LOCUS X70649 2706 bp mRNA linear HUM 21-OCT-2008
DEFINITION Homo sapiens DDX1 gene, complete CDS.
ACCESSION X70649
VERSION X70649.1
KEYWORDS DDX1 gene; DEAD box protein; retinoblastoma; subunit.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1
AUTHORS Godbout R.
JOURNAL Submitted (13-JAN-1993) to the INSDC. R. Godbout, Cross Cancer
Institute, 11560 University Avenue, Edmonton, Alberta, T6G 1Z2,
CANADA
REMARK revised by [4]
REFERENCE 2 (bases 1 to 2400)
AUTHORS Godbout R., Squire J.
TITLE Amplification of a DEAD box protein gene in retinoblastoma cell
lines
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 90(16), 7578-7582(1993).
PUBMED 7689221
REFERENCE 4
AUTHORS Godbout R.
JOURNAL Submitted (11-MAR-1996) to the INSDC. R. Godbout, Cross Cancer
Institute, 11560 University Avenue, Edmonton, Alberta, T6G 1Z2,
CANADA
REMARK Revised by [5]
REFERENCE 5
AUTHORS Godbout R.
JOURNAL Submitted (04-JUN-1996) to the INSDC. R. Godbout, Cross Cancer
Institute, 11560 University Avenue, Edmonton, Alberta, T6G 1Z2,
CANADA
REMARK revised by [6]
REFERENCE 6 (bases 1 to 2706)
AUTHORS Godbout R.
JOURNAL Submitted (05-MAY-1998) to the INSDC. R. Godbout, Cross Cancer
Institute, 11560 University Avenue, Edmonton, Alberta, T6G 1Z2,
CANADA
FEATURES Location/Qualifiers
source 1..2706
/db_xref="H-InvDB:HIT000323104"
/organism="Homo sapiens"
/mol_type="mRNA"
/cell_type="retinoblastoma"
/db_xref="taxon:9606"
CDS 289..2511
/gene="DDX1"
/product="member of DEAD box protein family"
/db_xref="GOA:Q92499"
/db_xref="H-InvDB:HIT000323104.14"
/db_xref="HGNC:HGNC:2734"
/db_xref="InterPro:IPR001650"
/db_xref="InterPro:IPR001870"
/db_xref="InterPro:IPR003877"
/db_xref="InterPro:IPR011545"
/db_xref="InterPro:IPR013320"
/db_xref="InterPro:IPR014001"
/db_xref="InterPro:IPR014014"
/db_xref="InterPro:IPR027417"
/db_xref="PDB:4XW3"
/db_xref="UniProtKB/Swiss-Prot:Q92499"
/protein_id="CAA49992.1"
/translation="MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLM
AAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAF
AIGSDGLCCQSREVKEWHGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGT
DKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEI
PPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQ
VTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLS
VLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIP
QVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNP
KTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQ
AIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDV
RFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE
KVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVD
EFDGKVTYGQKRAAGGGSYKGHVDILAPTVQELAALEKEAQTSFLHLGYLPNQLFRTF
"
3'UTR 2512..2706
/gene="DDX1"
regulatory 2688..2693
/gene="DDX1"
/regulatory_class="polyA_signal_sequence"
polyA_site 2706
/gene="DDX1"
BASE COUNT 821 a 523 c 676 g 686 t
ORIGIN
1 ctctgtagct gtgaccctga taccgcgtgg tgtgctccga acacatggtg cccagaacga
61 aggcggcgtc cagaagccct aggtcccaga ggtccgctca gcggcaggcg cataaggcgg
121 ggccggcgcg ggcctttcct tccatcggaa ccgttctccc ggggctgagt ccctgcccgg
181 actccgaacg ccgaagacca ggggccggaa gcgcgcgccg ccactgccac gccgtgtcag
241 tcgggaggga gggagcgagc aggcgaagcc gcggaggacg gggtgaagat ggcggccttc
301 tccgagatgg gtgtaatgcc tgagattgca caagctgtgg aagagatgga ttggctcctc
361 ccaactgata tccaggctga atctatccca ttgatcttag gaggaggtga tgtacttatg
421 gctgcagaaa caggaagtgg caaaactggt gcttttagta ttccagttat ccagatagtt
481 tatgaaactc tgaaagacca acaggaaggc aaaaaaggaa aaacaacaat taaaactggt
541 gcttcagtgc tgaacaaatg gcagatgaac ccatatgaca gaggatctgc ttttgcaatt
601 gggtcagatg gtctttgttg tcaaagcaga gaagtaaagg aatggcatgg gtgtagagct
661 actaaaggat taatgaaagg gaaacactac tatgaagtat cctgtcatga ccaagggtta
721 tgcagggtcg ggtggtctac catgcaggcc tctttggacc taggtactga caagtttgga
781 tttggctttg gtggaacagg aaagaaatcc cataacaaac aatttgataa ttatggagag
841 gaattcacta tgcatgatac cattggatgt tacctggata tagataaggg acatgtcaag
901 ttctccaaaa atggaaaaga tcttggtctg gcatttgaaa taccaccaca tatgaaaaac
961 caagccctct ttcctgcctg tgttttgaag aatgctgaac tgaaatttaa cttcggtgaa
1021 gaggaattta agtttccacc aaaagatggc tttgttgctc tttccaaggc accggatggt
1081 tacattgtca aatcacagca ctcaggtaat gcacaggtga cacaaacaaa gtttctcccc
1141 aatgctccga aagctctcat tgttgaacct tcccgggagt tagctgaaca aactttgaac
1201 aacatcaagc agtttaagaa atacattgat aatcctaaat taagggagct tctgataatt
1261 ggaggtgttg cagcccggga tcagctctct gttttggaaa atggagtaga tatagttgta
1321 ggtactccgg gaagactaga tgacttggtg tcaactggaa agctgaactt atctcaagtt
1381 agattcctgg tcctggatga agctgatggg cttctttctc aaggttattc tgattttata
1441 aataggatgc acaatcagat tcctcaggtt acctctgatg gaaaaagact tcaggtgatt
1501 gtttgctctg ccactttgca ttctttcgat gtaaagaaac tgtccgagaa gataatgcat
1561 tttcctacat gggttgactt aaaaggagaa gactctgttc cagatactgt acaccatgtt
1621 gttgtcccag taaatcccaa aactgacaga ctctgggaaa ggcttggaaa gagccacatt
1681 agaactgatg atgtacatgc aaaagataac acaagacctg gtgctaatag tccagagatg
1741 tggtctgaag ctattaaaat cctgaaaggg gagtatgctg tccgggcaat caaggaacat
1801 aagatggatc aagcaattat cttctgtaga accaaaattg actgtgataa cttggagcag
1861 tactttatac aacaaggagg aggacctgat aaaaaaggac accagttctc atgtgtttgt
1921 cttcatggtg acagaaagcc tcatgagaga aagcaaaact tggaaagatt taagaaagga
1981 gatgtaagat tcttgatttg cacagatgta gctgctagag gaattgatat ccacggtgtt
2041 ccttatgtta taaatgtcac tctgcccgat gaaaagcaaa actacgtaca tcgaattggc
2101 agagtaggaa gagctgaaag gatgggtctg gcaatttccc tggtggcaac agaaaaagaa
2161 aaggtttggt accatgtatg tagcagccgt ggaaaagggt gttataacac aagactcaag
2221 gaagatggag gctgtaccat atggtacaac gagatgcagt tactatctga gatagaagaa
2281 cacctgaact gtaccatttc tcaggttgag ccggatataa aggtaccagt ggatgaattt
2341 gatgggaaag ttacctacgg tcagaaaagg gctgctggtg gtggaagcta taaaggccat
2401 gtggatattt tggcacctac tgttcaagag ttggctgccc ttgaaaagga ggcgcagaca
2461 tctttcctgc atcttggcta ccttcctaac cagctgttca gaaccttctg atttttacat
2521 ttactgaata agatttgagt aatgaaagtc tgtagtctta aaactctaaa acagttgtac
2581 tgcttccaag cagcagtatt tatagtaacg taagctatta atgctaactc ttgcatgtca
2641 agaaacatta gtcttaggaa ttcttcaaaa aatggcatcc caatgaaaat aaatttgatg
2701 actata
//