LOCUS X13403 2584 bp mRNA linear HUM 07-OCT-2008
DEFINITION Human mRNA for octamer-binding protein Oct-1.
ACCESSION X13403
VERSION X13403.1
KEYWORDS DNA-binding protein; homeobox; Oct-1 gene.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2584)
AUTHORS Sturm R.A.
JOURNAL Submitted (28-OCT-1988) to the INSDC. Sturm R.A., Cold Spring
Harbor Lab, PO Box 100, Cold Spring Harbor, New York 11724, USA.
REFERENCE 2 (bases 1 to 2584)
AUTHORS Sturm R.A., Das G., Herr W.
TITLE The ubiquitous octamer-binding protein Oct-1 contains a POU domain
with a homeo box subdomain
JOURNAL Genes Dev. 2(12A), 1582-1599(1988).
PUBMED 2905684
FEATURES Location/Qualifiers
source 1..2584
/db_xref="H-InvDB:HIT000321365"
/organism="Homo sapiens"
/mol_type="mRNA"
/clone_lib="lambda gt10 and 11"
/clone="lambda C7 and lambda C5"
/cell_line="NTera2D1"
/cell_type="teratocarcinoma"
/db_xref="taxon:9606"
CDS 60..2291
/note="Oct-1 protein (AA 1 - 743)"
/db_xref="GOA:P14859"
/db_xref="H-InvDB:HIT000321365.13"
/db_xref="HGNC:HGNC:9212"
/db_xref="InterPro:IPR000327"
/db_xref="InterPro:IPR000972"
/db_xref="InterPro:IPR001356"
/db_xref="InterPro:IPR009057"
/db_xref="InterPro:IPR010982"
/db_xref="InterPro:IPR013847"
/db_xref="InterPro:IPR017970"
/db_xref="PDB:1CQT"
/db_xref="PDB:1E3O"
/db_xref="PDB:1GT0"
/db_xref="PDB:1HF0"
/db_xref="PDB:1O4X"
/db_xref="PDB:1OCT"
/db_xref="PDB:1POG"
/db_xref="PDB:1POU"
/db_xref="UniProtKB/Swiss-Prot:P14859"
/protein_id="CAA31767.1"
/translation="MNNPSETSKPSMESGDGNTGTQTNGLDFQKQPVPVGGAISTAQA
QAFLGHLHQVQLAGTSLQAAAQSLNVQSKSNEESGDSQQPSQPSQQPSVQAAIPQTQL
MLAGGQITGLTLTPAQQQLLLQQAQAQAQLLAAAVQQHSASQQHSAAGATISASAATP
MTQIPLSQPIQIAQDLQQLQQLQQQNLNLQQFVLVHPTTNLQPAQFIISQTPQGQQGL
LQAQNLQTQLPQQSQANLLQSQPSITLTSQPATPTRTIAATPIQTLPQSQSTPKRIDT
PSLEEPSDLEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNL
SFKNMCKLKPLLEKWLNDAENLSSDSSLSSPSALNSPGIEGLSRRRKKRTSIETNIRV
ALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRINPPSSGGTSSSPI
KAIFPSPTSLVATTPSLVTSSAATTLTVSPVLPLTSAAVTNLSVTGTSDTTSNNTATV
ISTAPPASSAVTSPSLSPSPSASASTSEASSASETSTTQTTSTPLSSPLGTSQVMVTA
SGLQTAAAAALQGAAQLPANASLAAMAAAAGLNPSLMAPSQFAAGGALLSLNPGTLSG
ALSPALMSNSTLATIQALASGGSLPITSLDATGNLVFANAGGAPNIVTAPLFLNPQNL
SLLTSNPVSLVSAAAASAGNSAPVASLHATSTSAESIQNSLFTVASASGAASTTTTAS
KAQ"
misc_feature 866..1380
/note="DNA-binding domain"
misc_feature 894..1121
/note="POU specific box (AA 279-354)"
misc_feature 1194..1373
/note="homeo box (AA 379-438)"
misc_feature 2359..2364
/note="pot. polyA signal"
misc_feature 2509..2514
/note="pot.alt. polyA signal"
BASE COUNT 704 a 782 c 578 g 520 t
ORIGIN
1 gaggagcagc gagtcaagat gagagttcag ccgcggcggc agcagcagca gactcaagaa
61 tgaacaatcc gtcagaaacc agtaaaccat ctatggagag tggagatggc aacacaggca
121 cacaaaccaa tggtctggac tttcagaagc agcctgtgcc tgtaggagga gcaatctcaa
181 cagcccaggc gcaggctttc cttggacatc tccatcaggt ccaactcgct ggaacaagtt
241 tacaggctgc tgctcagtct ttaaatgtac agtctaaatc taatgaagaa tcgggggatt
301 cgcagcagcc aagccagcct tcccagcagc cttcagtgca ggcagccatt ccccagaccc
361 agcttatgct agctggagga cagataactg ggcttacttt gacgcctgcc cagcaacagt
421 tactactcca gcaggcacag gcacaggcac agctgctggc tgctgcagtg cagcagcact
481 ccgccagcca gcagcacagt gctgctggag ccaccatctc cgcctctgct gccacgccca
541 tgacgcagat ccccctgtct cagcccatac agatcgcaca ggatcttcaa caactgcaac
601 agcttcaaca gcagaatctc aacctgcaac agtttgtgtt ggtgcatcca accaccaatt
661 tgcagccagc gcagtttatc atctcacaga cgccccaggg ccagcagggt ctcctgcaag
721 cgcaaaatct tcaaacgcaa ctacctcagc aaagccaagc caacctccta cagtcgcagc
781 caagcatcac cctcacctcc cagccagcaa ccccaacacg cacaatagca gcaaccccaa
841 ttcagacact tccacagagc cagtcaacac caaagcgaat tgatactccc agcttggagg
901 agcccagtga ccttgaggag cttgagcagt ttgccaagac cttcaaacaa agacgaatca
961 aacttggatt cactcagggt gatgttgggc tcgctatggg gaaactatat ggaaatgact
1021 tcagccaaac taccatctct cgatttgaag ccttgaacct cagctttaag aacatgtgca
1081 agttgaagcc acttttagag aagtggctaa atgatgcaga gaacctctca tctgattcgt
1141 ccctctccag cccaagtgcc ctgaattctc caggaattga gggcttgagc cgtaggagga
1201 agaaacgcac cagcatagag accaacatcc gtgtggcctt agagaagagt ttcttggaga
1261 atcaaaagcc tacctcggaa gagatcacta tgattgctga tcagctcaat atggaaaaag
1321 aggtgattcg tgtttggttc tgtaaccgcc gccagaaaga aaaaagaatc aacccaccaa
1381 gcagtggtgg gaccagcagc tcacctatta aagcaatttt ccccagccca acttcactgg
1441 tggcgaccac accaagcctt gtgactagca gtgcagcaac taccctcaca gtcagccctg
1501 tcctccctct gaccagtgct gctgtgacga atctttcagt tacaggcact tcagacacca
1561 cctccaacaa cacagcaacc gtgatttcca cagcgcctcc agcttcctca gcagtcacgt
1621 ccccctctct gagtccctcc ccttctgcct cagcctccac ctccgaggca tccagtgcca
1681 gtgagaccag cacaacacag accacctcca ctcctttgtc ctcccctctt gggaccagcc
1741 aggtgatggt gacagcatca ggtttgcaaa cagcagcagc tgctgccctt caaggagctg
1801 cacagttgcc agcaaatgcc agtcttgctg ccatggcagc tgctgcagga ctaaacccaa
1861 gcctgatggc accctcacag tttgcggctg gaggtgcctt actcagtctg aatccaggga
1921 ccctgagcgg tgctctcagc ccagctctaa tgagcaacag tacactggca actattcaag
1981 ctcttgcttc tggtggctct cttccaataa catcacttga tgcaactggg aacctggtat
2041 ttgccaatgc gggaggagcc cccaacatcg tgactgcccc tctgttcctg aaccctcaga
2101 acctctctct gctcaccagc aaccctgtta gcttggtctc tgccgccgca gcatctgcag
2161 ggaactctgc acctgtagcc agccttcacg ccacctccac ctctgctgag tccatccaga
2221 actctctctt cacagtggcc tctgccagcg gggctgcgtc caccaccacc accgcctcca
2281 aggcacagtg agctgggcag agctgggctg ccagaagcct ttttcactct gcagtgtgat
2341 tggactgcca gccaggttaa taaactgaaa aatgtgattg gcttcctctc gccgtgttgt
2401 gagggcaaag gagagaaggg agaaaaaaaa aaaaaaaacc acacacaccc atacacaata
2461 taccagaaaa ggaaggaagg atggagacgg aacatttgcc taatttgtaa taaaacactg
2521 tcttttcagg gttgcttcat gggttggagg actttctaac caaaaattaa aaaaaaaaaa
2581 aaaa
//