LOCUS HSU80776 2063 bp mRNA linear HUM 07-DEC-2006
DEFINITION Human EST clone NIB1543 mariner transposon Hsmar1 orf gene,
complete cds.
ACCESSION U80776
VERSION U80776.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2063)
AUTHORS Berry,R., Stevens,T.J., Walter,N.A., Wilcox,A.S., Rubano,T.,
Hopkins,J.A., Weber,J., Goold,R., Soares,M.B. and Sikela,J.M.
TITLE Gene-based sequence-tagged-sites (STSs) as the basis for a human
gene map
JOURNAL Nat. Genet. 10 (4), 415-423 (1995)
PUBMED 7670491
REFERENCE 2 (bases 1 to 2063)
AUTHORS Robertson,H.M. and Zumpano,K.L.
TITLE Molecular evolution of an ancient mariner transposon, Hsmar1, in
the human genome
JOURNAL Gene 205 (1-2), 203-217 (1997)
PUBMED 9461395
REFERENCE 3 (bases 1 to 2063)
AUTHORS Robertson,H.M. and Zumpano,K.L.
TITLE Direct Submission
JOURNAL Submitted (30-NOV-1996) Entomology, University of Illinois at
Urbana-Champaign, 505 S. Goodwin, Urbana, IL 61801, USA
REFERENCE 4 (bases 1 to 2063)
AUTHORS Robertson,H.M.
TITLE Direct Submission
JOURNAL Submitted (09-APR-1997) Entomology, University of Illinois at
Urbana-Champaign, 505 S. Goodwin, Urbana, IL 61801, USA
REMARK Sequence update by submitter
FEATURES Location/Qualifiers
source 1..2063
/db_xref="H-InvDB:HIT000221608"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/note="EST clone NIB1543 from T.J. Stevens and J.M.
Sikela"
CDS 24..2039
/note="orf; encodes putative chimeric protein with SET
domain in N-terminus with similarity to several other
human, Drosophila, nematode and yeast proteins"
/codon_start=1
/product="unknown"
/protein_id="AAC52012.1"
/translation="MAEFKEKPEAPTEQLDVACGQENLPVGAWPPGAAPAPFQYTPDH
VVGPGADIDPTQITFPGCICVKTPCLPGTCSCLRHGENYDDNSCLRDIGSGGKYAEPV
FECNVLCRCSDHCRNRVVQKGLQFHFQVFKTHKKGWGLRTLEFIPKGRFVCEYAGEVL
GFSEVQRRIHLQTKSDSNYIIAIREHVYNGQVMETFVDPTYIGNIGRFLNHSCEPNLL
MIPVRIDSMVPKLALFAAKDIVPEEELSYDYSGRYLNLTVSASKERLDHGKLRKPCYC
GAKSCTAFLPFDSSLYCPVEKSNISCGNEKEPSMCGSAPSVFPSCKRLTLETMKMMLD
KKQIRAIFLFEFKMGRKAAETTRNINNAFGPGTANERTVQWWFKKFCKGDESLEDEER
SGRPSEVDNDQLRAIIEADPLTTTREVAEELNVNHSTVVRHLKQIEKVKKLDKWVPHE
LTENQKNRRFEVSSSLILRNHNEPFLDRIVTCDEKWILYDNRRRSAQWLDQEEAPKHF
PKPILHPKKVMVTIWWSAAGLIHYSFLNPGETITSEKYAQEIDEMNQKLQRLQLALVN
RKGPILLHDNARPHVAQPTLQKLNELGYEVLPHPPYSPDLLPTNYHVFKHLNNFLQGK
RFHNQQDAENAFQEFVESQSTDFYATGINQLISRWQKCVDCNGSYFD"
mobile_element 1004..2063
/mobile_element_type="transposon:mariner Hsmar1"
BASE COUNT 607 a 466 c 468 g 522 t
ORIGIN
1 caaagacgac acggccttgt gggatggcgg agtttaagga gaagcctgag gccccgactg
61 agcagctgga tgtcgcgtgc ggccaggaaa acttgccggt gggcgcgtgg cccccggggg
121 ccgcgccggc gcccttccag tacactcctg atcatgtagt tggacctgga gcagacattg
181 atcccactca aataaccttt cccggatgca tttgtgtcaa aactccctgc ctccctggca
241 cttgctcctg tctccgccat ggagagaact atgatgataa ctcatgcctt agagatatag
301 gatctggagg aaagtatgca gagcctgttt ttgaatgcaa tgtcctgtgc cgatgcagtg
361 accactgcag aaacagagtg gtccagaaag gtctacagtt ccacttccaa gtgttcaaga
421 cgcataaaaa aggctgggga cttcgtacct tggaatttat accgaaagga aggtttgtct
481 gtgaatatgc tggtgaggtt ttaggattct ctgaagttca gagaagaatt cacttacaaa
541 caaaatccga ctccaattac attatagcca tcagggaaca tgtttataat gggcaggtaa
601 tggaaacatt tgttgaccct acttatatag gaaatattgg aagattcctt aatcattctt
661 gtgagccaaa ccttttgatg attcctgtcc gaattgactc aatggtacct aagttggcac
721 tttttgcagc caaagatatt gtgccagaag aagaactctc ttatgattat tcaggaagat
781 atcttaatct aacagtcagt gcctccaaag aaaggctaga tcatgggaaa ctaaggaaac
841 cttgttactg tggtgccaaa tcatgtactg ctttcctgcc ttttgacagt tctctgtact
901 gccccgtaga aaagtcgaac atcagttgtg gaaatgagaa ggaacccagc atgtgtggct
961 cagccccttc tgtgttcccc tcctgcaagc gattgaccct tgagactatg aaaatgatgt
1021 tagacaaaaa gcaaattcga gcaattttct tattcgagtt caaaatgggt cgtaaagcag
1081 cagaaacaac tcgcaacatc aacaatgcat ttggcccagg aactgctaac gaacgtacag
1141 tgcagtggtg gttcaagaag ttttgcaaag gagatgagag ccttgaagat gaggagcgta
1201 gtggccggcc atcagaagtt gacaacgacc agttgagagc aatcatcgaa gctgatcccc
1261 ttacaactac acgagaagtt gctgaagaac tcaatgtcaa ccattctacg gtcgttcggc
1321 atttgaagca aattgaaaag gtgaaaaagc tcgataagtg ggtgcctcat gagctgactg
1381 aaaatcaaaa aaatcgtcgt tttgaagtgt catcttctct tattctacgc aaccacaacg
1441 aaccatttct cgatcggatt gtgacgtgtg atgaaaagtg gattttatat gacaaccggc
1501 gacgatcagc tcagtggttg gatcaagaag aagctccaaa gcacttccca aagccaatct
1561 tgcacccaaa aaaggtcatg gtcactattt ggtggtctgc tgctggtctg atccactaca
1621 gctttctgaa tcccggtgaa accattacat ctgagaagta tgctcaggaa atcgatgaga
1681 tgaaccaaaa actgcaacgc ctgcagctgg cattggtcaa cagaaagggc ccaattcttc
1741 tccacgacaa tgcccgaccg catgttgcac aacccacact tcaaaagttg aatgaattgg
1801 gctatgaagt tttgcctcat ccaccgtatt cacctgacct cttgccaacc aactaccacg
1861 tctttaagca tctcaacaac tttttgcagg gaaaacgctt ccacaaccag caggatgcag
1921 aaaatgcttt ccaagagttc gtcgaatccc aaagcacgga tttttacgct acaggaataa
1981 accaacttat ttctcgttgg caaaaatgtg ttgattgtaa tggttcctat tttgattaat
2041 aaaaatgcgt tgagcctaaa aaa
//