LOCUS AH006741 4912 bp DNA linear ROD 01-AUG-2016 DEFINITION Mus musculus strain 129 alternatively spliced transcript; T cell costimulatory molecule (B7-2) gene, complete cds, alternatively spliced. ACCESSION AH006741 U39392 U39456 U39457 U39458 U39459 U39460 U39461 U39462 U39463 U39464 U39465 U39466 VERSION AH006741.2 KEYWORDS . SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 4912) AUTHORS Borriello,F., Oliveros,J., Freeman,G.J., Nadler,L.M. and Sharpe,A.H. TITLE Differential expression of alternate mB7-2 transcripts JOURNAL J. Immunol. 155 (12), 5490-5497 (1995) PUBMED 7499829 REFERENCE 2 (bases 1 to 4912) AUTHORS Borriello,F. and Sharpe,A.H. TITLE Direct Submission JOURNAL Submitted (24-OCT-1995) Frank Borriello, Pathology, Harvard, 221 Longwood Avenue LMRC-514, Boston, MA 02115, USA COMMENT On or before Aug 1, 2016 this sequence version replaced U39392.1, U39457.1, U39458.1, U39459.1, U39460.1, U39461.1, U39462.1, U39463.1, U39464.1, U39465.1, U39466.1, U39456.1, AH006741.1. FEATURES Location/Qualifiers source 1..4912 /organism="Mus musculus" /mol_type="genomic DNA" /strain="129" /db_xref="taxon:10090" /chromosome="16" gene 272..4852 /gene="B7-2" mRNA join(272..320,558..663,764..848,2048..2097,2317..2652, 2823..3119,3382..3502,3820..3913,4280..4320,4737..4852) /gene="B7-2" /note="B7-2v alternatively spliced transcript" CDS join(272..320,558..663,2048..2097,2317..2652,2823..3119, 3382..3502,3820..3913,4280..4296,4737) /gene="B7-2" /note="B7-2iii alternatively spliced transcript; T cell costimulatory molecule" /codon_start=1 /protein_id="AAC52332.1" /translation="MAKTIRRLSVAFLTLSDRGPHYKILLPLPHKGWTPGLTHNASLY CASIILKNTMGLAILIFVTVLLISDAVSVETQAYFNGTAYLPCPFTKAQNISLSELVV FWQDQQKLVLYEHYLGTEKLDSVNAKYLGRTSFDRNNWTLRLHNVQIKDMGSYDCFIQ KKPPTGSIILQQTLTELSVIANFSEPEIKLAQNVTGNSGINLTCTSKQGHPKPKKMYF LITNSTNEYGDNMQISQDNVTELFSISNSLSLSFPDGVWHMTVVCVLETESMKISSKP LNFTQEFPSPQTYWKEITASVTVALLLVMLLIIVCHKKPNQPSRPSNTASKLERDSNA DRETINLKELEPQIASAKPNAE" CDS join(272..320,558..663,2048..2097,2317..2652,2823..3119, 3382..3502,3820..3913,4280..4296,4737) /gene="B7-2" /note="B7-2iii alternatively spliced transcript; T cell costimulatory molecule" /codon_start=1 /protein_id="AAC52333.1" /translation="MAKTIRRLSVAFLTLSDRGPHYKILLPLPHKGWTPGLTHNASLY CASIILKNTMGLAILIFVTVLLISDAVSVETQAYFNGTAYLPCPFTKAQNISLSELVV FWQDQQKLVLYEHYLGTEKLDSVNAKYLGRTSFDRNNWTLRLHNVQIKDMGSYDCFIQ KKPPTGSIILQQTLTELSVIANFSEPEIKLAQNVTGNSGINLTCTSKQGHPKPKKMYF LITNSTNEYGDNMQISQDNVTELFSISNSLSLSFPDGVWHMTVVCVLETESMKISSKP LNFTQEFPSPQTYWKEITASVTVALLLVMLLIIVCHKKPNQPSRPSNTASKLERDSNA DRETINLKELEPQIASAKPNAE" exon 272..320 /gene="B7-2" /number=1 gap 458..557 /estimated_length=unknown exon 558..663 /gene="B7-2" /number=2 gap 664..763 /estimated_length=unknown exon 764..848 /gene="B7-2" /number=3 gap 849..948 /estimated_length=unknown mRNA join(1170..1183,2048..2097,2317..2652,2823..3119, 3382..3502,3820..3913,4280..4296,4737..4852) /gene="B7-2" /note="B7-2i alternatively spliced transcript" CDS join(1170..1183,2048..2097,2317..2652,2823..3119, 3382..3502,3820..3913,4280..4296,4737) /gene="B7-2" /note="B7-2i alternatively spliced transcript; T cell costimulatory molecule" /codon_start=1 /protein_id="AAC52334.1" /translation="MDPRCTMGLAILIFVTVLLISDAVSVETQAYFNGTAYLPCPFTK AQNISLSELVVFWQDQQKLVLYEHYLGTEKLDSVNAKYLGRTSFDRNNWTLRLHNVQI KDMGSYDCFIQKKPPTGSIILQQTLTELSVIANFSEPEIKLAQNVTGNSGINLTCTSK QGHPKPKKMYFLITNSTNEYGDNMQISQDNVTELFSISNSLSLSFPDGVWHMTVVCVL ETESMKISSKPLNFTQEFPSPQTYWKEITASVTVALLLVMLLIIVCHKKPNQPSRPSN TASKLERDSNADRETINLKELEPQIASAKPNAE" exon 1170..1183 /gene="B7-2" /number=4 gap 1285..1384 /estimated_length=unknown mRNA join(1745..1818,2048..2097,2317..2652,2823..3119, 3382..3502,3820..3913,4280..4320,4737..4852) /gene="B7-2" /note="B7-2iv alternatively spliced transcript" mRNA join(1745..1773,2048..2097,2317..2652,2823..3119, 3382..3502,3820..3913,4280..4296,4737..4852) /gene="B7-2" /note="B7-2ii alternatively spliced transcript" CDS join(1745..1773,2048..2097,2317..2652,2823..3119, 3382..3502,3820..3913,4280..4296,4737) /gene="B7-2" /note="B7-2ii alternatively spliced transcript; T cell costimulatory molecule" /codon_start=1 /protein_id="AAC52335.1" /translation="MYVIKTCATCTMGLAILIFVTVLLISDAVSVETQAYFNGTAYLP CPFTKAQNISLSELVVFWQDQQKLVLYEHYLGTEKLDSVNAKYLGRTSFDRNNWTLRL HNVQIKDMGSYDCFIQKKPPTGSIILQQTLTELSVIANFSEPEIKLAQNVTGNSGINL TCTSKQGHPKPKKMYFLITNSTNEYGDNMQISQDNVTELFSISNSLSLSFPDGVWHMT VVCVLETESMKISSKPLNFTQEFPSPQTYWKEITASVTVALLLVMLLIIVCHKKPNQP SRPSNTASKLERDSNADRETINLKELEPQIASAKPNAE" exon 1745..1818 /gene="B7-2" /number=5 gap 1841..1940 /estimated_length=unknown exon 2048..2097 /gene="B7-2" /number=6 CDS join(2052..2097,2317..2652,2823..3119,3382..3502, 3820..3913,4280..4296,4737) /gene="B7-2" /note="B7-2iv and B7-2v alternatively spliced transcript; T cell costimulatory molecule" /codon_start=1 /protein_id="AAC52336.1" /translation="MGLAILIFVTVLLISDAVSVETQAYFNGTAYLPCPFTKAQNISL SELVVFWQDQQKLVLYEHYLGTEKLDSVNAKYLGRTSFDRNNWTLRLHNVQIKDMGSY DCFIQKKPPTGSIILQQTLTELSVIANFSEPEIKLAQNVTGNSGINLTCTSKQGHPKP KKMYFLITNSTNEYGDNMQISQDNVTELFSISNSLSLSFPDGVWHMTVVCVLETESMK ISSKPLNFTQEFPSPQTYWKEITASVTVALLLVMLLIIVCHKKPNQPSRPSNTASKLE RDSNADRETINLKELEPQIASAKPNAE" gap 2154..2253 /estimated_length=unknown exon 2317..2652 /gene="B7-2" /number=7 gap 2674..2773 /estimated_length=unknown exon 2823..3119 /gene="B7-2" /number=8 gap 3192..3291 /estimated_length=unknown exon 3382..3502 /gene="B7-2" /number=9 gap 3593..3692 /estimated_length=unknown exon 3820..3913 /gene="B7-2" /number=10 gap 4055..4154 /estimated_length=unknown exon 4280..4320 /gene="B7-2" /number=11 gap 4564..4663 /estimated_length=unknown exon 4737..4852 /gene="B7-2" /number=12 3'UTR 4738..4852 /gene="B7-2" BASE COUNT 1041 a 830 c 866 g 1069 t ORIGIN 1 ttgataacct tcatctggta catttggctt ctagaaaaga aagaaaggaa aaaaattaaa 61 aaccacctgt atggtttctt catttggtgt ctggtcctcg gtttccacag ccctggtcag 121 caaatgcctg tgagagtggc gagtgagaga aaccgagcaa gaacatctga gagactcgag 181 agaaactgag aagagatgag gtcatctaag agaacaaaaa tgtttcacaa gggagaagga 241 gtcacggtgt ccaattctcc agaaaggtgt gatggccaaa actatccgga gactctcggt 301 ggcctttttg acactctcag gtgaacaagg ggaactggcc tcagaacgcc aagaacgggg 361 aggcagccca gaggatggac gccttcttag aaagtttgat gcaaaaataa cacctgacac 421 ctccatcaac tcccttctgc cttttaaaat gacacagnnn nnnnnnnnnn nnnnnnnnnn 481 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 541 nnnnnnnnnn nnnnnnnaca ggggacccca ttataagatc ctcctacctc tacctcacaa 601 gggctggact ccaggcctga cccacaatgc ctctctctac tgtgcctcga tcattttaaa 661 aaannnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 721 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnctccatg ctctgcataa 781 tggcaatggc acatatcaca tgggcctaca gaggtgatag aattttgtag agcgtcacac 841 agagaaagnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 901 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnaa ctcgaataat 961 ctccaaagca aagaaagggt taaagatatc ttcctcaagt ctaagaaaag agnaacaacc 1021 cttaagaaaa agtcaccacc agggtacaca gtcattgctg aggaagaaag aggagcaagc 1081 agacgcgtaa gagtggctcc tgtaggcagc acggacttga acaaccagac tcctgtagac 1141 gtgttccaga acttacggaa gcacccacga tggaccccag atggtgaccc tggtggttga 1201 ctttttctta agggttgttn ctcttttctt agacttgagg aagatatctt taaccctttc 1261 tttgctttgt agattattcg agttnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1321 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1381 nnnncctcag ggctttacac ttgctggctg accaagggnc acaggtctag tcattctcgt 1441 cagtggaaan tgcccaccta ccagcagaag ttatctggaa ccaagcacga cacagcccct 1501 gtctgtggtg tcagtctctc tagtcagttc ccnnttctgt atgtgagttc ttcagtcccc 1561 agattatttc tcctgtataa ggacgcccag gaggcctggg gagcggacaa ggctcctttt 1621 acttttcttc ttcttctatt ttttttacct tctatttttt tcttcatgtt cctgtgatct 1681 tcgggaatgc tgctgtgctt gtgtgtgtgg tccctgagcg ccgaggtgga gaggcactgg 1741 tgacatgtat gtcatcaaga catgtgcaac ctggtgagca cgggatacag gagctgcagc 1801 tggggcagat gtgcagaggt gggctgtcag ctggagaggg nnnnnnnnnn nnnnnnnnnn 1861 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1921 nnnnnnnnnn nnnnnnnnnn gggaaccgac acgaatttta aatactcttt ctagttcatg 1981 tttcagtgaa caattgtttt cagtctcact ttctaactaa gttttatctt gtctttttaa 2041 actccagcac catgggcttg gcaatcctta tctttgtgac agtcttgctg atctcaggta 2101 agaacccttt tctgtgtaaa gtcctggagt ccttctgctg tcattcagtg agtnnnnnnn 2161 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 2221 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnntcagagc aagggatctt cctcttcttg 2281 tctcctcttt cctaattctc agtttttcta ttttagatgc tgtttccgtg gagacgcaag 2341 cttatttcaa tgggactgca tatctgccgt gcccatttac aaaggctcaa aacataagcc 2401 tgagtgagct ggtagtattt tggcaggacc agcaaaagtt ggttctgtac gagcactatt 2461 tgggcacaga gaaacttgat agtgtgaatg ccaagtacct gggccgcacg agctttgaca 2521 ggaacaactg gactctacga cttcacaatg ttcagatcaa ggacatgggc tcgtatgatt 2581 gttttataca aaaaaagcca cccacaggat caattatcct ccaacagaca ttaacagaac 2641 tgtcagtgat cggtatgtgg tcagtgctgt gttnnnnnnn nnnnnnnnnn nnnnnnnnnn 2701 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 2761 nnnnnnnnnn nnnatcgaca tctacattta ggttgactga ttccatcttt attctcttcc 2821 agccaacttc agtgaacctg aaataaaact ggctcagaat gtaacaggaa attctggcat 2881 aaatttgacc tgcacgtcta agcaaggtca cccgaaacct aagaagatgt attttctgat 2941 aactaattca actaatgagt atggtgataa catgcagata tcacaagata atgtcacaga 3001 actgttcagt atctccaaca gcctctctct ttcattcccg gatggtgtgt ggcatatgac 3061 cgttgtgtgt gttctggaaa cggagtcaat gaagatttcc tccaaacctc tcaatttcag 3121 taagtctgct tcctaagtat ttatttcaca aggtgctata agcaaatctt ttatccaaat 3181 tatccaaggt tnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 3241 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn ntggaaagag 3301 ggaaggaagg aaggcaagtt gtaaatttga acctttcata agtgagtttc ttactaatgg 3361 aaaacttgtg gtcatttcta gctcaagagt ttccatctcc tcaaacgtat tggaaggaga 3421 ttacagcttc agttactgtg gccctcctcc ttgtgatgct gctcatcatt gtatgtcaca 3481 agaagccgaa tcagcctagc aggtgatgag tgtatttgtt ctgtctaaag atcaccataa 3541 aatgtgtttt aatgagcata tgagatgagg aggaggaggt agctccgtgt tannnnnnnn 3601 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 3661 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nncattgtta aatgtgtacg cacagagaag 3721 agaacaccaa tgacaggaag tgttctggaa gactctggga aaggctgcat cataaaagca 3781 ccaggatatt gttgagtgct ccctgtgttt tcatttcagg cccagcaaca cagcctctaa 3841 gttagagcgg gatagtaacg ctgacagaga gactatcaac ctgaaggaac ttgaacccca 3901 aattgcttca gcagtaagtt cattcaaaga gcaactcggc cttcggagag ctagctggcc 3961 ggcggtttcc tactttagcc tgtctgtgca accaacacat gatagtattg ggcagcacca 4021 tgtaaccctt ctaggcatca gcctggggtt gattnnnnnn nnnnnnnnnn nnnnnnnnnn 4081 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 4141 nnnnnnnnnn nnnnaaaaac ttcccagccc acacttgtaa tttctctctg agacccaaga 4201 gtctaatgcc tcatcctgtc ccctctttct ctgtccgagg gctttcctgg cttctgaagt 4261 tgttttcgat ctctttcaga aaccaaatgc agagtgaagg cagtgagagc ctgaggaaag 4321 gtgagttgtg actgcatctc tgttgaaaca ggtttgatct ccccagtgcc tgtaacttgc 4381 gcaggcttta actcctgaga cacagcaggg acttatgata aagctagccg ggatggggga 4441 gaaagcaagg gaaagcaggg aggaaagtag ccataaacag gtggcagtgt ccgctgcaca 4501 gtgcccaagg gcatgccgag tcagtcaagg tcaaggaata aaccgtatat agggttgaga 4561 tttnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 4621 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnncttgatt cttatctttg 4681 aaatctcacc caacctttct tctttgtttg tttgtttgtt tgtttgtttt tttcagagtt 4741 aaaaattgct ttgcctgaaa taagaagtgc agagtttctc agaattcaaa aatgttctca 4801 gctgattgga attctacagt tgaataatta aagaacaaaa tacacaacag tgtccatatt 4861 ttatcctgtt tcctttccaa gtttttgggc aatctcaatt gtgtccccta tg //