LOCUS HSU72891 879 bp mRNA linear HUM 03-OCT-2001 DEFINITION Human apolipoprotein B mRNA editing enzyme complex-1 (apobec-1) mRNA, complete cds. ACCESSION U72891 VERSION U72891.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 879) AUTHORS Hirano,K., Min,J., Funahashi,T., Baunoch,D.A. and Davidson,N.O. TITLE Characterization of the human apobec-1 gene: expression in gastrointestinal tissues determined by alternative splicing with production of a novel truncated peptide JOURNAL J. Lipid Res. 38 (5), 847-859 (1997) PUBMED 9186903 REFERENCE 2 (bases 1 to 879) AUTHORS Hirano,K. and Davidson,N.O. TITLE Direct Submission JOURNAL Submitted (27-SEP-1996) Medicine, University of Chicago, 5841 S. Maryland Avenue, Chicago, IL 60637, USA FEATURES Location/Qualifiers source 1..879 /db_xref="H-InvDB:HIT000221199" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /chromosome="12" /cell_line="G292" /tissue_type="osteosarcoma" gene 1..879 /gene="apobec-1" CDS 23..733 /gene="apobec-1" /note="G292 polymorphism; RNA specific cytidine deaminase; apolipoprotein B mRNA editing enzyme catalytic polypeptide-1" /codon_start=1 /product="apolipoprotein B mRNA editing enzyme complex-1" /protein_id="AAD00185.1" /translation="MTSEKGPSTGDPTLRRRIEPWEFDVFYDPRELRKEACLLYEIKW GMSRKIWRSSGKNTTNHVEVNFIKKFTSERDFHPSMSCSITWFLSWSPCWECSQAIRE FLSRHPGVTLVIYVARLFWHMDQQNRQGLRDLVNSGVTIQIMRASEYYHCWRNFVNYP PGDEAHWPQYPPLWMMLYALELHCIILSLPPCLKISRRWQNHLTFFRLHLQNCHYQTI PPHILLATGLIHPSVAWR" variation 262 /gene="apobec-1" /note="represents wild type; this single nt difference results in a single amino acid difference of Ile instead of the polymorphic Met" /replace="c" BASE COUNT 253 a 205 c 191 g 230 t ORIGIN 1 tgaattcgtg ggacagagca ccatgacttc tgagaaaggt ccttcaaccg gtgaccccac 61 tctgaggaga agaatcgaac cctgggagtt tgacgtcttc tatgacccca gagaacttcg 121 taaagaggcc tgtctgctct acgaaatcaa gtggggcatg agccggaaga tctggcgaag 181 ctcaggcaaa aacaccacca atcacgtgga agttaatttt ataaaaaaat ttacgtcaga 241 aagagatttt cacccatcca tgagctgctc catcacctgg ttcttgtcct ggagtccctg 301 ctgggaatgc tcccaggcta ttagagagtt tctgagtcgg caccctggtg tgactctagt 361 gatctacgta gctcggcttt tttggcacat ggatcaacaa aatcggcaag gtctcaggga 421 ccttgttaac agtggagtaa ctattcagat tatgagagca tcagagtatt atcactgctg 481 gaggaatttt gtcaactacc cacctgggga tgaagctcac tggccacaat acccacctct 541 gtggatgatg ttgtacgcac tggagctgca ctgcataatt ctaagtcttc caccctgttt 601 aaagatttca agaagatggc aaaatcatct tacatttttc agacttcatc ttcaaaactg 661 ccattaccaa acgattccgc cacacatcct tttagctaca gggctgatac atccttctgt 721 ggcttggaga tgaataggat gattccgtgt gtgtactgat tcaagaacaa gcaatgatga 781 cccactaaag agtgaatgcc atttagaatc tagaaatgtt cacaaggtac cccaaaactc 841 tgtagcttaa accaacaata aatatgtatt acctctggc //