LOCUS       HSU72891                 879 bp    mRNA    linear   HUM 03-OCT-2001
DEFINITION  Human apolipoprotein B mRNA editing enzyme complex-1 (apobec-1)
            mRNA, complete cds.
ACCESSION   U72891
VERSION     U72891.1
KEYWORDS    .
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 879)
  AUTHORS   Hirano,K., Min,J., Funahashi,T., Baunoch,D.A. and Davidson,N.O.
  TITLE     Characterization of the human apobec-1 gene: expression in
            gastrointestinal tissues determined by alternative splicing with
            production of a novel truncated peptide
  JOURNAL   J. Lipid Res. 38 (5), 847-859 (1997)
   PUBMED   9186903
REFERENCE   2  (bases 1 to 879)
  AUTHORS   Hirano,K. and Davidson,N.O.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-SEP-1996) Medicine, University of Chicago, 5841 S.
            Maryland Avenue, Chicago, IL 60637, USA
FEATURES             Location/Qualifiers
     source          1..879
                     /db_xref="H-InvDB:HIT000221199"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="12"
                     /cell_line="G292"
                     /tissue_type="osteosarcoma"
     gene            1..879
                     /gene="apobec-1"
     CDS             23..733
                     /gene="apobec-1"
                     /note="G292 polymorphism; RNA specific cytidine deaminase;
                     apolipoprotein B mRNA editing enzyme catalytic
                     polypeptide-1"
                     /codon_start=1
                     /product="apolipoprotein B mRNA editing enzyme complex-1"
                     /protein_id="AAD00185.1"
                     /translation="MTSEKGPSTGDPTLRRRIEPWEFDVFYDPRELRKEACLLYEIKW
                     GMSRKIWRSSGKNTTNHVEVNFIKKFTSERDFHPSMSCSITWFLSWSPCWECSQAIRE
                     FLSRHPGVTLVIYVARLFWHMDQQNRQGLRDLVNSGVTIQIMRASEYYHCWRNFVNYP
                     PGDEAHWPQYPPLWMMLYALELHCIILSLPPCLKISRRWQNHLTFFRLHLQNCHYQTI
                     PPHILLATGLIHPSVAWR"
     variation       262
                     /gene="apobec-1"
                     /note="represents wild type; this single nt difference
                     results in a single amino acid difference of Ile instead
                     of the polymorphic Met"
                     /replace="c"
BASE COUNT          253 a          205 c          191 g          230 t
ORIGIN      
        1 tgaattcgtg ggacagagca ccatgacttc tgagaaaggt ccttcaaccg gtgaccccac
       61 tctgaggaga agaatcgaac cctgggagtt tgacgtcttc tatgacccca gagaacttcg
      121 taaagaggcc tgtctgctct acgaaatcaa gtggggcatg agccggaaga tctggcgaag
      181 ctcaggcaaa aacaccacca atcacgtgga agttaatttt ataaaaaaat ttacgtcaga
      241 aagagatttt cacccatcca tgagctgctc catcacctgg ttcttgtcct ggagtccctg
      301 ctgggaatgc tcccaggcta ttagagagtt tctgagtcgg caccctggtg tgactctagt
      361 gatctacgta gctcggcttt tttggcacat ggatcaacaa aatcggcaag gtctcaggga
      421 ccttgttaac agtggagtaa ctattcagat tatgagagca tcagagtatt atcactgctg
      481 gaggaatttt gtcaactacc cacctgggga tgaagctcac tggccacaat acccacctct
      541 gtggatgatg ttgtacgcac tggagctgca ctgcataatt ctaagtcttc caccctgttt
      601 aaagatttca agaagatggc aaaatcatct tacatttttc agacttcatc ttcaaaactg
      661 ccattaccaa acgattccgc cacacatcct tttagctaca gggctgatac atccttctgt
      721 ggcttggaga tgaataggat gattccgtgt gtgtactgat tcaagaacaa gcaatgatga
      781 cccactaaag agtgaatgcc atttagaatc tagaaatgtt cacaaggtac cccaaaactc
      841 tgtagcttaa accaacaata aatatgtatt acctctggc
//