LOCUS X72727 2830 bp mRNA linear HUM 07-OCT-2008
DEFINITION H.sapiens tunp mRNA for transformation upregulated nuclear protein.
ACCESSION X72727
VERSION X72727.1
KEYWORDS transformation upregulated nuclear protein.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1
AUTHORS Dejgaard K., Leffers H., Rasmussen H.H., Madsen P., Kruse T.A.,
Gesser B., Nielsen H., Celis J.E.
TITLE Identification, molecular cloning, expression and chromosome
mapping of a family of transformation upregulated hnRNP-K proteins
derived by alternative splicing
JOURNAL J. Mol. Biol. 236(1), 33-48(1994).
PUBMED 8107114
REFERENCE 2 (bases 1 to 2830)
AUTHORS Leffers H.
JOURNAL Submitted (18-MAR-1993) to the INSDC. H. Leffers, Institute of
Medical Biochemistry and, Danish Centre for Human Genome Research,
Ole Worms Alle 170, Aarhus University, 8000 Aarhus, DENMARK
COMMENT Another alternative splice event replaces exon C with another
exon (see exon D, X72726)
FEATURES Location/Qualifiers
source 1..2830
/db_xref="H-InvDB:HIT000323341"
/organism="Homo sapiens"
/chromosome="9"
/mol_type="mRNA"
/clone_lib="lambda ZAP II AMA cDNA"
/clone="tunps A,B,C,D"
/cell_line="AMA cells"
/db_xref="taxon:9606"
CDS 210..1604
/gene="tunp"
/product="transformation upregulated nuclear protein"
/db_xref="GOA:P61978"
/db_xref="H-InvDB:HIT000323341.14"
/db_xref="HGNC:HGNC:5044"
/db_xref="InterPro:IPR004087"
/db_xref="InterPro:IPR004088"
/db_xref="InterPro:IPR012987"
/db_xref="InterPro:IPR033090"
/db_xref="InterPro:IPR036612"
/db_xref="PDB:1J5K"
/db_xref="PDB:1KHM"
/db_xref="PDB:1ZZI"
/db_xref="PDB:1ZZJ"
/db_xref="PDB:1ZZK"
/db_xref="UniProtKB/Swiss-Prot:P61978"
/experiment="experimental evidence, no additional details
recorded"
/protein_id="CAA51267.1"
/translation="METEQPEETFPNTETNGEFGKRPAEDMEEEQDFKRSRNTDEMVE
LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILK
KIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCELRLLIHQSLAGGII
GVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPI
KGRAQPYDPNFYDETYDYGGFTMMFDDRRGRPVGFPMRGRGGFDRMPPGRGGRPMPPS
RRDYDDMSPRRGPPPPPPGRGGRGGSRARNLPLPPPPPPRGGDLMAYDRRGRPGDRYD
GMVGFSADETWDSAIDTWSPSEWQMAYEPQGGSGYDYSYAGGRGSYGDLGGPIITTQV
TIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYL
LQNSVKQYADVEGF"
misc_feature 1317..1331
/note="alternatively spliced exon A"
misc_feature 1570..1630
/note="alternatively spliced exon B"
misc_feature 1902..2830
/note="alternatively spliced exon C"
regulatory 2082..2086
/gene="tunp"
/regulatory_class="polyA_signal_sequence"
regulatory 2805..2814
/gene="tunp"
/regulatory_class="polyA_signal_sequence"
BASE COUNT 805 a 530 c 654 g 841 t
ORIGIN
1 agggcgctcc aggcgacacg attgcagacg ccattatcct ctgtttctct gctgcaccga
61 cctcgacgtc ttgcctgtgt cccacttgtt cgcggcctat aggctactgc agcactgggg
121 tgtcagttgt tggtccgacc cagaacgctt cagttgtgct ctgcaaggat atataataac
181 tgattggtgt gcccgtttaa taaaagaata tggaaactga acagccagaa gaaaccttcc
241 ctaacactga aaccaatggt gaatttggta aacgccctgc agaagatatg gaagaggaac
301 aagactttaa aagatctaga aacactgatg agatggttga attacgcatt ctgcttcaga
361 gcaagaatgc tggggcagtg attggaaaag gaggcaagaa tattaaggct ctccgtacag
421 actacaatgc cagtgtttca gtcccagaca gcagtggccc cgagcgcata ttgagtatca
481 gtgctgatat tgaaacaatt ggagaaattc tgaagaaaat catccctacc ttggaagagg
541 gcctgcagtt gccatcaccc actgcaacca gccagctccc gctcgaatct gatgctgtgg
601 aatgcttaaa ttaccaacac tataaaggaa gtgactttga ctgcgagttg aggctgttga
661 ttcatcagag tctagcagga ggaattattg gggtcaaagg tgctaaaatt aaagaacttc
721 gagagaacac tcaaaccacc atcaagcttt tccaggaatg ctgtcctcat tccactgaca
781 gagttgttct tattggagga aaacccgata gggttgtaga gtgcataaag atcatccttg
841 atcttatatc tgagtctccc atcaaaggac gtgcacagcc ttatgatccc aatttttacg
901 atgaaaccta tgattatggt ggttttacaa tgatgtttga tgaccgtcgc ggacgcccag
961 tgggatttcc catgcgggga agaggtggtt ttgacagaat gcctcctggt cggggtgggc
1021 gtcccatgcc tccatctaga agagattatg atgatatgag ccctcgtcga ggaccacctc
1081 cccctcctcc cggacgaggc ggccggggtg gtagcagagc tcggaatctt cctcttcctc
1141 caccaccacc acctagaggg ggagacctca tggcctatga cagaagaggg agacctggag
1201 accgttacga cggcatggtt ggtttcagtg ctgatgaaac ttgggactct gcaatagata
1261 catggagccc atcagaatgg cagatggctt atgaaccaca gggtggctcc ggatatgatt
1321 attcctatgc agggggtcgt ggctcatatg gtgatcttgg tggacctatt attactacac
1381 aagtaactat tcccaaagat ttggctggat ctattattgg caaaggtggt cagcggatta
1441 aacaaatccg tcatgagtcg ggagcttcga tcaaaattga tgagccttta gaaggatccg
1501 aagatcggat cattaccatt acaggaacac aggaccagat acagaatgca cagtatttgc
1561 tgcagaacag tgtgaagcag tatgcagatg ttgaaggatt ctaatgcaag atattttttc
1621 ttttttatag tgtgaagcag tattctggaa agtttttcta agactagtga agaactgaag
1681 gagtcctgca tctttttttt tttatctgct tctgtttaaa aagccaacat tcctctgctt
1741 cataggtgtt ctgcatttga ggtgtagtga aatctttgct gttcaccaga tgtaatgttt
1801 tagttcttac aaacagggtt ggggggggga agggcgtgca aaaactaaca ttgaaatttt
1861 gaaacagcag cagagtgagt ggattttatt tttcgttatt gtggtggttt aaaaaattcc
1921 ccccatgtaa ttattgtgaa caccttgctt tgtggtcact gtaacatttg gggggtgggc
1981 cagggaggaa aagtaacaat agtccacatg tccctggcat ctgttcagag cagtgtgcag
2041 aatgtaatgc tcttttgtaa gaaacgtttt atgattttta aaataaattt agtgaaccta
2101 tttttggtgg tcattttttt tttaagacag tcattttaaa atggtggctg aatttcccaa
2161 cccaccccca aactaaacac taagtttaat tttcagctcc tctgttggac atataagtgc
2221 atctcttgtt ggacataggc aaaataactt ggcaaactta gttctggtga tttcttgatg
2281 gtttggaagt ctattgctgg gaagaaattc catcatacat attcatgctt ataataagct
2341 ggggattttt tgtttgtttt tgcaaatgct tgcccctact tttcaacaat tttctatgtt
2401 agttgtgaag aactaaggtg gggagcagta ctacaagttg agtaatggta tgagtatata
2461 ccagaattct gattggcagc aagtttatta atcagaataa cacttggtta tggaagtgac
2521 taatgctgaa aaaattgatt atttttatta gataatttct cacctataga cttaaactgt
2581 caatttgctc tagtgtctta ttagttaaac tttgtaaaat atatatatac ttgtttttcc
2641 attgtatgca aattgaaaga aaaagatgta ccatttctct gttgtatgtt ggattatgta
2701 ggaatgtttg tgtacaattc aaaaaaaaaa aagatgaaaa aagttcctgt ggatgttttg
2761 tgtagtatct tggcatttgt attgatagtt aaaattcact tccaaataaa taaaacaccc
2821 atgatgctag
//