LOCUS HSU87223 5293 bp mRNA linear HUM 04-MAR-1999
DEFINITION Homo sapiens contactin associated protein (Caspr) mRNA, complete
cds.
ACCESSION U87223
VERSION U87223.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 5293)
AUTHORS Peles,E., Nativ,M., Lustig,M., Grumet,M., Schilling,J.,
Martinez,R., Plowman,G.D. and Schlessinger,J.
TITLE Identification of a novel contactin-associated transmembrane
receptor with multiple domains implicated in protein-protein
interactions
JOURNAL EMBO J. 16 (5), 978-988 (1997)
PUBMED 9118959
REFERENCE 2 (bases 1 to 5293)
AUTHORS Peles,E.
TITLE Direct Submission
JOURNAL Submitted (24-JAN-1997) Research, SUGEN Inc., 515 Galveston Drive,
Redwood City, CA 94063, USA
FEATURES Location/Qualifiers
source 1..5293
/db_xref="H-InvDB:HIT000222017"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="17"
/map="17q21"
/cell_line="IMR-32"
/tissue_type="neuroblastoma"
gene 1..5293
/gene="Caspr"
CDS 218..4372
/gene="Caspr"
/note="neurexin-like protein"
/codon_start=1
/product="contactin associated protein"
/protein_id="AAB48481.1"
/translation="MMHLRLFCILLAAVSGAEGWGYYGCDEELVGPLYARSLGASSYY
SLLTAPRFARLHGISGWSPRIGDPNPWLQIDLMKKHRIRAVATQGSFNSWDWVTRYML
LYGDRVDSWTPFYQRGHNSTFFGNVNESAVVRHDLHFHFTARYIRIVPLAWNPRGKIG
LRLGLYGCPYKADILYFDGDDAISYRFPRGVSRSLWDVFAFSFKTEEKDGLLLHAEGA
QGDYVTLELEGAHLLLHMSLGSSPIQPRPGHTTVSAGGVLNDQHWHYVRVDRFGRDVN
FTLDGYVQRFILNGDFERLNLDTEMFIGGLVGAARKNLAYRHNFRGCIENVIFNRVNI
ADLAVRRHSRITFEGKVAFRCLDPVPHPINFGGPHNFVQVPGFPRRGRLAVSFRFRTW
DLTGLLLFSRLGDGLGHVELTLSEGQVNVSIAQSGRKKLQFAAGYRLNDGFWHEVNFV
AQENHAVISIDDVEGAEVRVSYPLLIRTGTSYFFGGCPKPASRWDCHSNQTAFHGCME
LLKVDGQLVNLTLVEGRRLGFYAEVLFDTCGITDRCSPNMCEHDGRCYQSWDDFICYC
ELTGYKGETCHTPLYKESCEAYRLSGKTSGNFTIDPDGSGPLKPFVVYCDIRENRAWT
VVRHDRLWTTRVTGSSMERPFLGAIQYWNASWEEVSALANASQHCEQWIEFSCYNSRL
LNTAGGYPYSFWIGRNEEQHFYWGGSQPGIQRCACGLDRSCVDPALYCNCDADQPQWR
TDKGLLTFVDHLPVTQVVIGDTNRSTSEAQFFLRPLRCYGDRNSWNTISFHTGAALRF
PPIRANHSLDVSFYFRTSAPSGVFLENMGGPYCQWRRPYVRVELNTSRDVVFAFDVGN
GDENLTVHSDDFEFNDDEWHLVRAEINVKQARLRVDHRPWVLRPMPLQTYIWMEYDQP
LYVGSAELKRRPFVGCLRAMRLNGVTLNLEGRANASEGTSPNCTGHCAHPRLPCFHGG
RCVERYSYYTCDCDLTAFDGPYCNHDIGGFFEPGTWMRYNLQSALRSAAREFSHMLSR
PVPGYEPGYIPGYDTPGYVPGYHGPGYRLPDYPRPGRPVPGYRGPVYNVTGEEVSFSF
STSSAPAVLLYVSSFVRDYMAVLIKDDGTLQLRYQLGTSPYVYQLTTRPVTDGQPHSI
NITRVYRNLFIQVDYFPLTEQKFSLLVDSQLDSPKALYLGRVMETGVIDPEIQRYNTP
GFSGCLSGVRFNNVAPLKTHFRTPRPMTAELAEALRVQGELSESNCGAMPRLVSEVPP
ELDPWYLPPDFPYYHDEGWVAILLGFLVAFLLLGLVGMLVLFYLQNHRYKGSYHTNEP
KAAHEYHPGSKPPLPTSGPAQVPTPTAAPNQAPASAPAPAPTPAPAPGPRDQNLPQIL
EESRSE"
BASE COUNT 1097 a 1576 c 1448 g 1172 t
ORIGIN
1 caagagcgga ggaccaggaa ccagagagag agagagagaa aagagagagg agagacagag
61 cgcttggggg cgaaaggaga gagggaggga agggtgggta aggaggagag agcggtctgc
121 tgcaaacccc aggaggagag cttggagccc aagccagaac tcgagcccta gccggagccg
181 ttcacaggga ggcggctgcc gggaccgtca gccctgcatg atgcatctcc ggctcttctg
241 catcctgctc gccgcggtct caggagccga gggctggggc tactacggct gcgacgagga
301 gctggtgggt cccctgtatg cacgctccct gggcgcctcc tcctactaca gtctccttac
361 tgcgccgcga ttcgccaggc tgcacggcat aagcgggtgg tcaccacgga ttggggatcc
421 gaatccctgg ctccagatag acttaatgaa gaagcaccgg atccgggccg tggccacaca
481 gggctccttt aattcttggg actgggtcac acgttacatg ctactctacg gcgaccgagt
541 ggacagctgg acaccgttct accagcgagg gcacaactcg accttctttg gtaacgtgaa
601 cgagtcggcg gtggtgcgcc atgacctgca cttccacttc actgcgcgct acatccgcat
661 cgtgcccctg gcctggaacc cacgcggcaa gatcggcctg aggctcggcc tctatggctg
721 cccatacaag gccgacatac tctatttcga cggcgacgat gccatctcct accgcttccc
781 gcgaggggtc agccgaagcc tgtgggacgt gttcgccttc agcttcaaga ccgaggagaa
841 ggacggtctt ctgctgcacg ccgagggcgc ccagggcgac tacgtgacgc tcgagctgga
901 gggggcacac ctgctgctgc acatgagcct gggcagcagc cctatccagc caagaccagg
961 tcacaccacc gtgagcgcag gcggagtcct caatgaccag cactggcact atgtgcgggt
1021 ggaccgattt ggccgcgatg taaatttcac cctggacggc tatgtgcagc gctttattct
1081 caatggagac ttcgagaggc tgaacctgga cactgagatg ttcatcggag gtctggtggg
1141 cgccgcgcgg aagaacctgg cctatcggca taacttccgc ggctgcatag aaaacgtaat
1201 cttcaaccgc gtcaacatcg cagacctggc cgtgcggcgc cattcccgga tcaccttcga
1261 gggtaaggtg gcttttcgtt gcctggaccc ggtaccgcac cctatcaact tcggaggccc
1321 tcacaacttc gttcaagtgc ccggtttccc acgccgtggc cgcctggcag tctcatttcg
1381 cttccgcacc tgggacctca ccgggcttct ccttttctcc cgtctggggg acgggctggg
1441 ccacgtggag ctgacgctca gcgaagggca ggtcaacgtg tccatcgcgc agagcggccg
1501 aaagaagctt cagttcgctg ctgggtaccg actgaatgac ggcttttggc acgaggtgaa
1561 ttttgtggca caggaaaacc atgcagttat cagcattgat gatgtggaag gggcagaggt
1621 cagggtctca tacccgttgc tgatccggac agggacctca tatttctttg ggggttgtcc
1681 caagccagcc agtcgatggg actgccactc caaccagacg gcattccatg gctgcatgga
1741 gctgctcaag gtggatggtc aactggtcaa cctgactctg gtggagggcc ggcggcttgg
1801 attctatgct gaggtcctct ttgatacatg tggcatcact gataggtgca gccctaacat
1861 gtgtgagcat gatggacgct gctaccagtc ttgggatgac ttcatttgct actgcgaact
1921 gacgggctac aagggagaga cctgccacac acctttgtat aaggaatcct gtgaggctta
1981 tcggctcagt gggaaaactt ctggaaactt caccattgat cctgatggca gtggccccct
2041 gaagccattt gtagtgtact gtgatatccg agagaaccga gcgtggacag ttgtgcggca
2101 tgacaggctg tggacaactc gagtgacagg ttccagcatg gagcggccat tcctgggggc
2161 tatccagtac tggaatgcat cctgggagga agtcagtgcc cttgccaatg cttcccagca
2221 ttgtgaacag tggatcgagt tctcctgcta caattcccgg ctgctcaaca ctgcaggagg
2281 ctacccctac agcttttgga ttggccgaaa tgaggagcag cacttctact ggggaggctc
2341 ccagcctggg atccagcgct gtgcctgtgg tctggaccgg agctgtgtgg accctgcctt
2401 gtactgcaac tgtgacgctg accagcccca gtggagaact gacaagggac tgctgacctt
2461 tgtggaccat ctgcctgtca ctcaggtagt gataggggat acgaaccgct ccacttctga
2521 ggcccagttc ttcctgaggc ctctgcgctg ctatggcgat cgaaattcct ggaacaccat
2581 ttccttccac accggggctg cactacgctt ccccccaatc cgtgccaacc acagcctgga
2641 tgtctccttc tacttcagga cctctgctcc ctcgggggtc ttcctagaga atatgggggg
2701 cccttactgc cagtggcgcc gaccttatgt gcgggtggaa ctcaacacat cccgggatgt
2761 ggtcttcgcc tttgatgtgg ggaatgggga tgagaacctc acagtacact cagacgactt
2821 tgagttcaat gatgacgagt ggcacctggt ccgggctgaa atcaacgtga agcaggcccg
2881 gctccgagtg gatcaccggc cctgggttct gcggcctatg ccactgcaga cctacatctg
2941 gatggagtat gaccagcccc tctatgtggg atctgcagag cttaagagac gcccctttgt
3001 gggttgcttg agggccatgc gtctgaacgg agtgactctg aacctggagg gccgtgccaa
3061 tgcctctgag ggtacctcac ccaactgcac aggccactgt gcccaccctc ggctcccctg
3121 tttccatgga ggccgctgcg tggagcgcta tagctactac acgtgtgact gtgacctcac
3181 ggcttttgat gggccatact gcaaccacga tattggtggt ttctttgagc cgggcacctg
3241 gatgcgctat aacctacagt cagcgctgcg ctctgcagcc agggagttct cccacatgct
3301 gagccggcca gtgccaggct atgagcctgg ctacatcccg ggctatgata ctccgggcta
3361 tgtgcctggc taccatggcc ccgggtaccg cctgcccgac tacccccggc ctggtcggcc
3421 tgtgcccggt taccgtgggc ctgtctacaa cgttacggga gaggaggtct ccttcagctt
3481 cagcaccagc tccgcccctg ctgtcctgct ctacgtcagt tcctttgttc gtgactacat
3541 ggctgtgctc atcaaggatg atgggaccct tcagctgcga tatcagctgg gcaccagtcc
3601 ctacgtgtac cagctaacca ctcgaccagt gaccgatggc cagccccata gcatcaatat
3661 cacccgtgtt taccggaacc tcttcatcca ggtggactac ttcccactga cagagcagaa
3721 gttctcgctg ttggtggaca gccagttgga ctcacccaag gccttgtatt tagggcgtgt
3781 gatggagaca ggagtcattg acccggagat ccagcgctac aacaccccag gtttctcagg
3841 ctgcctgtct ggtgttcgat tcaacaacgt ggctcccctc aagacccact tccgaacccc
3901 tcgacccatg actgctgagc tagctgaggc ccttcgagtt cagggagaac tgtccgaatc
3961 taattgcgga gctatgccac gtcttgtttc agaggtgcca cctgagcttg atccctggta
4021 tctgccccca gacttcccct actaccatga tgaaggatgg gttgccatac ttttaggctt
4081 tttggtggcc tttctgctgc tggggctggt gggaatgttg gtgctcttct atctgcaaaa
4141 tcatcgctat aagggctcct accataccaa tgagcccaag gctgcccacg agtaccatcc
4201 tggcagcaaa cctcccctac ccacttcagg ccctgcccag gtccccaccc ctacagcagc
4261 tcccaaccaa gctccagcct cagccccagc cccagcccca actccagccc cagcccctgg
4321 cccccgggat cagaacctac cccagatcct ggaggagtcc aggtctgaat gagtcagaag
4381 ggcttctggg accaattcca gctcctgaca ttcccccagt cctgcctctc ccccatccta
4441 tcagggacat ttggctcctc ttagctggct ctgctcatcc agaggatatt cccccatccc
4501 ccccccatca agtttggtgg gcagagctac agatgggacc caagggagtg gccgagcctc
4561 actgcctaaa ccaatgccct tctcatccct gtttccccag gctcctggct gtttatctgc
4621 cccaaaggag aagcctcatg gggttgacat aggtcctttc tgccatctct gttccagctg
4681 ctgtcaggga ttaacaacag agtgtagggg agattaactg cctcccttcc aatagacact
4741 atcagcaggg acagatgtgt gggagtgcag ggctgcagag ggtatggggg gaggaggctg
4801 ctaaacccta tcccccagcc tcccccctgc cctgaagatc ttccatttgc ttccactcag
4861 ctggaggctc aagagggctt gatggctgtc ccctgccccc ctccttttgt tttgtacaca
4921 gagaccaaga ggcctcagtt tagcacctta gtacctccgc tgcttcactt gctttagcca
4981 aagccataaa aaacctgcaa cgtagagaaa ataatgcaga taccctgact agccagccct
5041 ctactcctcc aaccttttcc aagatatgca atggcctttg tgcctgccca aaggcttcgc
5101 ccctccagtg catgaggaac cctctttcct ccgctcagag atgctgcttc atttacccag
5161 gaggtcatat tctttatata tattttttgt tgcaaagtgt ctctctagag aaactctata
5221 tattattcga atttttaaat tatttgttta tatataaaag aaaagctcaa ttggcaaaaa
5281 aaaaaaaaaa aaa
//