LOCUS X07698 1111 bp mRNA linear ROD 03-APR-1995 DEFINITION Mouse mRNA for CD8 molecule Ly-3 chain. ACCESSION X07698 VERSION X07698.1 KEYWORDS CD8 antigen; cell surface antigen; glycoprotein; immunoglobulin superfamily; Ly-3 protein; T-cell surface glycoprotein. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 1111) AUTHORS Blanc D., Bron C., Gabert J., Letourneur F., MacDonald H.R., Malissen B. TITLE Gene transfer of the Ly-3 chain gene of the mouse CD8 molecular complex: co-transfer with the Ly-2 polypeptide gene results in detectable cell surface expression of the Ly-3 antigenic determinants JOURNAL Eur. J. Immunol. 18(4), 613-619(1988). PUBMED 2452747 COMMENT The region from amino acid 22 to 136 shows clear homology to Ig and T cell receptor variable (V) regions. Data kindly reviewed (06-Mar-1989) by Malissen B. FEATURES Location/Qualifiers source 1..1111 /organism="Mus musculus" /mol_type="mRNA" /clone_lib="KB5-C20 CTL" /clone="pLy-3-23.1" /db_xref="taxon:10090" CDS 50..691 /note="Ly-3 precursor protein" /db_xref="GOA:P10300" /db_xref="InterPro:IPR003599" /db_xref="InterPro:IPR007110" /db_xref="InterPro:IPR013106" /db_xref="InterPro:IPR013783" /db_xref="InterPro:IPR036179" /db_xref="InterPro:IPR042414" /db_xref="MGI:MGI:88347" /db_xref="PDB:2ATP" /db_xref="PDB:3B9K" /db_xref="PDB:3DMM" /db_xref="UniProtKB/Swiss-Prot:P10300" /protein_id="CAA30537.1" /translation="MQPWLWLVFSMKLAALWSSSALIQTPSSLLVQTNHTAKMSCEVK SISKLTSIYWLRERQDPKDKYFEFLASWSSSKGVLYGESVDKKRNIILESSDSRRPFL SIMNVKPEDSDFYFCATVGSPKMVFGTGTKLTVVDVLPTTAPTKKTTLKMKKKKQCPF PHPETQKGLTCSLTTLSLLVVCILLLLAFLGVAVYFYCVRRRARIHFMKQFHK" sig_peptide 50..112 /note="leader peptide (AA -21 to -1)" mat_peptide 113..688 /note="mat. CD8 Ly-3 chain (AA 1-192)" BASE COUNT 288 a 296 c 273 g 254 t ORIGIN 1 tttcagttga cagagcactg aggggaacag tgtccccaaa agcgccaaga tgcagccatg 61 gctctggctg gtcttcagta tgaagctggc agctctctgg agcagctctg ccctcattca 121 gaccccttcg tccctgctgg ttcaaaccaa ccatacggca aagatgtcct gtgaggttaa 181 aagcatctct aagttaacaa gcatctactg gctgcgggag cgccaggacc ccaaggacaa 241 gtactttgag ttcctggcct cctggagttc ttccaaagga gttttgtatg gtgaaagtgt 301 ggacaagaaa agaaatataa ttcttgagtc ttcagactca agacggccct ttctcagtat 361 catgaatgtg aagccagagg acagtgactt ctacttctgc gcgacggttg ggagccccaa 421 gatggtcttt gggacaggga cgaagctgac tgtggttgat gtccttccta caactgcccc 481 aaccaagaag actaccctga agatgaagaa gaagaagcaa tgcccgttcc cccacccaga 541 gacccagaag ggcctgacat gcagccttac caccctcagc ctgctggtag tctgcatcct 601 gcttctgctg gcattcctcg gagtggccgt ctacttttac tgtgtgcgga ggagagcccg 661 aattcacttc atgaaacagt ttcacaaatg atcagcgccc acaacactga tagcctgcta 721 gcaataaaag gactgtaact caatcaaagc aagatttgaa ctagtgagag acagcgcatt 781 caagactgga gaggcccttg cccttgctca agctgcctgc tttgaactgc tgcaagctct 841 gtgtgtggtc tggggtctca cagggaaggc cccagaaccc aagctcactc acagagtggc 901 tgaagaacca agaactccca caccaccatg tactcttctt ggactgggcc ttggacagtg 961 gccttccagc cactgtcttt gtcagttgct tggtatgaca gccttattga ctctttggcc 1021 tttcatggaa aagagctagc cgggaccctg gagaagactg caaatcctca cacagagaag 1081 ccacctcatg aataaagttt tctgcaaaca g //