LOCUS       X61598                  1936 bp    mRNA    linear   HUM 18-APR-2005
DEFINITION  H.sapiens mRNA for colligin (a collagen-binding protein).
ACCESSION   X61598
VERSION     X61598.1
KEYWORDS    collagen-binding protein; colligin.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1936)
  AUTHORS   Clarke E.
  JOURNAL   Submitted (23-SEP-1991) to the INSDC. E. Clarke, The University of
            Western Ontario, Health Sciences Centre, Faculty of Medicine, Dept
            of Biochemistry, London  Ontario N6A  5C1, CANADA
REFERENCE   2
  AUTHORS   Clarke E., Sandwal B.D.
  TITLE     Cloning of a human collagen-binding protein, and its homology with
            rat gp46, chick hsp47 and mouse J6 proteins
  JOURNAL   Biochim. Biophys. Acta 1129(2), 246-248(1992).
   PUBMED   1309665
COMMENT     Sequence comparisons reveal that human colligin, gp46, HSP47 and J6
            represent the same protein in different cell lines and thus all
            should be refered to as colligin.
FEATURES             Location/Qualifiers
     source          1..1936
                     /db_xref="H-InvDB:HIT000322464"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /cell_type="fibroblast"
                     /tissue_type="skin"
                     /db_xref="taxon:9606"
     CDS             34..1287
                     /product="colligin"
                     /function="collagen-binding protein"
                     /db_xref="GOA:P50454"
                     /db_xref="H-InvDB:HIT000322464.13"
                     /db_xref="HGNC:HGNC:1546"
                     /db_xref="InterPro:IPR000215"
                     /db_xref="InterPro:IPR023795"
                     /db_xref="InterPro:IPR023796"
                     /db_xref="InterPro:IPR033547"
                     /db_xref="InterPro:IPR033830"
                     /db_xref="InterPro:IPR036186"
                     /db_xref="InterPro:IPR042178"
                     /db_xref="InterPro:IPR042185"
                     /db_xref="UniProtKB/Swiss-Prot:P50454"
                     /protein_id="CAA43795.1"
                     /translation="MRSLLLGTLCLLAVALAAEVKKPVEAAAPGTAEKLSSKATTLAE
                     PSTGLAFSLYQAMAKDQAVENILVSPVVVASSLGLVSLGGKATTASQAKAVLSAEQLR
                     DEEVHAGLGELLRSLSNSTARNVTWKLGSRLYGPSSVSFADDFVRSSKQHYNCEHSKI
                     NFPDKRSALQSINEWAAQTTDGKLPEVTKDVERTDGALLVNAMFFKPHWDEKFHHKMV
                     DNRGFMVTRSYTVGVTMMHRTGLYNYYDDEKEKLQLVEMPLAHKLSSLIILMPHHVEP
                     LERLEKLLTKEQLKIWMGKMQKKAVAISLPKGVVEVTHDLQKHLAGLGLTEAIDKNKA
                     DLSRMSGKKDLYLASVFHATAFELDTDGNPFDQDIYGREELRSPKLFYADHPFIFLVR
                     DTQSGSLLFIGRLVRLKGDKMRDEL"
     sig_peptide     34..84
                     /note="colligin"
     mat_peptide     85..1284
                     /product="colligin"
                     /function="collagen-binding protein"
     misc_feature    1273..1284
                     /note="C-terminal RDEL sequence"
BASE COUNT          424 a          568 c          562 g          382 t
ORIGIN      
        1 ggtcctctgt ggtgcacagc ccacccccca gccatgcgct ctctccttct gggcacctta
       61 tgcctcctgg ctgtggccct ggcagccgag gtgaagaaac ctgtagaggc cgcagcccct
      121 ggtactgcgg agaagctgag ttccaaggcg accacactgg cagagcccag cacaggcctg
      181 gccttcagcc tgtatcaggc aatggccaag gaccaggcag tggagaacat cctggtgtca
      241 cccgtggtgg tggcctcgtc gctgggtctc gtgtcgctgg gcggcaaggc gaccacggcg
      301 tcgcaggcca aggcagtgct gagcgccgag cagctgcgcg acgaggaggt gcacgccggc
      361 ctgggtgagc tgctgcgctc actcagcaac tcgacggcgc gcaacgtgac ctggaagctg
      421 ggcagccgac tgtacggacc cagctcagtg agcttcgctg atgacttcgt gcgcagcagc
      481 aagcagcact acaactgcga gcactccaag atcaacttcc cggacaagcg cagcgcgctg
      541 cagtccatca acgagtgggc cgcgcagacc accgacggca agctgcccga ggtcaccaag
      601 gacgtggagc gcacggacgg cgccctgcta gtcaacgcca tgttcttcaa gccacactgg
      661 gatgagaaat tccaccacaa gatggtggac aaccgtggct tcatggtgac tcggtcctat
      721 actgtgggtg ttacgatgat gcaccggaca ggcctctaca actactacga cgacgagaag
      781 gagaagctgc agctggtgga gatgcccctg gctcacaagc tctccagcct catcatcctc
      841 atgccccatc acgtggagcc tctcgagcgc cttgaaaagc tgctaaccaa agagcagctg
      901 aagatctgga tggggaagat gcagaagaag gctgttgcca tctccttgcc caagggtgtg
      961 gtggaggtga cccatgacct gcagaaacac ctggctgggc tgggcctgac tgaggccatt
     1021 gacaagaaca aggccgactt atcacgcatg tctggcaaga aggatctgta cctggccagt
     1081 gtgttccacg ccaccgcctt tgagttggac acagatggca acccctttga ccaggacatc
     1141 tacgggcgcg aggagctgcg cagccccaag ctgttctacg ccgaccaccc cttcatcttc
     1201 ctggtgcggg acacccaaag cggctccctg ctattcattg ggcgcctggt ccggctcaag
     1261 ggtgacaaga tgcgagacga gttatagggc ctcagggtgc acacaggatg gcaggaggca
     1321 tccaaaggct cctgagacac atgggtgcta ttggggttgg gggggaggtg aggtaccagc
     1381 cttggatact ccatggaatt cgagctccac ttggacatgg gccccagata ccatgatgct
     1441 gagcccggaa actccacatc ctgtgggacc tgggccatag tcattctgcc tgccctgaaa
     1501 gtcccagatc aagcctgcct caatcagtat tcatatttat agccaggtac cttctcacct
     1561 gtgagaccaa attgagctcg gggggtcagc cagccctctt ctgacactaa aacacctcag
     1621 ctgcctcccc agctctatcc caacctctcc caactataaa actaggtgct gcagcctggg
     1681 accaggcacc cccagaatga cctggccgca gtgaggcgat tgagaaggag ctcccaggag
     1741 gggcttctgg gaagaccctg gtcaagaagc atcgtctggc gttgtgggga tgaacttttt
     1801 gttttgtttc ttcctttttt agttcttcaa ggaatggggg gccagggggg caatgagcct
     1861 ttgttgctaa tcaaatccgg gacttgtttg tacgtttttt tttctcactg aaaccttttc
     1921 cagtgccaaa aaaaaa
//