LOCUS       HSU89867                1791 bp    mRNA    linear   HUM 12-NOV-1997
DEFINITION  Human nuclear matrix protein 55 (nmt55) mRNA, complete cds.
ACCESSION   U89867
VERSION     U89867.1
KEYWORDS    .
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1791)
  AUTHORS   Traish,A.M., Huang,Y.H., Ashba,J., Pronovost,M., Pavao,M.,
            McAneny,D.B. and Moreland,R.B.
  TITLE     Loss of expression of a 55 kDa nuclear protein (nmt55) in estrogen
            receptor-negative human breast cancer
  JOURNAL   Diagn. Mol. Pathol. 6 (4), 209-221 (1997)
   PUBMED   9360842
REFERENCE   2  (bases 1 to 1791)
  AUTHORS   Moreland,R.B. and Traish,A.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-FEB-1997) Boston University School of Medicine, Rm
            W607A, 700 Albany Street, Boston, MA 02118-2394, USA
FEATURES             Location/Qualifiers
     source          1..1791
                     /db_xref="H-InvDB:HIT000222143"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="X"
                     /map="Xq13"
                     /cell_line="MCF-7"
                     /tissue_type="breast tumor"
                     /clone_lib="made by Mark Sobel, M.D., NCI"
     gene            1..1791
                     /gene="nmt55"
     CDS             86..1501
                     /gene="nmt55"
                     /function="putative RNA splicing factor; associates with
                     PSF"
                     /note="lost in estrogen receptor negative breast tumors"
                     /codon_start=1
                     /product="nuclear matrix protein 55"
                     /protein_id="AAC51852.1"
                     /translation="MQSNKTFNLEKQNHTPRKHHQHHHQQQHHQQQQQQPPPPPIPAN
                     GQQASSQNEGLTIDLKNFRKPGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGE
                     VFIHKDKGFGFIRLETRTLAEIAKVELDNMPLRGKQLRVRFACHSASLTVRNLPQYVS
                     NELLEEAFSVFGQVERAVVIVDDRGRPSGKGIVEFSGKPAARKALDRCSEGSFLLTTF
                     PRPVTVEPMDQLDDEEGLPEKLVIKNQQFHKEREQPPRFAQPGSFEYEYAMRWKALIE
                     MEKQQQDQVDRNIKEAREKLEMEMEAARHEHQVMLMRQDLMRRQEELRRMEELHNQEV
                     QKRKQLELRQEEERRRREEEMRRQQEEMMRRQQEGFKGTFPDAREQEIRMGQMAMGGA
                     MGINNRGAMPPAPVPAGTPAPPGPATMMPDGTLGLTPPTTERFGQAATMEGIGAIGGT
                     PPAFNRAAPGAEFAPNKRRRY"
     misc_feature    312..770
                     /gene="nmt55"
                     /note="similar to RNA binding domains"
     misc_feature    945..1091
                     /gene="nmt55"
                     /note="similar to oct2 transcription factor
                     helix-turn-helix domains"
BASE COUNT          521 a          401 c          499 g          370 t
ORIGIN      
        1 agataccagt cggtagagga gaagtcgagg ttagagggaa ctgggaggca ctttgctgtc
       61 tgcaatcgaa gttgagggtg caaaaatgca gagtaataaa acttttaact tggagaagca
      121 aaaccatact ccaagaaagc atcatcaaca tcaccaccag cagcagcacc accagcagca
      181 acagcagcag ccgccaccac cgccaatacc tgcaaatggg caacaggcca gcagccaaaa
      241 tgaaggcttg actattgacc tgaagaattt tagaaaacca ggagagaaga ccttcaccca
      301 acgaagccgt ctttttgtgg gaaatcttcc tcccgacatc actgaggaag aaatgaggaa
      361 actatttgag aaatatggaa aggcaggcga agtcttcatt cataaggata aaggatttgg
      421 ctttatccgc ttggaaaccc gaaccctagc ggagattgcc aaagtggagc tggacaatat
      481 gccactccgt ggaaagcagc tgcgtgtgcg ctttgcctgc catagtgcat cccttacagt
      541 tcgaaacctt cctcagtatg tgtccaacga actgctggaa gaagcctttt ctgtgtttgg
      601 ccaggtagag agggctgtag tcattgtgga tgatcgagga aggccctcag gaaaaggcat
      661 tgttgagttc tcagggaagc cagctgctcg gaaagctctg gacagatgca gtgaaggctc
      721 cttcctgcta accacatttc ctcgtcctgt gactgtggag cccatggacc agttagatga
      781 tgaagaggga cttccagaga agctggttat aaaaaaccag caatttcaca aggaacgaga
      841 gcagccaccc agatttgcac agcctggctc ctttgagtat gaatatgcca tgcgctggaa
      901 ggcactcatt gagatggaga agcagcagca ggaccaagtg gaccgcaaca tcaaggaggc
      961 tcgtgagaag ctggagatgg agatggaagc tgcacgccat gagcaccagg tcatgctaat
     1021 gagacaggat ttgatgaggc gccaagaaga acttcggagg atggaagagc tgcacaacca
     1081 agaggtgcaa aaacgaaagc aactggagct caggcaggag gaagagcgca ggcgccgtga
     1141 agaagagatg cggcggcagc aagaagaaat gatgcggcga cagcaggaag gattcaaggg
     1201 aaccttccct gatgcgagag agcaggagat tcggatgggt cagatggcta tgggaggtgc
     1261 tatgggcata aacaacagag gtgccatgcc ccctgctcct gtgccagctg gtaccccagc
     1321 tcctccagga cctgccacta tgatgccgga tggaactttg ggattgaccc caccaacaac
     1381 tgaacgcttt ggtcaggctg ctacaatgga aggaattggg gcaattggtg gaactcctcc
     1441 tgcattcaac cgtgcagctc ctggagctga atttgcccca aacaaacgtc gccgatacta
     1501 ataagttgca gtgtctagtt tctcaaaacc cttaaaagaa ggaccctttt tggactagcc
     1561 agaattctac cctggaaaag tgttagggat tccttccaat agttagatct accctgcctg
     1621 tactactcta gggagtatgc tggaggcaga gggcaaggga ggggtggtat taaacaagtc
     1681 aattctgtgt ggtatattgt ttaatcagtt ctgtgtggtg cattcctgaa gtctctaatg
     1741 tgactgttgg aaagggcctg gggaaaccat ggcaaagtgg atccagttag a
//