LOCUS X13783 2142 bp mRNA linear HUM 05-AUG-1995
DEFINITION Human mRNA for alpha-1 type 2 collagen.
ACCESSION X13783
VERSION X13783.1
KEYWORDS collagen; collagen alpha 1 type II; collagen type II.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2142)
AUTHORS Ramirez F.
JOURNAL Submitted (20-DEC-1988) to the INSDC. F. Ramirez, SUNY Health
Science Center at Brooklyn, Dept. of Microbiology and Immunology,
Box 44, 450 Clarkson Avenue, Brooklyn, NY 11203, USA.
COMMENT See also entries X03319, X03320, X02371 - X02378
Data kindly reviewed (15/6/89) by Ramirez F.
FEATURES Location/Qualifiers
source 1..2142
/db_xref="H-InvDB:HIT000321389"
/organism="Homo sapiens"
/chromosome="12q13.1-12q13.3"
/mol_type="mRNA"
/clone_lib="lambda gt1"
/clone="HC-2"
/db_xref="taxon:9606"
CDS <1..>2142
/codon_start=1
/product="alpha-1 type 2 collagen (714 AA)"
/db_xref="GOA:P02458"
/db_xref="H-InvDB:HIT000321389.13"
/db_xref="HGNC:HGNC:2200"
/db_xref="InterPro:IPR000885"
/db_xref="InterPro:IPR001007"
/db_xref="InterPro:IPR008160"
/db_xref="PDB:1U5M"
/db_xref="PDB:2FSE"
/db_xref="PDB:2SEB"
/db_xref="PDB:5NIR"
/db_xref="PDB:5OCX"
/db_xref="PDB:5OCY"
/db_xref="PDB:6BIN"
/db_xref="UniProtKB/Swiss-Prot:P02458"
/protein_id="CAA32030.1"
/translation="GPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGA
NGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPGVM
GFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAEGPPGPAGPAGERGEQGAPG
PSGFQGLPGPPGPPGEAGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSPGAQGLQGP
RGLPGTPGTDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPE
GAPGKDGARGLTGPIGPPGPAGANGEKGEVGPPGPAGSAGARGAPGERGETGPPGPAG
FAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGP
PGATGFPGAAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGEPGLQGPA
GPPGEKGEPGDDGPSGAEGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGQQG
APGASGDRGPPGPVGPPGLTGPAGEPGREGSPGADGPPGRDGAAGVKGDRGETGAVGA
PGAPGPPGSPGPAGPTGKQGDRGEAGAQGPMGPSGPAGARGIQGPQGPRGDKGEAGEP
GERGLKGHRGFTGLQGLPGPPGPSGDQGASGPAGPSGPRGPPGPVGPSGKDGANGIPG
PIGPPGPRGRSGETGPAGPPGNPGPPGPPGPP"
misc_feature 1..2142
/note="triple helical domain"
BASE COUNT 345 a 665 c 758 g 374 t
ORIGIN
1 gggcccatcg gtccccctgg agaaagaggt gctcccggca accgcggttt cccaggtcaa
61 gatggtctgg caggtcccaa gggagcccct ggagagcgag ggcccagtgg tcttgctggc
121 cccaagggag ccaacggtga ccctggccgt cctggagaac ctggccttcc tggagcccgg
181 ggtctcactg gccgccctgg tgatgctggt cctcaaggca aagttggccc ttctggagcc
241 cctggtgaag atggtcgtcc tggacctcca ggtcctcagg gggctcgtgg gcagcctggt
301 gtcatgggtt tccctggccc caaaggtgcc aacggtgagc ctggcaaagc tggtgagaag
361 ggactgcctg gtgctcctgg tctgaggggt cttcctggca aagatggtga gacaggtgct
421 gaaggccccc ctggccctgc tggacctgct ggtgaacgag gcgagcaggg tgctcctggg
481 ccatctgggt tccagggact tcctggccct cctggtcccc caggtgaagc tggaaaacca
541 ggtgaccagg gtgttcccgg tgaagctgga gcccctggac tagtgggtcc caggggtgaa
601 cgaggtttcc caggtgaacg tggctctccc ggtgcccagg gcctccaggg tccccgtggc
661 ctccccggca ctcctggcac tgatggtccc aaaggtgcat ctggcccagc aggcccccct
721 ggggctcagg gccctccagg tcttcaggga atgcctggcg agaggggagc agctggtatc
781 gctgggccca aaggcgacag gggtgacgtt ggtgagaaag gccctgaggg agcccctgga
841 aaggatggtg cacgaggcct gacaggtccc attggccccc ctggcccagc tggtgctaat
901 ggcgagaagg gagaagttgg acctcctggt cctgcaggaa gtgctggtgc tcgtggcgct
961 ccgggtgaac gtggagagac tgggcccccc ggaccagcgg gatttgctgg gcctcctggt
1021 gctgatggcc agcctggggc caagggtgag caaggagagg ccggccagaa aggcgatgct
1081 ggtgcccctg gtcctcaggg cccctctgga gcacctgggc ctcagggtcc tactggagtg
1141 actggtccta aaggagcccg aggtgcccaa ggccccccgg gagccactgg attccctgga
1201 gctgctggcc gcgttggacc cccaggctcc aatggcaacc ctggaccccc tggtccccct
1261 ggtccttctg gaaaagatgg tcccaaaggt gctcgaggag acagcggccc ccctggccga
1321 gctggtgaac ccggcctcca aggtcctgct ggaccccctg gcgagaaggg agagcctgga
1381 gatgacggtc cctctggtgc cgaaggtcca ccaggtcccc agggtctggc tggtcagaga
1441 ggcatcgtcg gtctgcctgg gcaacgtggt gagagaggat tccctggctt gcctggcccg
1501 tcgggtgagc ccggccagca gggtgctcct ggagcatctg gagacagagg tcctcctggc
1561 cccgtgggtc ctcctggcct gacgggtcct gcaggtgaac ctggacgaga gggaagcccc
1621 ggtgctgatg gcccccctgg cagagatggc gctgctggag tcaagggtga tcgtggtgag
1681 actggtgctg tgggagctcc tggagcccct gggccccctg gctcccctgg ccccgctggt
1741 ccaactggca agcaaggaga cagaggagaa gctggtgcac aaggccccat gggaccctca
1801 ggaccagctg gagcccgggg aatccagggt cctcaaggcc ccagaggtga caaaggagag
1861 gctggagagc ctggcgagag aggcctgaag ggacaccgtg gcttcactgg tctgcagggt
1921 ctgcccggcc ctcctggtcc ttctggagac caaggtgctt ctggtcctgc tggtccttct
1981 ggccctagag gtcctcctgg ccccgtcggt ccctctggca aagatggtgc taatggaatc
2041 cctggcccca ttgggcctcc tggtccccgt ggacgatcag gcgaaaccgg ccctgctggt
2101 cctcctggaa atcctggacc ccctggtcct ccaggtcccc ct
//