LOCUS X00452 1116 bp mRNA linear HUM 18-APR-2005 DEFINITION Human mRNA for DC classII histocompatibility antigen alpha-chain. ACCESSION X00452 K01505 VERSION X00452.1 KEYWORDS histocompatibility antigen; signal peptide. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1116) AUTHORS Auffray C., Lillie J.W., Arnot D.E., Grossberger D., Kappes D.J., Strominger J.L. TITLE Isotypic and allotypic variation of human class II histocompatibility antigen alpha-chain genes JOURNAL Nature 308(5957), 327-333(1984). PUBMED 6584734 FEATURES Location/Qualifiers source 1..1116 /db_xref="H-InvDB:HIT000320864" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" CDS 23..790 /product="DC classII histocompatibility antigen alpha-chain" /db_xref="GOA:P01909" /db_xref="H-InvDB:HIT000320864.15" /db_xref="HGNC:HGNC:4942" /db_xref="InterPro:IPR001003" /db_xref="InterPro:IPR003006" /db_xref="InterPro:IPR003597" /db_xref="InterPro:IPR007110" /db_xref="InterPro:IPR011162" /db_xref="InterPro:IPR013783" /db_xref="InterPro:IPR014745" /db_xref="InterPro:IPR036179" /db_xref="PDB:1JK8" /db_xref="PDB:1NBN" /db_xref="PDB:1S9V" /db_xref="PDB:1UVQ" /db_xref="PDB:2NNA" /db_xref="PDB:4GG6" /db_xref="PDB:4OZF" /db_xref="PDB:4OZG" /db_xref="PDB:4OZH" /db_xref="PDB:4OZI" /db_xref="PDB:5KSA" /db_xref="PDB:5KSB" /db_xref="PDB:5KSU" /db_xref="PDB:5KSV" /db_xref="PDB:6MFF" /db_xref="PDB:6MFG" /db_xref="UniProtKB/Swiss-Prot:P01909" /protein_id="CAA25141.1" /translation="MILNKALLLGALALTTVMSPCGGEDIVADHVASCGVNLYQFYGP SGQYTHEFDGDEQFYVDLERKETAWRWPEFSKFGGFDPQGALRNMAVAKHNLNIMIKR YNSTAATNEVPEVTVFSKSPVTLGQPNTLICLVDNIFPPVVNITWLSNGQSVTEDVSE TSFLSKSDHSFFKISYLTFLPSADEIYDCKVEHWGLDQPLLKHWEPEIPAPMSELTET VVCALGLSVGLMGIVVGTVFIIQGLRSVGASRHQGPL" sig_peptide 23..91 /note="signal peptide" misc_feature 92..352 /note="alpha 1 domain" misc_feature 353..644 /note="alpha 2 domain" misc_feature 645..673 /note="(CP) connecting peptide" misc_feature 674..742 /note="(TM) transmembrane region" mat_peptide 743..787 /note="(CY) cytoplasmatic region" misc_feature 1100..1105 /note="polyadenylation signal" polyA_site 1116..1116 /note="polyadenylation site" BASE COUNT 252 a 301 c 258 g 305 t ORIGIN 1 ctgaggctgc cttgggaaga agatgatcct aaacaaagct ctgctgctgg gggccctcgc 61 tctgaccacc gtgatgagcc cctgtggagg tgaagacatt gtggctgacc acgttgcctc 121 ttgtggtgta aacttgtacc agttttacgg tccctctggc cagtacaccc atgaatttga 181 tggagatgag cagttctacg tggacctgga gaggaaggag actgcctggc ggtggcctga 241 gttcagcaaa tttggaggtt ttgacccgca gggtgcactg agaaacatgg ctgtggcaaa 301 acacaacttg aacatcatga ttaaacgcta caactctacc gctgctacca atgaggttcc 361 tgaggtcaca gtgttttcca agtctcccgt gacactgggt cagcccaaca ccctcatttg 421 tcttgtggac aacatctttc ctcctgtggt caacatcaca tggctgagca atgggcagtc 481 agtcacagaa gatgtttctg agaccagctt cctctccaag agtgatcatt ccttcttcaa 541 gatcagttac ctcaccttcc ttccctctgc tgatgagatt tatgactgca aggtggagca 601 ctggggcctg gaccagcctc ttctgaaaca ctgggagcct gagattccag cccctatgtc 661 agagctcaca gagactgtgg tctgtgccct ggggttgtct gtgggcctca tgggcattgt 721 ggtgggcact gtcttcatca tccaaggcct gcgttcagtt ggtgcttcca gacaccaagg 781 gccattgtga atcccatcct ggaagggaag gtgcatcgcc atctacagga gcagaagaat 841 ggacttgcta aatgacctag cactattctc tggcccggtt tatcatatcc cttttctcct 901 ccaaatattt ctcctctcac cttttctctg ggacttaagc tgctatatcc cctcagagct 961 cacaaatgcc tttacattct ttccctgacc tcctgatttt tttttctttt ctcaaatgtt 1021 acctacacag acatgcctgg ggtaagccac ccggctacct aattcctcag taacctccat 1081 ctaaaatctc caaggaagca ataaattcct tttatg //