LOCUS X82206 2846 bp mRNA linear HUM 07-OCT-2008
DEFINITION H.sapiens mRNA for alpha-centractin.
ACCESSION X82206
VERSION X82206.1
KEYWORDS centractin.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1
AUTHORS Clark S.W., Staub O., Holzbaur E.L.F., Paschal B.M., Vallee R.B.,
Meyer D.I., Clark I.B.
TITLE Beta-centractin: characterization and distribution of a new member
of the centractin family of actin-related proteins
JOURNAL Mol. Biol. Cell 5(12), 1301-1310(1994).
PUBMED 7696711
REFERENCE 2 (bases 1 to 2846)
AUTHORS Clark S.W.
JOURNAL Submitted (12-OCT-1994) to the INSDC. S.W. Clark, University of
California, Dept of Biological Chemistry, UCLA School of Medicine,
10833 Le Conte Ave., Los Angeles CA 90024-1737, USA
REFERENCE 3 (bases 1 to 2846)
AUTHORS Lees-Miller J.P., Helfman D.M., Schroer T.A.
TITLE A vertebrate actin-related protein is a component of a multisubunit
complex involved in microtubule-based vesicle motility
JOURNAL Nature 359(6392), 244-246(1992).
PUBMED 1528266
COMMENT Shows homology to Z14978 from position 19..1682.
FEATURES Location/Qualifiers
source 1..2846
/db_xref="H-InvDB:HIT000323909"
/organism="Homo sapiens"
/mol_type="mRNA"
/clone_lib="Clontech HL1010b"
/clone="FC1519"
/tissue_type="testicular"
/db_xref="taxon:9606"
misc_feature 1..9
/note="EcoRI linker"
CDS 67..1197
/product="alpha-centractin"
/db_xref="GOA:P61163"
/db_xref="H-InvDB:HIT000323909.14"
/db_xref="HGNC:HGNC:167"
/db_xref="InterPro:IPR004000"
/db_xref="InterPro:IPR004001"
/db_xref="InterPro:IPR020902"
/db_xref="UniProtKB/Swiss-Prot:P61163"
/protein_id="CAA57690.1"
/translation="MESYDVIANQPVVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKH
VRVMAGALEGDIFIGPKAEEHRGLLSIRYPMEHGIVKDWNDMERIWQYVYSKDQLQTF
SEEHPVLLTEAPLNPRKNRERAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDS
GDGVTHAVPIYEGFAMPHSIMRIDIAGRDVSRFLRLYLRKEGYDFHSSSEFEIVKAIK
ERACYLSINPQKDETLETEKAQYYLPDGSTIEIGPSRFRAPELLFRPDLIGEESEGIH
EVLVFAIQKSDMDLRRTLFSNIVLSGGSTLFKGFGDRLLSEVKKLAPKDVKIRISAPQ
ERLYSTWIGGSILASLDTFKKMWVSKKEYEEDGARSIHRKTF"
misc_difference 1262..1265
/replace="ctta"
/note="conflict"
/citation=[3]
misc_difference 1318..1320
/replace="gtg"
/note="conflict"
/citation=[3]
misc_difference 1378..1380
/replace="ctg"
/note="conflict"
/citation=[3]
misc_difference 1386..1387
/replace="gtgat"
/note="conflict"
/citation=[3]
misc_difference 1469..1472
/replace="gcgc"
/note="conflict"
/citation=[3]
misc_difference 1477..1478
/replace="gctggctgtgggggac"
/note="conflict"
/citation=[3]
misc_difference 1541..1543
/replace="aca"
/note="conflict"
/citation=[3]
misc_difference 1574..1575
/replace="gcc"
/note="conflict"
/citation=[3]
misc_difference 1596..1598
/replace="ag"
/note="conflict"
/citation=[3]
misc_difference 1674..1677
/replace="gg"
/note="conflict"
/citation=[3]
regulatory 2800..2805
/regulatory_class="polyA_signal_sequence"
misc_feature 2838..2846
/note="EcoRI linker"
BASE COUNT 636 a 790 c 768 g 652 t
ORIGIN
1 gaattcgggg cgctacggcg gacccggctg ggcagttcct tccccagaag gagagattcc
61 tctgccatgg agtcctacga tgtgatcgcc aaccagcctg tcgtgatcga caacggatcc
121 ggtgtgatta aagctggttt tgctggtgat cagatcccca aatactgctt tccaaactat
181 gtgggccgac ccaagcacgt tcgtgtcatg gcaggagccc ttgaaggcga catcttcatt
241 ggccccaaag ctgaggagca ccgagggctg ctttcaatcc gctatcccat ggagcatggc
301 atcgtcaagg attggaacga catggaacgc atttggcaat atgtctattc taaggaccag
361 ctgcagactt tctcagagga gcatcctgtg ctcctgactg aggcgccttt aaacccacga
421 aaaaaccggg aacgagctgc cgaagttttc ttcgagacct tcaatgtgcc cgctcttttc
481 atctccatgc aagctgtact cagcctttac gctacaggca ggaccacagg ggtggtgctg
541 gattctgggg atggagtcac ccatgctgtg cccatctatg agggctttgc catgccccac
601 tccatcatgc gcatcgacat cgcgggccgg gacgtctctc gcttcctgcg cctctacctg
661 cgtaaggagg gctacgactt ccactcatcc tctgagtttg agattgtcaa ggccataaaa
721 gaaagagcct gttacctatc cataaacccc caaaaggatg agacgctaga gacagagaaa
781 gctcagtact acctgcctga tggcagcacc attgagattg gtccttcccg attccgggcc
841 cctgagttgc tcttcaggcc agatttgatt ggagaggaga gtgaaggcat ccacgaggtc
901 ctggtgttcg ccattcagaa gtcagacatg gacctgcggc gcacgctttt ctctaacatt
961 gtcctctcag gaggctctac cctgttcaaa ggttttggtg acaggctcct gagtgaagtg
1021 aagaaactag ctccaaaaga tgtgaagatc aggatatctg cacctcagga gagactgtat
1081 tccacgtgga ttgggggctc catccttgcc tccctggaca cctttaagaa gatgtgggtc
1141 tccaaaaagg aatatgagga agacggtgcc cgatccatcc acagaaaaac cttctaatgt
1201 cgggacatca tcttcacctc tctctgaagt taactccact ttaaaactcg ctttcttgag
1261 tcggagtgtt tgcgaggaac tgcctgtgtg tgagtgcgtg tgtggatatg agtgtgtgcg
1321 cacatgcgag tgccgtgtgg ccctgggacc ctgggcccag aaaggacgat gaactacccg
1381 cagtggtgat gcctgaggcc tggggttgac cactaactgg ctcctgacag ggaagagcgc
1441 tggcagaggc tgtgctccct cctcaggtgg cctctggctg gctgtggggg actccgttta
1501 ctaccacagg gagacagagg gaggtaagcc atcccccggg agaccttgct gctgaccatc
1561 ctaggctggg ctggcccacc ctcaccccca cccccagggt gccctgaggc cccaggcagc
1621 tgctgcctcc actatcgatg cctcctgact gcacactgag gactgggact ggggttgagt
1681 tctgtctggt tttgttgcca ttttggtttg ggaggctgga aaagcacccc aagaagctat
1741 tacagagact ggagtcagga gagagcagga ggccctcatg ttcaccaggg aacaggacca
1801 caccggccac tgaaggaggg caggagcagt cctccctctg aatggctgca gagttaatgt
1861 tcccagccca gtcccctttc gggggccttg ggagagttta aggcacctgc tggttccagg
1921 acctcgcttt ccatctgttc ttgttgcaat gccatcttca aaccgtttta tttattgaag
1981 tgtttgttca gttaggggct ggagagaggg agcttgctgc ctcctgcctt gctacactaa
2041 tgtttacagc acctaagctt agcctccagg gccccacctc tcccagctga tggtgagctg
2101 acagtgtcca caggttccag gaccatttga gattggaagc tacactcaaa gacactccca
2161 ccaggctctt tctccctttt cctcttctca ctgccctgga atcaacaggc tggttgctgg
2221 ttagattttc tgaaacagga ggtaaaattt ttctttggca gaggccccta agcaagggag
2281 gggtgttgga gagccagtgc ccttaagact ggagaaagct gcaatttacc aagttgcctt
2341 ttgccactgt agctgaccag gggactaggt tgtagaggtg ggaaggcccc tctgggctga
2401 tcttgtgcca ttcttgacct tggacctgct tggttaagga gggagtgggc cagaccagag
2461 tgccaggagc taatggagcc aggcctgaca cctaggagtg gtccaaagcc ttcagcctag
2521 atggtgcaaa gctggggcca gcctgtcttc accggcaccc tcacctgtga caccaagacc
2581 caccccaatc cagacttcac acagtattct cccccacgcc gtctatgacc aaaggcccct
2641 gccaggtgtg ggtccacagc agcaggtatg tgtgaaagca acgtagcgcc ccgcggactg
2701 cagtgcgctt aaccaactca cctcccttct cttagcccaa gcctgtccct cgcacagcct
2761 cgcacaaacc acattgcctg gtggggccca gtgtactgaa ataaagtcgt tccgatagac
2821 acgtcaaaaa aaaaaaaccc gaattc
//