gatgggcgtc atggaatcgt cagagtggac
901 cgtgttccat tggcctcaaa attagtagac ctgccctgtg ttatggaaag cttgaaaacc
961 attgataaaa aaacttttta caagacagct gatatctgtc agatgcttgt atccacagtt
1021 gatggtgatc tctatcctcc tgtggaggag ccagttgcta gcactgatcc taaagcaagc
1081 aagaaaaagg ataaggacaa agagaaaaag tttatctgga accacggaat tactctgcct
1141 ctaaagaatg tcaggaagag aaggttccgg aagacagcaa agaagaaata tattgaatct
1201 ccagatgttg aaaaagaagt gaaacgattg ctgagtacag atgctgaagc tgttagtact
1261 cggtgggaaa taattgcgga agatgaaaca aaggaggcag aaaatcaagg cctggatatc
1321 tcttctccag gaatgtctgg tcacaggcag ggccatgact cattagaaca tgatgagctt
1381 cgggagatat tcaatgacct cagcagcagc agtgaggatg aagatgagac ccagcatcaa
1441 gatgaagaag atataaacat cattgacacg gaggaagatc tggagagaca gctacaggac
1501 aagctaaatg aatcagatga acagcaccag gaaaatgaag gaaccaatca gctggttatg
1561 ggaattcaga agcagattga caacatgaaa ggcaagctcc aagagaccca ggacagggca
1621 aaacgacaag aggatctcat catgaaagtg gaaaatctgg ctctcaagaa cagatttcag
1681 gctgtactgg atgagctcaa acaaaaggaa gaccgagaaa aggagcaact cagctctttg
1741 caagaggagc tagaatcact cctagagaag taaaaagaac tgatatttaa tttcagtctt
1801 cagactggtc agcattagaa aattcttggc tttattgtac tgggtattaa gaccttgctc
1861 ttcctagtcc ttttaatgct gtgtgttctg ttaagttctt tcatttgttt gtaattttgt
1921 ttttcagcaa atttatattg ttttgctagg tgttcatcct ataagaagca ggattgtata
1981 ggcagaaaaa tgattgtagg aaagttgcag gattagcgga atgtatggtt caaccttaat
2041 tatagcttca ttgcaggact ttactgtttc tccattttct agaagctgct gttgctgctt
2101 tgtgatgacg tgagatcaat aagaagaacc
//