LOCUS X54315 2853 bp mRNA linear HUM 07-OCT-2008
DEFINITION Human mRNA for N-cadherin.
ACCESSION X54315
VERSION X54315.1
KEYWORDS cell adhesion molecule; N-cadherin; transmembrane protein.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 675;679 to 1022;1026 to 2195;2199 to 2213;2217 to
2853)
AUTHORS Reid R.A.
JOURNAL Submitted (01-AUG-1990) to the INSDC. Reid R.A., Becton Dickinson &
Company Research Centre, 21 Davis Drive P O Box 12016, Research
Triangle Park NC 27709, U S A.
REFERENCE 2 (bases 1 to 2853)
AUTHORS Reid R.A., Hemperly J.J.
TITLE Human N-cadherin: nucleotide and deduced amino acid sequence
JOURNAL Nucleic Acids Res. 18(19), 5896-5896(1990).
PUBMED 2216790
REFERENCE 3 (bases 1 to 2853)
AUTHORS Reid R.A.
JOURNAL Submitted (16-NOV-1990) to the INSDC.
FEATURES Location/Qualifiers
source 1..2853
/db_xref="H-InvDB:HIT000321886"
/organism="Homo sapiens"
/mol_type="mRNA"
/clone_lib="lambda gt10"
/cell_line="Kelly."
/cell_type="neuroblastoma"
/db_xref="taxon:9606"
CDS 102..2822
/note="precursor protein"
/db_xref="GOA:P19022"
/db_xref="H-InvDB:HIT000321886.14"
/db_xref="HGNC:HGNC:1759"
/db_xref="InterPro:IPR000233"
/db_xref="InterPro:IPR002126"
/db_xref="InterPro:IPR014868"
/db_xref="InterPro:IPR015919"
/db_xref="InterPro:IPR020894"
/db_xref="InterPro:IPR027397"
/db_xref="InterPro:IPR030051"
/db_xref="InterPro:IPR039808"
/db_xref="UniProtKB/Swiss-Prot:P19022"
/protein_id="CAA38213.1"
/translation="MCRIAGALRTLLPLLLALLQASVEASGEIALCKTGFPEDVYSAV
LSKDVHEGQPLLNVKFSNCNGKRKVQYESSEPADFKVDEDGMVYAVRSFPLSSEHAKF
LIYAQDKETQEKWQVAVKLSLKPTLTEESVKESAEVEEIVFPRQFSKHSGHLQRQKRD
WVIPPINLPENSRGPFPQELVRIRSDRDKNLSLRYTVTGPGADQPPTGIFIINPISGQ
LSVTKPLDREQIARFHLRAHAVDINGNQVENPIDIVINVIDMNDNRPEFLHQVWNGTV
PEGSKPGTYVMTVTAIDADDPNALNGMLRYRIVSQAPSTPSPNMFTINNETGDIITVA
AGLDREKVQQYTLIIQATDMEGIPTYGLSNTATAVITVTDVNDNPPEFTAMTFYGEVP
ENRVDIIVANLTVTDKDQPHTPAWNAVYRISGGDPTGRFAIQTDPNSNDGLVTVVKPI
DFETNRMFVLTVAAENQVPLAKGIQHPPQSTATVSVTVIDVNENPYFAPNPKIIRQEE
GLHAGTMLTTFTAQDPDRYMQQNIRYTKLSDPANWLKIDPVNGQITTIAVLDRESPNV
KNNIYNATFLASDNGIPPMSGTGTLQIYLLDINDNAPQVLPQEAETCETPDPNSINIT
ALDYDIDPNAGPFAFDLPLSPVTIKRNWTITRLNGDFAQLNLKIKFLEAGIYEVPIII
TDSGNPPKSNISILRVKVCQCDSNGDCTDVDRIVGAGLGTGAIIAILLCIIILLILVL
MFVVWMKRRDKERQAKQLLIDPEDDVRDNILKYDEEGGGEEDQDYDLSQLQQPDTVEP
DAIKPVGIRRMDERPIHAEPQYPVRSAAPHPGDIGDFINEGLKAADNDPTAPPYDSLL
VFDYEGSGSTAGSLSSLNSSSSGGEQDYDYLNDWGPRFKKLADMYGGGDD"
sig_peptide 102..164
/note="signal peptide"
mat_peptide 171..2819
/note="propeptide"
old_sequence 657..679
/note="cac was cgc"
/citation=[1]
old_sequence 1022..1026
/note="aag was acg"
/citation=[1]
old_sequence 2195..2199
/note="aag was agg"
/citation=[1]
old_sequence 2213..2217
/note="tcc was ttc"
/citation=[1]
BASE COUNT 803 a 686 c 669 g 695 t
ORIGIN
1 accctggccg ctgttggtgc tgccgctgcc tcctcctcct ccgccgccgc cgccgccgcc
61 gccgcctcct ccggctcttc gctcggcccc tctccgcctc catgtgccgg atagcgggag
121 cgctgcggac cctgctgccg ctgctgctgg ccctgcttca ggcgtctgta gaggcttctg
181 gtgaaatcgc attatgcaag actggatttc ctgaagatgt ttacagtgca gtcttatcga
241 aggatgtgca tgaaggacag cctcttctca atgtgaagtt tagcaactgc aatggaaaaa
301 gaaaagtaca atatgagagc agtgagcctg cagattttaa ggtggatgaa gatggcatgg
361 tgtatgccgt gagaagcttt ccactctctt ctgagcatgc caagttcctg atatatgccc
421 aagacaaaga gacccaggaa aagtggcaag tggcagtaaa attgagcctg aagccaacct
481 taactgagga gtcagtgaag gagtcagcag aagttgaaga aatagtgttc ccaagacaat
541 tcagtaagca cagtggccac ctacaaaggc agaagagaga ctgggtcatc cctccaatca
601 acttgccaga aaactccagg ggaccttttc ctcaagagct tgtcaggatc aggtctgata
661 gagataaaaa cctttcactg cggtacactg taactgggcc aggagctgac cagcctccaa
721 ctggtatctt cattatcaac cccatctcgg gtcagctgtc ggtgacaaag cccctggatc
781 gcgagcagat agcccggttt catttgaggg cacatgcagt agatattaat ggaaatcaag
841 tggagaaccc cattgacatt gtcatcaatg ttattgacat gaatgacaac agacctgagt
901 tcttacacca ggtttggaat gggacagttc ctgagggatc aaagcctgga acatatgtga
961 tgaccgtaac agcaattgat gctgacgatc ccaatgccct caatgggatg ttgaggtaca
1021 gaatcgtgtc tcaggctcca agcacccctt cacccaacat gtttacaatc aacaatgaga
1081 ctggtgacat catcacagtg gcagctggac ttgatcgaga aaaagtgcaa cagtatacgt
1141 taataattca agctacagac atggaaggaa tccccacata tggcctttca aacacagcca
1201 cggccgtcat cacagtgaca gatgtcaatg acaatcctcc agagtttact gccatgacgt
1261 tttatggtga agttcctgag aacagggtag acatcatagt agctaatcta actgtgaccg
1321 ataaggatca accccataca ccagcctgga acgcagtgta cagaatcagt ggcggagatc
1381 ctactggacg gttcgccatc cagaccgacc caaacagcaa cgacgggtta gtcaccgtgg
1441 tcaaaccaat cgactttgaa acaaatagga tgtttgtcct tactgttgct gcagaaaatc
1501 aagtgccatt agccaaggga attcagcacc cgcctcagtc aactgcaacc gtgtctgtta
1561 cagttattga cgtaaatgaa aacccttatt ttgcccccaa tcctaagatc attcgccaag
1621 aagaagggct tcatgccggt accatgttga caacattcac tgctcaggac ccagatcgat
1681 atatgcagca aaatattaga tacactaaat tatctgatcc tgccaattgg ctaaaaatag
1741 atcctgtgaa tggacaaata actacaattg ctgttttgga ccgagaatca ccaaatgtga
1801 aaaacaatat atataatgct actttccttg cttctgacaa tggaattcct cctatgagtg
1861 gaacaggaac gctgcagatc tatttacttg atattaatga caatgcccct caagtgttac
1921 ctcaagaggc agagacttgc gaaactccag accccaattc aattaatatt acagcacttg
1981 attatgacat tgatccaaat gctggaccat ttgcttttga tcttccttta tctccagtga
2041 ctattaagag aaattggacc atcactcggc ttaatggtga ttttgctcag cttaatttaa
2101 agataaaatt tcttgaagct ggtatctatg aagttcccat cataatcaca gattcgggta
2161 atcctcccaa atcaaatatt tccatcctgc gcgtgaaggt ttgccagtgt gactccaacg
2221 gggactgcac agatgtggac aggattgtgg gtgcggggct tggcaccggt gccatcattg
2281 ccatcctgct ctgcatcatc atcctgctta tccttgtgct gatgtttgtg gtatggatga
2341 aacgccggga taaagaacgc caggccaaac aacttttaat tgatccagaa gatgatgtaa
2401 gagataatat tttaaaatat gatgaagaag gtggaggaga agaagaccag gactatgact
2461 tgagccagct gcagcagcct gacactgtgg agcctgatgc catcaagcct gtgggaatcc
2521 gacgaatgga tgaaagaccc atccacgctg agccccagta tccggtccga tctgcagccc
2581 cacaccctgg agacattggg gacttcatta atgagggcct taaagcggct gacaatgacc
2641 ccacagctcc accatatgac tccctgttag tgtttgacta tgaaggcagt ggctccactg
2701 ctgggtcctt gagctccctt aattcctcaa gtagtggtgg tgagcaggac tatgattacc
2761 tgaacgactg ggggccacgg ttcaagaaac ttgctgacat gtatggtgga ggtgatgact
2821 gaacttcagg gtgaacttgg tttttggaca agt
//