LOCUS X13839 1330 bp mRNA linear HUM 07-OCT-2008
DEFINITION Human mRNA for vascular smooth muscle alpha-actin.
ACCESSION X13839
VERSION X13839.1
KEYWORDS alpha-actin.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1330)
AUTHORS Kamada S.
JOURNAL Submitted (26-DEC-1988) to the INSDC. Kamada S., Dept of Oncogene
Research, Research Institute for Microbial Diseases, Osaka
University, 3-1 Yamadoako, Suita, Osaka 565, Japan, y, j.
REFERENCE 2 (bases 1 to 1330)
AUTHORS Kamada S., Kakunaga T.
TITLE The nucleotide sequence of a human smooth muscle alpha-actin
(aortic type) cDNA
JOURNAL Nucleic Acids Res. 17(4), 1767-1767(1989).
PUBMED 2701935
REFERENCE 3
AUTHORS Harris D.E., Warshaw D.M., Periasamy M.
TITLE Nucleotide sequences of the rabbit alpha-smooth-muscle and
beta-non-muscle actin mRNAs
JOURNAL Gene 112(2), 265-266(1992).
PUBMED 1555776
COMMENT clone=pHSMalpha-A-2;
Data kindly reviewed (03-Mar-1989) by Kamada S.
FEATURES Location/Qualifiers
source 1..1330
/db_xref="H-InvDB:HIT000321393"
/organism="Homo sapiens"
/mol_type="mRNA"
/clone_lib="cDNA"
/tissue_type="artery of umbilical cord"
/db_xref="taxon:9606"
CDS 48..1181
/note="alpha-actin (AA 1-377)"
/db_xref="GOA:P62736"
/db_xref="H-InvDB:HIT000321393.13"
/db_xref="HGNC:HGNC:130"
/db_xref="InterPro:IPR004000"
/db_xref="InterPro:IPR004001"
/db_xref="InterPro:IPR020902"
/db_xref="UniProtKB/Swiss-Prot:P62736"
/protein_id="CAA32064.1"
/translation="MCEEEDSTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQG
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEE
HPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDG
VTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKL
CYVALDFENEMATAASSSSLEKSYELPDGQVITIGNERFRCPETLFQPSFIGMESAGI
HETTYNSIMKCDIDIRKDLYANNVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP
PERKYSVWIGGSILASLSTFQQMWISKQEYDEAGPSIVHRKCF"
misc_feature 1304..1309
/note="pot. polyA signal"
polyA_site 1330..1330
/note="polyA site"
BASE COUNT 327 a 363 c 325 g 315 t
ORIGIN
1 gcagcccagc caagcactgt caggaatcct gtgaagcagc tccagctatg tgtgaagaag
61 aggacagcac tgccttggtg tgtgacaatg gctctgggct ctgtaaggcc ggctttgctg
121 gggacgatgc tcccagggct gttttcccat ccattgtggg acgtcccaga catcaggggg
181 tgatggtggg aatgggacaa aaagacagct acgtgggtga cgaagcacag agcaaaagag
241 gaatcctgac cctgaagtac ccgatagaac atggcatcat caccaactgg gacgacatgg
301 aaaagatctg gcaccactct ttctacaatg agcttcgtgt tgcccctgaa gagcatccca
361 ccctgctcac ggaggcaccc ctgaacccca aggccaaccg ggagaaaatg actcaaatta
421 tgtttgagac tttcaatgtc ccagccatgt atgtggctat ccaggcggtg ctgtctctct
481 atgcctctgg acgcacaact ggcatcgtgc tggactctgg agatggtgtc acccacaatg
541 tccccatcta tgagggctat gccttgcccc atgccatcat gcgtctggat ctggctggcc
601 gagatctcac tgactacctc atgaagatcc tgactgagcg tggctattcc ttcgttacta
661 ctgctgagcg tgagattgtc cgggacatca aggagaaact gtgttatgta gctctggact
721 ttgaaaatga gatggccact gccgcatcct catcctccct tgagaagagt tacgagttgc
781 ctgatgggca agtgatcacc atcggaaatg aacgtttccg ctgcccagag accctgttcc
841 agccatcctt catcgggatg gagtctgctg gcatccatga aaccacctac aacagcatca
901 tgaagtgtga tattgacatc aggaaggacc tctatgctaa caatgtccta tcagggggca
961 ccactatgta ccctggcatt gccgaccgaa tgcagaagga gatcacggcc ctagcaccca
1021 gcaccatgaa gatcaagatc attgcccctc cggagcgcaa atactctgtc tggatcggtg
1081 gctccatcct ggcctctctg tccaccttcc agcagatgtg gatcagcaaa caggaatacg
1141 atgaagccgg gccttccatt gtccaccgca aatgcttcta aaacactttc ctgctcctct
1201 ctgtctctag cacacaactg tgaatgtcct gtggaattat gccttcagtt cttttccaaa
1261 tcattcctag ccaaagctct gactcgttac ctatgtgttt tttaataaat ctgaaatagg
1321 ctactggtaa
//