LOCUS X51435 9020 bp mRNA linear HUM 07-OCT-2008
DEFINITION Human PRDII-BF1 gene for a DNA-binding protein.
ACCESSION X51435
VERSION X51435.1
KEYWORDS DNA-binding protein; PRDII-BF1 gene; zinc finger protein.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 9020)
AUTHORS Fan C.M.
JOURNAL Submitted (11-JAN-1990) to the INSDC. Fan C.-M., Harvard
University, Dept of Biochemical & Molecular Biology, 7 Divinity
Avenue, Cambridge MA 02138, U S A.
REFERENCE 2 (bases 1 to 9020)
AUTHORS Fan C.M., Maniatis T.
TITLE A DNA-binding protein containing two widely separated zinc finger
motifs that recognize the same DNA sequence
JOURNAL Genes Dev. 4(1), 29-42(1990).
PUBMED 2106471
FEATURES Location/Qualifiers
source 1..9020
/db_xref="H-InvDB:HIT000321648"
/organism="Homo sapiens"
/mol_type="mRNA"
/clone_lib="lambda gt11"
/clone="PRDII-BF1"
/cell_line="MG63, HL60"
/db_xref="taxon:9606"
CDS 325..8478
/note="PRDII-BF1 protein (AA 1-2717)"
/db_xref="GOA:P15822"
/db_xref="H-InvDB:HIT000321648.14"
/db_xref="HGNC:HGNC:4920"
/db_xref="InterPro:IPR013087"
/db_xref="InterPro:IPR034729"
/db_xref="InterPro:IPR036236"
/db_xref="PDB:1BBO"
/db_xref="PDB:3ZNF"
/db_xref="PDB:4ZNF"
/db_xref="UniProtKB/Swiss-Prot:P15822"
/protein_id="CAA35798.1"
/translation="MPRTKQIHPRNLRDKIEEAQKELNGAEVSKKEILQAGVKGTSES
LKGVKRKKIVAENHLKKIPKSPLRNPLQAKHKQNTEESSFAVLHSASESHKKQNYIPV
KNGKQFTKQNGETPGIIAEASKSEESVSPKKPLFLQQPSELRRWRSEGADPAKFSDLD
EQCDSSSLSSKTRTDNSECISSHCGTTSPSYTNTAFDVLLKAMEPELSTLSQKGSPCA
IKTEKLRPNKTARSPPKLKNSSMDAPNQTSQELVAESQSSCTSYTVHMSAAQKNEQGA
MQSASHLYHQHEHFVPKSNQHNQQLPGCSGFTGSLTNLQNQENAKLEQVYNIAVTSSV
GLTSPSSRSQVTPQNQQMDSASPLSISPANSTQSPPMPIYNSTHVASVVNQSVEQMCN
LLLKDQKPKKQGKYICEYCNRACAKPSVLLKHIRSHTGERPYPCVTCGFSFKTKSNLY
KHKKSHAHTIKLGLVLQPDAGGLFLSHESPKALSIHSDVEDSGESEEEGATDERQHDL
GAMELQNVHIIKRMSNAETLLKSSFTPSSPENVIGDFLLQDRSAESQAVTELPKVVVH
HVTVSPLRTDSPKAMDPKPELSSAQKQKDLQVTNVQPLSANMSQGGVSRLETNENSHQ
KGDMNPLEGKQDSHVGTVHAQLQRQQATDYSQEQQGKLLSPRSLGSTDSGYFSRSESA
DQTVSPPTPFARRFPAQNKTLEGVTDPLQLLSPRQHPLLCHREKALLLPGQMRPPLAT
KTLEERISKLISDNEALVDDKQLDSVKPRRTSLSRRGSIDSPKSYIFKDSFQFDLKPV
GRRTSSSSDIPKSPFTPTEKSKQVFLLSVPSLDCLPITRSNSMPTTGYSAVPANIIPP
PHPLRGSQSFDDKIGAFYDDVFVSGPNAPVPQSGHPRTLVRQAAIEDSSANESHVLGT
GQSLDESHQGCHAAGEAMSVRSKALAQGPHIEKKKSHQGRGTMFECETCRNRYRKLEN
FENHKKFYCSELHGPKTKVAMREPEHSPVPGGLQPQILHYRVAGSSGIWEQTPQIRKR
RKMKSVGDDEELQQNESGTSPKSSEGLQFQNALGCNPSLPKHSVTIRSDQQHKNIQLQ
NSHIHLVARGPEQTMDPKLSTIMEQQISSAAQDKIELQRHGTGISVIQHTNSLSRPNS
FDKPEPFERASPVSFQELNRTGNSGSLKVIGISQEESHPSRDGSHPHQLALSDALRGE
LQESSRKSPSERHVLGQPSRLIRQHNIQVPEILVTEEPDRDLEAQCHDQEKSEKFSWP
QRSETLSKLPTEKLPPKKKRLRLAEIEHSSTESSFDSTLSRSLSRESSLSHTSSFSAS
LDIEDVSKTEASPKIDFLNKAEFLMIPAGLNTLNVPGCHREMRRTASEQINCTQTSME
VSDLRSKSFDCGSITPPQTTPLTELQPPSSPSRVGVTGHVPLLERRRGPLVRQISLGI
APDSHLSPVHPTSFQNTALPSVNAVPYQGPQLTSTSLAEFSANTLHSQTQVKDLQAET
SNSSSTNVFPVQQLCDINLLNQIHAPPSHQSTQLSLQVSTQGSKPDKNSVLSGSSKSE
DCFAPKYQLHCQVFTSGPSCSSNPVHSLPNQVISDPVGTDHCVTSATLPTKLIDSMSN
SHPLLPPELRPLGSQVQKVPSSFMLPIRLQSSVPAYCFATLTSLPQILVTQDLPNQPI
CQTNHSVVPISEEQNSVPTLQKGHQNALPNPEKEFLCENVFSEMSQNSSLSESLPITQ
KISVGRLSPQQESSASSKRMLSPANSLDIAMEKHQKRAKDENGAVCATDVRPLEALSS
RVNEASKQKKPILVRQVCTTEPLDGVMLEKDVFSQPEISNEAVNLTNVLPADNSSTGC
SKFVVIEPISELQEFENIKSSTSLTLTVRSSPAPSENTHLSPLKCTDNNQERKSPGVK
NQGDKVNIQEQSQRPVTSLSLFNIKDTQQLAFPSLKTTTNFTWCYLLRQKSLHLPQKD
QKTSAYTDWTVSASNPNPLGLPTKVALALLNSKQNTGKSLYCQAITTHSKSDLLVYSS
KWKSSLSKRALGNQKSTVVEFSNKDASEINSEQDKENSLIKSEPRRIKIFDGGYKSNE
EYVYIRGRGRGKYICEECGIRCKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTK
HMKSKAHSKKCVDLGISVGLIDEQDTEESDEKQRFSYERSGYDLEESDGPDEDDNENE
DDDEDSQAESVLSATPSVTASPQHLPSRSSLQDPVSTDEDVRITDCFSGVHTDPMDVL
PRALLTRMTVLSTAQSDYNRKTLSPGKARQRAARDENDTIPSVDTSRSPCHQMSVDYP
ESEEILRSSMAGKAVAITQSPSSVRLPPAAAEHSPQTAAGMPSVASPHPDPQEQKQQI
TLQPTPGLPSPHTHLFSHLPLHSQQQSRTPYNMVPVGGIHVVPAGLTYSTFVPLQAGP
VQLTIPAVSVVHRTLGTHRNTVTEVSGTTNPAGVAELSSVVPCIPIGQIRVPGLQNLS
TPGLQSLPSLSMETVNIVGLANTNMAPQVHPPGLALNAVGLQVLTANPSSQSSPAPQA
HIPGLQILNIALPTLIPSVSQVAVDAQGAPEMPASQSKACETQPKQTSVASANQVSRT
ESPQGLPTVQRENAKKVLNPPAPAGDHARLDGLSKMDTEKAASANHVKPKPELTSIQG
QPASTSQPLLKAHSEVFTKPSGQQTLSPDRQVPRPTGLPRRQPTVHFSDVSSDDDEDR
LVIAT"
misc_feature 8793..8798
/note="polyA signal"
BASE COUNT 2745 a 2164 c 1930 g 2181 t
ORIGIN
1 cgctgctggg cggcggcagg gtggcggacg gagcggggga ccggggagcg gcggccgcga
61 ggaggttatg tttgtgtttg gggttgtcaa gtgaaggagg gatcccaggc gccgccgccg
121 ccgccgcggg ggtcgcgaga tcccgagccg cggccgccgc catcagcagc gcagtccagg
181 gccggctgca gcggcagctc cgccgggcgt cctggcagca gcacatggat taattgatgt
241 atgttgagtt tatggagctg ccttttggtg gcttgcttta tctgcagttt ttaagaagaa
301 aaagaaggcc ctgagtcaaa gaagatgcct cgaactaaac aaattcatcc cagaaatcta
361 agagacaaaa ttgaagaagc acaaaaagaa cttaatgggg cagaagtttc aaaaaaagaa
421 atcttacagg ctggtgttaa aggaacttcg gaatccctta aaggtgtgaa acgcaaaaag
481 atcgtagctg agaatcacct gaaaaaaata ccaaaatccc cactgagaaa tcctcttcag
541 gcaaaacata aacaaaatac agaagagtca tctttcgccg ttcttcatag tgcttcggag
601 tctcacaaga aacagaatta tattcctgta aaaaatggga agcagtttac caaacaaaat
661 ggagaaacac ctggaataat tgctgaagcc tcaaaatctg aagaatctgt ctccccaaag
721 aagcccttgt ttctgcagca accatctgaa ctgcgtagat ggagatccga aggcgctgat
781 cctgccaaat tcagtgacct cgatgaacaa tgtgactcaa gttccttgtc aagtaaaacc
841 aggactgaca atagcgaatg catctcttct cattgtggca ctacgtcccc ctcctataca
901 aacactgcat tcgatgtctt actgaaagca atggagccag aactgagcac cttgtcacaa
961 aagggctcac cttgtgcaat taagacagaa aaactgaggc caaataaaac tgcacgttcc
1021 cctcccaaat taaaaaacag ttcaatggat gccccaaatc agacttcaca ggaattggtt
1081 gctgaatcac agtcttcttg tacctcatac acagtccata tgtctgctgc tcagaagaat
1141 gagcaagggg caatgcagtc agcttctcat ttgtatcatc aacatgaaca ctttgttccc
1201 aaatccaacc aacataatca acagcttccg gggtgttcag gtttcacagg atcactgaca
1261 aatctgcaaa atcaagagaa tgccaaactt gaacaggttt ataatatagc agtgacatca
1321 tctgtaggcc taacttcacc ttccagtaga tctcaggtta ctcctcaaaa ccagcaaatg
1381 gattctgctt cacctttgtc aataagtccg gctaattcta cacagtcgcc ccccatgcca
1441 atctataatt caactcatgt tgcctctgtt gttaatcaaa gcgtagagca aatgtgcaat
1501 cttcttctga aagatcagaa gccaaaaaaa caaggaaaat atatttgtga gtattgcaat
1561 agagcatgtg caaagcctag tgtgctttta aagcatatcc gctcccacac tggagagcga
1621 ccctatccct gtgtgacttg tggattttca tttaagacta aaagtaatct gtataagcac
1681 aagaaatccc acgcacatac tatcaaactg ggtcttgtct tgcaaccaga tgctggtggc
1741 ttgttcttgt cccacgagtc ccccaaagca cttagtattc attcagacgt agaagacagt
1801 ggggagagcg aggaggaagg cgccactgat gagagacagc atgacctggg cgccatggag
1861 ctgcagaatg tgcacataat aaagaggatg tcaaatgctg aaactttact aaaatcaagc
1921 ttcactccaa gcagtccaga aaatgtgata ggtgactttt tgctacagga cagatctgca
1981 gaatcacaag ctgtgacaga gttaccgaaa gttgtggtcc accatgtcac tgtgtccccc
2041 ttaagaactg acagtccaaa ggccatggat cccaagcctg aactttctag tgcacaaaag
2101 cagaaggacc ttcaggtgac aaacgtacag ccactttcag ccaacatgtc ccagggtgga
2161 gtctccaggt tggagactaa tgagaattcc caccagaaag gcgacatgaa tccactggaa
2221 ggaaagcaag actctcacgt aggaacggta cacgcccagc tacaaaggca gcaggctacc
2281 gattactccc aagagcagca aggaaagctc ctgagtcctc gaagtttagg aagtacggat
2341 tctggttact tttcacgttc tgaaagtgcc gatcaaacag tgagtccacc aactcccttt
2401 gccagaaggt tcccagcaca gaacaagact ctggaaggag taacggaccc tctgcagctc
2461 ttgtcaccac gtcaacaccc tctgctttgc cacagggaaa aggcattgct tttaccaggt
2521 cagatgcgcc cacctttggc cacaaaaaca cttgaggagc ggatatcgaa gcttatctca
2581 gacaatgaag ctttggtaga tgacaagcaa ctggatagtg tgaagccgcg gagaacctca
2641 ctgtcaagac gaggaagcat tgattccccc aaatcataca tatttaaaga ttctttccag
2701 tttgatttaa aaccagtggg acggagaaca agttcaagct ctgatatacc gaagtcacct
2761 ttcaccccta ctgaaaaatc aaagcaagtg tttcttctgt ctgtaccttc acttgactgt
2821 ttacctatca caagaagtaa ttccatgccg accacaggtt attcagcagt acctgcaaat
2881 ataatacctc ctcctcatcc actaagagga agtcagtcat ttgatgacaa aattggcgct
2941 ttctatgatg atgtctttgt atcgggacct aacgctcctg tgccccagag tgggcatccc
3001 cgtacacttg tgagacaagc agccatagaa gactcttcag caaatgaaag tcatgttctt
3061 ggtactggac agtccctgga tgagagccac caaggatgcc atgctgctgg tgaagccatg
3121 tcagtgagga gcaaggcact ggcacaaggc ccacatatag aaaaaaagaa gtctcatcaa
3181 gggcgaggga caatgtttga gtgtgaaact tgtagaaaca ggtataggaa actggaaaat
3241 tttgaaaatc ataagaaatt ttactgttct gagttacatg gaccaaaaac aaaggtagcc
3301 atgagagaac ctgagcacag ccctgtgccc ggcggtctgc aacctcagat tctacactac
3361 agagtcgctg ggtcctccgg catctgggaa cagacgcccc agataagaaa aaggaggaaa
3421 atgaaaagtg ttggggatga tgaagaactt cagcaaaatg aaagtggaac atctccaaaa
3481 agttctgaag gccttcagtt tcagaatgct ctgggctgta atcccagttt gcctaaacat
3541 agtgttacca taagaagtga ccagcagcat aaaaatatac agttgcaaaa ctcccatatt
3601 caccttgttg ccaggggccc tgagcagacc atggatccca agctgtcgac catcatggaa
3661 caacagataa gttcagcagc ccaggacaag atagaactgc agagacacgg aactggaatc
3721 tctgtcatcc agcacaccaa ctccctgagc aggcccaact catttgacaa gcctgagcct
3781 tttgaaagag cctccccagt ttctttccag gagctgaata gaacggggaa ttccgggtct
3841 ctaaaagtga taggaatctc ccaagaggaa agtcaccctt ctcgggacgg gtctcatcct
3901 caccagcttg cactatcaga cgctctcaga ggagaacttc aggaaagctc cagaaagagt
3961 ccaagtgaac gacatgtgtt aggacagccc tcaagactta tccggcagca caacatccaa
4021 gttccagaga ttttggtcac agaagaacca gatcgagacc tggaagctca atgccatgat
4081 caagaaaagt cagagaagtt cagttggccc cagcgtagtg aaaccttgtc aaaattgcca
4141 acagagaaac tgccacccaa aaagaaaagg ctccgtctgg ctgagataga acattcctca
4201 acagaatcga gctttgattc cactctctcc aggagtctaa gtagggagag cagtttatct
4261 cacacttcaa gtttctcagc ctctttagac atagaggacg tttctaaaac ggaggcttcc
4321 cccaaaatcg attttctaaa taaagccgag tttcttatga ttccagctgg cttgaatact
4381 ctgaatgttc ctggatgtca ccgggaaatg aggcgtactg catcagaaca gattaattgc
4441 acgcaaacgt caatggaggt ctctgatctc agaagcaaat cattcgattg tggaagcatc
4501 accccacccc agacaacacc acttactgaa ttgcagcctc catcttcacc ttctcgagtg
4561 ggagtgactg ggcatgtgcc tctcttagaa agaaggagag gcccactggt acggcaaata
4621 tctttgggca tagccccaga tagtcatctg tctcctgtac acccaacatc tttccaaaat
4681 actgctcttc ccagtgtgaa tgcagtgcca tatcaggggc ctcagctcac tagtacatct
4741 ttagctgagt tttctgcaaa tactttgcac tctcagactc aggttaagga tctgcaggca
4801 gaaacatcaa actccagctc taccaacgtt tttcctgttc aacagctctg tgatatcaat
4861 ttgttaaatc aaatccatgc accgcctagc caccagagca cacagctatc tctgcaagtg
4921 tctacgcagg gtagcaagcc agataaaaat tctgttttat ctgggtcttc taaaagtgag
4981 gattgctttg ctcccaaata ccaattgcat tgtcaggttt tcacttcagg cccatcttgc
5041 tcttctaatc ctgtgcattc tttgccaaat caagttattt cagatccagt tggaacagat
5101 cattgtgtga catcagcaac attaccaacc aaattaattg acagcatgtc taattcgcat
5161 cctctgctac caccagagct caggcccctt ggaagtcagg tgcagaaggt gccatcatca
5221 ttcatgctgc ccatacgcct gcagagtagt gttcctgctt actgttttgc tacactcaca
5281 tccctgccac aaatactagt gacccaagat ctgcccaatc agccaatttg ccagactaat
5341 catagtgtag tgccaatcag tgaagaacaa aattctgtgc caacattaca aaaaggtcat
5401 cagaatgctt tgccaaaccc agagaaggaa tttctatgtg aaaatgtttt ttcagagatg
5461 agccaaaatt cttctctatc agaatccttg cccataactc agaaaatatc tgttggtcga
5521 ctttcccctc aacaagaatc ttcagcttcg agtaaaagga tgctttcccc agcaaatagt
5581 ttagacattg ccatggaaaa gcaccagaag cgggccaaag atgaaaatgg agctgtttgt
5641 gcaacagacg tgagaccttt agaggctttg agttcgagag ttaatgaagc tagtaaacag
5701 aagaagccta ttttagtgag acaggtttgt actacagagc ccctggacgg tgtgatgttg
5761 gaaaaggatg ttttttctca acctgaaatt agtaatgagg ctgttaattt gacaaatgtt
5821 ttaccagctg ataattcatc aacaggatgc tctaaatttg tcgttataga acctataagt
5881 gaattgcagg aatttgaaaa catcaagtca tccacatcat taactcttac agttcgaagt
5941 tcacctgctc cttcagaaaa tactcatctt tctcctttga aatgtacaga caataaccaa
6001 gaaaggaagt ctccaggggt taaaaatcaa ggtgacaaag tgaacatcca agagcaaagt
6061 caacggccag tcacttctct ttcattgttt aacatcaagg acacccagca gctggctttc
6121 cctagcctga aaactacaac caactttaca tggtgttatc tcttaaggca gaagtcgttg
6181 catttgcctc agaaggacca gaaaacttca gcctatactg attggacagt aagcgccagt
6241 aatccaaatc cactcggttt gcccacaaaa gttgcacttg ctctccttaa ttcaaaacag
6301 aacactggaa aatcactata ctgtcaagca ataactaccc attccaagtc agacttattg
6361 gtctattcaa gcaagtggaa aagcagctta agcaagagag cattaggtaa tcaaaagtcc
6421 acagtagttg aattcagcaa taaagatgcc tctgaaatta acagtgagca agataaagaa
6481 aattccttaa tcaaaagtga accaagaaga attaaaatat ttgatggagg atataagtca
6541 aatgaagagt atgtatatat ccgaggcagg ggaagaggaa aatacatttg tgaagaatgt
6601 ggaatacgtt gtaagaaacc tagcatgtta aagaaacaca tacgaaccca tacagatgtc
6661 cgcccctacc actgcactta ctgtaacttc tcctttaaga ctaaaggaaa tctgacaaaa
6721 cacatgaagt ccaaggcaca tagcaagaaa tgtgtggatt taggcatctc agtaggttta
6781 atagatgaac aggatacaga agaatcagat gaaaaacaga gattcagtta tgagcgatct
6841 ggatatgatc ttgaagaatc tgatggccca gatgaggatg acaatgaaaa tgaagacgat
6901 gatgaggaca gccaggctga atcagtcctg tcagccacac cctcagtcac agctagcccg
6961 cagcaccttc catctagaag tagccttcag gaccctgtga gtactgacga ggatgtcagg
7021 atcaccgatt gcttttctgg ggtacacacg gacccaatgg acgttctgcc cagggcgctg
7081 ctcaccagaa tgactgtcct gagcacagca cagtctgact acaataggaa gacactctct
7141 ccggggaagg ccaggcagcg tgctgcgaga gatgaaaacg acacaattcc gtctgtagac
7201 acttccaggt ccccgtgtca tcagatgtct gtggactacc ctgagtcaga agaaattctg
7261 agaagttcta tggcaggaaa agctgttgct ataacacaga gcccatcatc tgtaagactt
7321 cctcctgctg cagctgagca cagcccccag acagcagcgg ggatgccttc tgtggcctca
7381 ccacatcctg accctcaaga acagaagcag caaataactc tacagccgac tccaggcttg
7441 ccttctcccc acactcattt gtttagccac cttcctttgc attcccagca gcaatcgagg
7501 acaccttata atatggttcc agttgggggg atccatgtgg tacctgctgg cctcacatac
7561 tccacgtttg tgccccttca ggctggacca gtgcagctca cgatccctgc tgtcagtgtc
7621 gttcacagaa ctttgggtac tcataggaat acggtcacag aagtgtctgg cactacaaac
7681 cctgctggag tggctgaatt aagcagtgtt gtgccatgta ttcctatcgg ccaaatccgc
7741 gtgccaggcc ttcagaacct aagtacccca ggcttgcagt cactcccctc gttaagcatg
7801 gaaaccgtca atattgtagg cctagccaat acaaatatgg ccccacaagt ccatccacca
7861 ggactggctc tgaatgctgt cggactgcag gttctgactg caaacccttc atcacaaagc
7921 agccccgccc ctcaggcaca cattccaggt ctccagatct tgaacatagc attgcccacc
7981 ttaatcccct cagtcagtca agtagccgtt gatgcacagg gagctccaga aatgccagct
8041 tcccaaagca aagcatgcga gacacaaccc aagcagactt ctgtagccag cgcaaaccag
8101 gtcagcagga ccgagtctcc tcaggggtta cctacagtcc agcgggaaaa tgcaaaaaaa
8161 gttctgaatc cacctgcccc tgcaggtgac catgcaaggc ttgatggcct gagtaaaatg
8221 gacacagaga aggctgcctc ggcaaatcac gtgaagccca agcctgaact cacttccata
8281 cagggccaac cagcgtccac gtcacaacct ctgctgaagg cacattctga agtttttaca
8341 aagccctcag gccagcagac tctctctcca gacagacagg ttcccaggcc cacaggacta
8401 ccgcggaggc agcccactgt gcacttcagc gacgtgagca gcgatgatga cgaggacagg
8461 cttgtgatag caacctgatg gattttattt tttatttgct ttttttttat ataacactta
8521 aaggtttctt tgaaaaccct cctttcctta aagcacattt ttctgacata aactcatgac
8581 taatctttgt gcaatcatga acttttgacc aataattgtt gttttgtgtc agctccagcc
8641 atttttgtac atgttgtata gacaattgtg ccttttagga gctttatgtt tagaaactgt
8701 acagattgtt gaatatctat atacataaaa atatattata tatgtatatg aaaaccaggt
8761 agttatttgt gtttagtaag gaaaacctgt caaataaatc aaatgattaa attatatgtt
8821 ccactgttga atataaattt tatggctatg gggcagagtt tctgtgtata aattagtatg
8881 taaactccat atttatgtat tcatattagt ctttgaaaat gggtctgtcc tccttgtgta
8941 agacagtaac tttacacttc agacagattt tctgtgttat gaaatgtttc agtaaaatat
9001 tgtttactga cctttaaaaa
//