LOCUS V00493 575 bp mRNA linear HUM 07-OCT-2008
DEFINITION Homo sapiens messenger mRNA for hemoglobin alpha chain.
ACCESSION V00493
VERSION V00493.1
KEYWORDS alpha-globin; HBA2 gene; hemoglobin alpha chain.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 575)
AUTHORS Wilson J.T., Wilson L.B., Reddy V.B., Cavallesco C., Ghosh P.K.,
Deriel J.K., Forget B.G., Weissman S.M.
TITLE Nucleotide sequence of the coding portion of human alpha globin
messenger RNA
JOURNAL J Biol Chem 255(7), 2807-2815(1980).
PUBMED 6244294
FEATURES Location/Qualifiers
source 1..575
/db_xref="H-InvDB:HIT000320799"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
modified_base 1..1
/mod_base=m7g
/note="capped by m7G-ppp"
CDS 38..466
/product="hemoglobin alpha chain"
/db_xref="GOA:P69905"
/db_xref="H-InvDB:HIT000320799.15"
/db_xref="HGNC:HGNC:4823"
/db_xref="HGNC:HGNC:4824"
/db_xref="InterPro:IPR000971"
/db_xref="InterPro:IPR002338"
/db_xref="InterPro:IPR002339"
/db_xref="InterPro:IPR009050"
/db_xref="InterPro:IPR012292"
/db_xref="PDB:1A00"
/db_xref="PDB:1A01"
/db_xref="PDB:1A0U"
/db_xref="PDB:1A0Z"
/db_xref="PDB:1A3N"
/db_xref="PDB:1A3O"
/db_xref="PDB:1A9W"
/db_xref="PDB:1ABW"
/db_xref="PDB:1ABY"
/db_xref="PDB:1AJ9"
/db_xref="PDB:1B86"
/db_xref="PDB:1BAB"
/db_xref="PDB:1BBB"
/db_xref="PDB:1BIJ"
/db_xref="PDB:1BUW"
/db_xref="PDB:1BZ0"
/db_xref="PDB:1BZ1"
/db_xref="PDB:1BZZ"
/db_xref="PDB:1C7B"
/db_xref="PDB:1C7C"
/db_xref="PDB:1C7D"
/db_xref="PDB:1CLS"
/db_xref="PDB:1CMY"
/db_xref="PDB:1COH"
/db_xref="PDB:1DKE"
/db_xref="PDB:1DXT"
/db_xref="PDB:1DXU"
/db_xref="PDB:1DXV"
/db_xref="PDB:1FDH"
/db_xref="PDB:1FN3"
/db_xref="PDB:1G9V"
/db_xref="PDB:1GBU"
/db_xref="PDB:1GBV"
/db_xref="PDB:1GLI"
/db_xref="PDB:1GZX"
/db_xref="PDB:1HAB"
/db_xref="PDB:1HAC"
/db_xref="PDB:1HBA"
/db_xref="PDB:1HBB"
/db_xref="PDB:1HBS"
/db_xref="PDB:1HCO"
/db_xref="PDB:1HDB"
/db_xref="PDB:1HGA"
/db_xref="PDB:1HGB"
/db_xref="PDB:1HGC"
/db_xref="PDB:1HHO"
/db_xref="PDB:1IRD"
/db_xref="PDB:1J3Y"
/db_xref="PDB:1J3Z"
/db_xref="PDB:1J40"
/db_xref="PDB:1J41"
/db_xref="PDB:1J7S"
/db_xref="PDB:1J7W"
/db_xref="PDB:1J7Y"
/db_xref="PDB:1JY7"
/db_xref="PDB:1K0Y"
/db_xref="PDB:1K1K"
/db_xref="PDB:1KD2"
/db_xref="PDB:1LFL"
/db_xref="PDB:1LFQ"
/db_xref="PDB:1LFT"
/db_xref="PDB:1LFV"
/db_xref="PDB:1LFY"
/db_xref="PDB:1LFZ"
/db_xref="PDB:1LJW"
/db_xref="PDB:1M9P"
/db_xref="PDB:1MKO"
/db_xref="PDB:1NEJ"
/db_xref="PDB:1NIH"
/db_xref="PDB:1NQP"
/db_xref="PDB:1O1I"
/db_xref="PDB:1O1J"
/db_xref="PDB:1O1K"
/db_xref="PDB:1O1L"
/db_xref="PDB:1O1M"
/db_xref="PDB:1O1N"
/db_xref="PDB:1O1O"
/db_xref="PDB:1O1P"
/db_xref="PDB:1QI8"
/db_xref="PDB:1QSH"
/db_xref="PDB:1QSI"
/db_xref="PDB:1QXD"
/db_xref="PDB:1QXE"
/db_xref="PDB:1R1X"
/db_xref="PDB:1R1Y"
/db_xref="PDB:1RPS"
/db_xref="PDB:1RQ3"
/db_xref="PDB:1RQ4"
/db_xref="PDB:1RQA"
/db_xref="PDB:1RVW"
/db_xref="PDB:1SDK"
/db_xref="PDB:1SDL"
/db_xref="PDB:1SHR"
/db_xref="PDB:1SI4"
/db_xref="PDB:1THB"
/db_xref="PDB:1UIW"
/db_xref="PDB:1VWT"
/db_xref="PDB:1XXT"
/db_xref="PDB:1XY0"
/db_xref="PDB:1XYE"
/db_xref="PDB:1XZ2"
/db_xref="PDB:1XZ4"
/db_xref="PDB:1XZ5"
/db_xref="PDB:1XZ7"
/db_xref="PDB:1XZU"
/db_xref="PDB:1XZV"
/db_xref="PDB:1Y01"
/db_xref="PDB:1Y09"
/db_xref="PDB:1Y0A"
/db_xref="PDB:1Y0C"
/db_xref="PDB:1Y0D"
/db_xref="PDB:1Y0T"
/db_xref="PDB:1Y0W"
/db_xref="PDB:1Y22"
/db_xref="PDB:1Y2Z"
/db_xref="PDB:1Y31"
/db_xref="PDB:1Y35"
/db_xref="PDB:1Y45"
/db_xref="PDB:1Y46"
/db_xref="PDB:1Y4B"
/db_xref="PDB:1Y4F"
/db_xref="PDB:1Y4G"
/db_xref="PDB:1Y4P"
/db_xref="PDB:1Y4Q"
/db_xref="PDB:1Y4R"
/db_xref="PDB:1Y4V"
/db_xref="PDB:1Y5F"
/db_xref="PDB:1Y5J"
/db_xref="PDB:1Y5K"
/db_xref="PDB:1Y7C"
/db_xref="PDB:1Y7D"
/db_xref="PDB:1Y7G"
/db_xref="PDB:1Y7Z"
/db_xref="PDB:1Y83"
/db_xref="PDB:1Y85"
/db_xref="PDB:1Y8W"
/db_xref="PDB:1YDZ"
/db_xref="PDB:1YE0"
/db_xref="PDB:1YE1"
/db_xref="PDB:1YE2"
/db_xref="PDB:1YEN"
/db_xref="PDB:1YEO"
/db_xref="PDB:1YEQ"
/db_xref="PDB:1YEU"
/db_xref="PDB:1YEV"
/db_xref="PDB:1YFF"
/db_xref="PDB:1YG5"
/db_xref="PDB:1YGD"
/db_xref="PDB:1YGF"
/db_xref="PDB:1YH9"
/db_xref="PDB:1YHE"
/db_xref="PDB:1YHR"
/db_xref="PDB:1YIE"
/db_xref="PDB:1YIH"
/db_xref="PDB:1YVQ"
/db_xref="PDB:1YVT"
/db_xref="PDB:1YZI"
/db_xref="PDB:1Z8U"
/db_xref="PDB:2D5Z"
/db_xref="PDB:2D60"
/db_xref="PDB:2DN1"
/db_xref="PDB:2DN2"
/db_xref="PDB:2DN3"
/db_xref="PDB:2DXM"
/db_xref="PDB:2H35"
/db_xref="PDB:2HBC"
/db_xref="PDB:2HBD"
/db_xref="PDB:2HBE"
/db_xref="PDB:2HBF"
/db_xref="PDB:2HBS"
/db_xref="PDB:2HCO"
/db_xref="PDB:2HHB"
/db_xref="PDB:2HHD"
/db_xref="PDB:2HHE"
/db_xref="PDB:2M6Z"
/db_xref="PDB:2W6V"
/db_xref="PDB:2W72"
/db_xref="PDB:2YRS"
/db_xref="PDB:3B75"
/db_xref="PDB:3D17"
/db_xref="PDB:3D7O"
/db_xref="PDB:3DUT"
/db_xref="PDB:3HHB"
/db_xref="PDB:3HXN"
/db_xref="PDB:3IA3"
/db_xref="PDB:3IC0"
/db_xref="PDB:3IC2"
/db_xref="PDB:3KMF"
/db_xref="PDB:3NL7"
/db_xref="PDB:3NMM"
/db_xref="PDB:3ODQ"
/db_xref="PDB:3ONZ"
/db_xref="PDB:3OO4"
/db_xref="PDB:3OO5"
/db_xref="PDB:3OVU"
/db_xref="PDB:3P5Q"
/db_xref="PDB:3QJB"
/db_xref="PDB:3QJC"
/db_xref="PDB:3QJD"
/db_xref="PDB:3QJE"
/db_xref="PDB:3R5I"
/db_xref="PDB:3S48"
/db_xref="PDB:3S65"
/db_xref="PDB:3S66"
/db_xref="PDB:3SZK"
/db_xref="PDB:3WCP"
/db_xref="PDB:3WHM"
/db_xref="PDB:4FC3"
/db_xref="PDB:4HHB"
/db_xref="PDB:4IJ2"
/db_xref="PDB:4L7Y"
/db_xref="PDB:4M4A"
/db_xref="PDB:4M4B"
/db_xref="PDB:4MQC"
/db_xref="PDB:4MQG"
/db_xref="PDB:4MQH"
/db_xref="PDB:4MQI"
/db_xref="PDB:4MQJ"
/db_xref="PDB:4MQK"
/db_xref="PDB:4N7N"
/db_xref="PDB:4N7O"
/db_xref="PDB:4N7P"
/db_xref="PDB:4N8T"
/db_xref="PDB:4NI0"
/db_xref="PDB:4NI1"
/db_xref="PDB:4ROL"
/db_xref="PDB:4ROM"
/db_xref="PDB:4WJG"
/db_xref="PDB:4X0L"
/db_xref="PDB:4XS0"
/db_xref="PDB:5E29"
/db_xref="PDB:5E6E"
/db_xref="PDB:5E83"
/db_xref="PDB:5EE4"
/db_xref="PDB:5HU6"
/db_xref="PDB:5HY8"
/db_xref="PDB:5JDO"
/db_xref="PDB:5KDQ"
/db_xref="PDB:5KSI"
/db_xref="PDB:5KSJ"
/db_xref="PDB:5NI1"
/db_xref="PDB:5SW7"
/db_xref="PDB:5U3I"
/db_xref="PDB:5UCU"
/db_xref="PDB:5UFJ"
/db_xref="PDB:5URC"
/db_xref="PDB:5VMM"
/db_xref="PDB:5WOG"
/db_xref="PDB:5WOH"
/db_xref="PDB:5X2R"
/db_xref="PDB:5X2S"
/db_xref="PDB:5X2T"
/db_xref="PDB:5X2U"
/db_xref="PDB:6BB5"
/db_xref="PDB:6BNR"
/db_xref="PDB:6BWP"
/db_xref="PDB:6BWU"
/db_xref="PDB:6DI4"
/db_xref="PDB:6HAL"
/db_xref="PDB:6HBW"
/db_xref="PDB:6NBC"
/db_xref="PDB:6NBD"
/db_xref="UniProtKB/Swiss-Prot:P69905"
/protein_id="CAA23752.1"
/translation="MVLSPADKTNVKAAWGKVGAHAGEYGAEALERMFLSFPTTKTYF
PHFDLSHGSAQVKGHGKKVADALTNAVAHVDDMPNALSALSDLHAHKLRVDPVNFKLL
SHCLLVTLAAHLPAEFTPAVHASLDKFLASVSTVLTSKYR"
polyA_site 575..575
BASE COUNT 101 a 211 c 158 g 105 t
ORIGIN
1 actcttctgg tccccacaga ctcagagaga acccaccatg gtgctgtctc ctgccgacaa
61 gaccaacgtc aaggccgcct ggggcaaggt tggcgcgcac gctggcgagt atggtgcgga
121 ggccctggag aggatgttcc tgtccttccc caccaccaag acctacttcc cgcacttcga
181 cctgagccac ggctctgccc aggttaaggg ccacggcaag aaggtggccg acgcgctgac
241 caacgccgtg gcgcacgtgg acgacatgcc caacgcgctg tccgccctga gcgacctgca
301 cgcgcacaag cttcgggtgg acccggtcaa cttcaagctc ctaagccact gcctgctggt
361 gaccctggcc gcccacctcc ccgccgagtt cacccctgcg gtgcacgcct ccctggacaa
421 gttcctggct tctgtgagca ccgtgctgac ctccaaatac cgttaagctg gagcctcggt
481 agcagttcct cctgccagat gggcctccca acgggccctc ctcccctcct tgcaccggcc
541 cttcctggtc tttgaataaa gtctgagtgg gcggc
//