LOCUS X97124 1989 bp mRNA linear HUM 07-OCT-2008
DEFINITION H.sapiens mRNA for prcc protein.
ACCESSION X97124
VERSION X97124.1
KEYWORDS prcc gene; translocation associated gene.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1
AUTHORS Sidhar S.K., Clark J., Gill S., Hamoudi R., Crew A.J., Gwilliam R.,
Ross M., Linehan W.M., Birdsall S., Shipley J., Cooper C.S.
TITLE Molecular cloning of the genes involved in the t(x;1)translocation
that causes human papillary renal cell carcinoma
JOURNAL Hum. Mol. Genet. 5(9), 1333-1338(1996).
PUBMED 8872474
REFERENCE 2 (bases 1 to 1989)
AUTHORS Sidhar S.K.
JOURNAL Submitted (04-APR-1996) to the INSDC. S.K. Sidhar, Institute of
Cancer Research, Molecular Carcinogenesis, 15 Cotswold Road,
Sutton, Surrey, SM2 5NG, UK
REMARK Revised by author 11-JUN-96
FEATURES Location/Qualifiers
source 1..1989
/db_xref="H-InvDB:HIT000324973"
/organism="Homo sapiens"
/chromosome="1"
/map="q21.2"
/mol_type="mRNA"
/dev_stage="adult"
/clone="77B12"
/clone="75M18"
/cell_line="U937"
/cell_type="monocyte"
/db_xref="taxon:9606"
CDS 191..1666
/gene="prcc"
/function="translocation sith TFE3 gene in papillary renal
cell cancer"
/db_xref="GOA:Q92733"
/db_xref="H-InvDB:HIT000324973.13"
/db_xref="HGNC:HGNC:9343"
/db_xref="InterPro:IPR018800"
/db_xref="UniProtKB/Swiss-Prot:Q92733"
/protein_id="CAA65791.1"
/translation="MSLVAYASSDESEPDEAEPEPEEEEAVAPTSGPALGGLFASLPA
PKGPALLPPPPQMLAPAFPPPLLLPPPTGDPRLQPPPPLPFGLGGFPPPPGVSPAEAA
GVGEGLGLGLPSPRGPGLNLPPPIGGAGPPLGLPKPKKRKEPVKIAAPELHKGDSDSE
EDEPTKKKTILQGSSEGTGLSALLPQPKNLTVKETNRLLLPHAFSRKPSDGSPDTKPS
RLASKTKTSSLAPVVGTTTTTPSPSAIKAAAKSAALQVTKQITQEEDDSDEEVAPENF
FSLPEKAEPPGVEPYPYPIPTVPEELPPGTEPEPAFQDDAANAPLEFKMAAGSSGAPW
MPKPGDDYSYNQFSTYGDANAAGAYYQDYYSGGYYPAQDPALVPPQEIAPDASFIDDE
AFKRLQGKRNRGREEINFVEIKGDDQLSGAQQWMTKSLTEEKTMKSFSKKKGEQPTGQ
QRRKHQITYLIHQAKERELELKNTWSENKLSRRQTQAKYGF"
BASE COUNT 440 a 612 c 538 g 399 t
ORIGIN
1 ctaaaggcct tgttcggtgg aaatcagccg tagccatgag tttctgccgg ggctagccct
61 agagtacgga gcaggcggac ttttcggttc cccgccccgc caggtggcgg ggcctactag
121 gcctccgggc atccccggtc tcaagtaggc ctcatctgcc ggcaagggcg cccgaaacgc
181 gggaggcgcc atgtcgctgg ttgcttacgc cagcagcgat gagagcgagc cggatgaggc
241 tgagcccgag ccggaggaag aggaggcggt ggctcctaca tctgggcccg ctttaggggg
301 cttgttcgct tctctccctg cgcccaaggg tccggccttg ctgcctccgc cccctcagat
361 gctggcgcca gcctttcccc cgccgctgtt gcttccccca cccaccggag accccaggct
421 tcagcctcct ccccccttgc ccttcggcct gggaggcttc cccccacctc caggcgtgag
481 cccggctgaa gcggcgggag ttggggaggg actgggattg gggttgccct cgccccgagg
541 ccctggcctc aatctgcccc ctccaattgg cggtgccggt cccccgctgg ggcttcccaa
601 gccaaagaag aggaaagagc ccgtgaagat cgcggcgccg gagttgcata agggagattc
661 agattctgag gaagatgaac ccacaaagaa gaaaactatc cttcagggat ccagtgaggg
721 gactggtttg tctgccttgc ttccccaacc taaaaacctg actgtgaaag agactaacag
781 gttgctcctg ccccatgcct tctcccgcaa accctcggat ggctcccctg atactaagcc
841 ctccagactg gcttctaaga ccaagacttc ctctcttgcc cctgttgtgg gcaccacaac
901 caccactccg tcgccctctg ctatcaaggc tgctgccaag agtgctgccc tgcaggtgac
961 aaagcagatc acgcaggaag aagacgacag tgatgaggaa gtagcccccg aaaacttttt
1021 ctccctccct gaaaaggctg agccacctgg agttgagcca tacccttacc ccatccccac
1081 tgtccctgaa gagctgcctc caggcacgga accagagccg gctttccagg acgatgcagc
1141 caatgccccc cttgaattca agatggcagc aggttcaagt ggggcccctt ggatgcctaa
1201 gcctggggac gactacagct acaatcagtt ttccacatat ggcgatgcca atgccgctgg
1261 tgcttattat caggattatt acagtggtgg ctactatcct gcacaggacc cggccctggt
1321 ccccccccag gaaattgccc cagatgcctc cttcatcgat gacgaagcat ttaagcggct
1381 gcagggcaag aggaaccgag ggagagaaga aatcaacttt gtggagatca aaggtgatga
1441 ccagctcagt ggggcccagc aatggatgac taagtcattg acagaagaga aaaccatgaa
1501 gtcattcagc aaaaagaaag gtgagcagcc aacaggccag cagcggcgga aacaccagat
1561 cacatatctt attcatcagg ccaaggagcg ggagctggaa ctgaagaaca cctggtcaga
1621 gaacaagctc agccgccgtc agacccaagc caaatatgga ttctagggct ctggaactga
1681 ttgctcccag gatctcctgc cagcccagct ggcctggccc ccagcttcac ctctgggacc
1741 ccagctgctc taagcccagg atctctttcc ccaaggaccc agccctcgcc tctgcgagaa
1801 tgaacatatt tgatagattt ttcttaacaa gttagaaaat tcagctcctt tctgtcctgg
1861 agctagcaaa gacttgtgtg atgcctccga aggggctctg agttctgggg tgggagtttt
1921 gctctctgtc aggtgtgata aaatgttgaa ccctccccac caccactttt ttttttttaa
1981 accagggat
//