LOCUS HSU38847 5173 bp mRNA linear HUM 22-FEB-1996
DEFINITION Human TAR RNA loop binding protein (TRP-185) mRNA, complete cds.
ACCESSION U38847
VERSION U38847.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 5173)
AUTHORS Wu-Baer,F., Lane,W.S. and Gaynor,R.B.
TITLE The cellular factor TRP-185 regulates RNA polymerase II binding to
HIV-1 TAR RNA
JOURNAL EMBO J. 14 (23), 5995-6009 (1995)
PUBMED 8846792
REFERENCE 2 (bases 1 to 5173)
AUTHORS Wu-Baer,F. and Gaynor,R.B.
TITLE Direct Submission
JOURNAL Submitted (17-OCT-1995) Foon Wu-Baer, Internal Medicine, UT
Southwestern Medical Center, 5323 Harry Hines Blvd., Dallas, TX
75235-8594, USA
FEATURES Location/Qualifiers
source 1..5173
/db_xref="H-InvDB:HIT000219610"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
gene 1..5173
/gene="TRP-185"
CDS 1..4866
/gene="TRP-185"
/codon_start=1
/product="TAR RNA loop binding protein"
/protein_id="AAC50379.1"
/translation="MEWVLAEALLSQSRDPRALLGALCQGEASAERVETLRFLLQRLE
DEEARGSGGAGALPEAAREVAAGYLVPLLRSLRGRPAGGPDPSLQPRHRRRVLRAAGA
ALRSCVRLAGRPQLAAALAEEALRDLLAGWRAPGAEAAVEVLAAVGPCLRPREDGPLL
ERVAGTAVALALGGGGDGDEAGPAEDAAALVAGRLLPVLVQCGGAALRAVWGGLAAPG
ASLGSGRVEEKLLVLSALAEKLLPEPGGDRARGAREAGPDARRCWRFWRTVQAGLGQA
DALTRKRARYLLQRAVEVSAELGADCTCGPQEGNGPSLFWWSERKKDELLKFWENYIL
IMETLEGNQIHVIKPVLPKLNNLFEYAVSEENGCWLFHPSWHMCIYKRMFESENKILS
KEGVIHFLELYETKILPFSPEFSEFIIGPLMDALSESSLYSRSPGQPIGSCSPLGLKL
QKFLVTYISLLPEEIKSSFLLKFIRKMTSRHWCAVPILFLSKALANVPRHKALGIDGL
LALRDVIHCTMITHQILLRGAAQCYLLQTAMNLLDVEKVSLSDVSTFLMSLRQEESLG
RGTSLWTELCDWLRVNESYFKPSPTCSSIGLHKTSLNAYVKSIVQEYVKSSAWETGEN
CFMPDWFEAKLVSLMVLLAVDVEGMKTQYSGKQRTENVLRIFLDPLLDVLMKFSTNAY
MPLLKTDRCLQLLLKLLNTCRLKGSSAQDDEVSTVLQNFFMSTTESISEFILRRLTMN
ELNSVSDLDRCHLYLMVLTELINLHLKVGWKRGNPIWRVISLLKNASIQHLQEMDSGQ
EPTVGSQIQRVVSMAALAMVCEAIDQKPELQLDSLHAGPLESFLSSLQLNQTLQKPHA
EEQSSYAHPLECSSVLEESSSSQGWGKIVAQYIHDQWVCLSFLLKKYHTLIPTTGSEI
LEPFLPAVQMPIRTLQSALEALTVLSSDQVLPVFHCLKVLVPKLLTSSESLCIESFDM
AWKIISSLSNTQLIFWANLKAFVQFVFDNKVLTIAAKIKGQAYFKIKEIMYKIIEMSA
IKTGVFNTLISYCCQSWIVSASNVSQGSLSSAKNYSELILEACIFGTVFRRDQRLVQD
VQTFIENLGHDCAANIVMENTKREDHYVRICAVKFLCLLDGSNMSHKLFIEDLAIKLL
DKDELVSKSKKRYYVNSLQHRVKNRVWQTLLVLFPRLDQNFLNGIIDRIFQAGFTNNQ
ASIKYFIEWIIILILHKFPQFLPKFWDCFSYGEENLKTSICTFLAVLSHLDIITQNIP
EKKLILKQALIVVLQWCFNHNFSVRLYALVALKKLWTVCKVLSVEEFDALTPVIESSL
HQVESMHGAGNAKKNWQRIQEHFFFATFHPLKDYCLETIFYILPRLSGLIEDEWITID
KFTRFTDVPLAAGFQWYLSQTQLSKLKPGDWSQQDIGTNLVEADNQAEWTDVQKKIIP
WNSRVSDLDLELLFQDRAARLGKSISRLIVVASLIDKPTNLGGLCRTCEVFGASVLVV
GSLQCISDKQFQHLSVSAEQWLPLVEVKPPQLIDYLQQKKTEGYTIIGVEQTAKSLDL
TQYCFPEKSLLLLGNEREGIPANLIQQLDVCVEIPQQGIIRSLNVHVSGALLIWEYTR
QQLLSHGDTKP"
BASE COUNT 1348 a 1116 c 1309 g 1400 t
ORIGIN
1 atggagtggg tgctcgcgga agcgctgctc tcgcagagcc gggacccccg ggccctgctt
61 ggggcgctgt gccaagggga ggcatccgcg gagcgcgtgg agacgctgcg cttccttctg
121 cagcggctcg aggacgagga ggcgcgcggc agcgggggcg caggcgcgct cccggaggcg
181 gcgcgcgagg tggctgcagg gtacctcgtg ccactgctgc ggagcctgcg cggacgcccc
241 gcgggcggcc cggaccccag tctgcagcct cgccaccgcc ggcgcgtgct gagggcggcg
301 ggcgcggccc tgcgctcgtg cgtccgcctg gccgggcgtc cgcagctggc ggccgcgctg
361 gctgaggagg cgctgcgcga tctgctcgcc gggtggcgcg cgcctggcgc cgaggctgcc
421 gtggaagtgc tagcagccgt cgggccatgt ttgcggcccc gcgaggacgg gccgctactg
481 gagcgggtgg cggggaccgc cgtcgccctg gcgctgggcg ggggcgggga cggggatgag
541 gccgggcctg ccgaggacgc ggcggcgctg gtggccgggc gactgctgcc agtgctggtc
601 caatgtggcg gggcggcgct gcgggccgtg tggggcgggc tggccgcgcc tggggcgtcc
661 ctggggtccg gccgcgtaga ggagaagctg ctggtcctga gcgccctggc cgagaagctg
721 ttgcccgagc ccggcggcga ccgcgcccgc ggcgcgcgcg aggcgggccc ggacgcccgg
781 cgctgctggc gcttctggag gacggtgcag gcggggctgg gccaggcgga cgccctgacg
841 cgcaagcgag cgcgctacct gctgcagagg gcggtggagg tgtcggcgga gctgggggcc
901 gactgcacct gcgggcccca ggaaggaaac ggcccaagtc tgttttggtg gtctgagagg
961 aaaaaagatg agcttctaaa gttttgggaa aattatattt taattatgga gactttagaa
1021 ggaaatcaga tacatgttat aaagccagtt ttaccaaagc taaacaatct gtttgaatat
1081 gcggtgtcag aggaaaatgg atgttggctc tttcacccat cctggcatat gtgtatttat
1141 aaaagaatgt ttgaaagtga aaacaaaatc ctgtccaaag aaggtgttat ccattttttg
1201 gagctgtatg aaacaaagat tcttccattt tcaccagaat tttctgagtt tattattgga
1261 ccattaatgg atgcgctttc agagagctct ctgtatagca ggtccccagg ccagccaata
1321 ggaagctgtt ctccattggg actgaaatta cagaagtttt tagtcactta tatttctctt
1381 cttccagaag aaataaagag tagcttccta ttgaagttta ttcggaagat gacaagtagg
1441 cattggtgtg ctgttcccat tttgtttcta tctaaggctt tggcaaatgt cccaagacat
1501 aaggccctgg gtatagatgg gcttcttgct ctcagggatg ttattcattg cactatgatc
1561 acacatcaga ttctcctgag aggggcagcc caatgctacc ttcttcaaac agctatgaat
1621 ttgctagatg tggagaaagt gtcactttct gatgtctcaa cttttctcat gtctctgaga
1681 caagaggaat ccttaggacg aggaacttca ttgtggacag agctgtgtga ctggctacgt
1741 gttaatgaaa gctattttaa gccatcccct acgtgtagct ccattggact tcacaagaca
1801 tctttaaatg cttatgtaaa gagcattgtt caagagtatg ttaagtcatc tgcttgggaa
1861 acaggagaaa actgctttat gcctgattgg tttgaagcca agcttgtttc tctgatggtc
1921 ttgctggctg tggatgtgga aggaatgaag actcagtata gcggaaagca gagaacagag
1981 aatgtattgc ggatattctt agaccctctt ctggatgtgc ttatgaagtt tagtaccaat
2041 gcctacatgc ccttgctgaa gactgacaga tgcctccagc tgctgttgaa gctgttgaac
2101 acatgcaggt tgaaaggttc cagtgcccaa gatgatgagg tgtctactgt tcttcagaac
2161 tttttcatgt ctactacaga gagcatttct gaatttattc tcagaagact tactatgaat
2221 gagctaaata gtgtttcaga tctggatcgt tgccatttat acctgatggt gttaactgag
2281 cttataaatc tgcatttgaa ggttgggtgg aaaaggggta accctatctg gagagttatt
2341 tctcttttga aaaatgcatc cattcagcat cttcaagaga tggacagtgg acaggagcca
2401 acagttggaa gtcagattca gagagtagtg agcatggctg ccttggccat ggtgtgtgag
2461 gccatagacc agaagcctga gctgcagctg gactctctcc atgctgggcc cctggaaagc
2521 ttcctttcct ctcttcagct caatcagacg ctgcagaagc cccacgcaga ggagcagagc
2581 agttatgctc accccttgga gtgcagcagt gttttggaag aatcgtcatc ttcccaagga
2641 tggggaaaaa tagttgcaca atatattcat gatcaatggg tgtgcctctc tttcctgttg
2701 aaaaaatatc acacccttat accaaccaca gggagtgaaa ttctggaacc gtttctacct
2761 gccgttcaga tgccaataag gactttgcag tctgcactag aagccctcac agttctttct
2821 tctgatcaag ttttaccagt gttccattgc ttgaaagtgt tggttcccaa gcttctgact
2881 tcctctgaat cactctgcat agagtctttt gacatggcgt ggaaaattat atcttcttta
2941 agcaacactc agctgatatt ctgggctaat ttaaaagctt ttgttcagtt tgtttttgat
3001 aacaaagttc ttaccattgc tgccaaaatc aagggccagg catatttcaa aataaaagag
3061 attatgtaca agataattga aatgtctgct ataaagactg gagtcttcaa tacactgata
3121 agttactgct gtcagtcttg gatagtgtct gcttcaaatg tgtcccaagg atctttatca
3181 agtgctaaaa attatagcga acttatcctt gaggcttgta tatttggaac tgtgtttagg
3241 cgtgatcaaa gacttgttca ggatgtacag accttcatag aaaaccttgg acatgactgt
3301 gcggcaaata ttgttatgga aaatactaag agagaagacc attatgtgag aatttgtgct
3361 gtcaaattcc tgtgtttatt agatggctcc aatatgtccc acaagttgtt tattgaggat
3421 cttgcaatca agctattaga taaagatgaa ttagtgtcca agtccaaaaa acgctactat
3481 gtgaattctc tacagcacag agtgaaaaac cgagtctggc agactctgct ggtacttttc
3541 cctagacttg accagaattt cttgaatgga attattgaca ggattttcca ggctggtttc
3601 accaacaatc aagcatccat aaaatatttt atagaatgga ttattatatt gattcttcat
3661 aaattccctc aatttcttcc aaagttctgg gattgttttt cttatggtga agaaaatctt
3721 aaaacaagca tttgtacatt tttagcagtt ttatcacatt tagacattat tactcaaaat
3781 attccagaaa agaaactaat tctgaagcaa gcccttatag ttgtgctgca gtggtgtttc
3841 aatcacaatt ttagtgttcg actgtatgct ttagttgctc ttaagaaact ctggactgtg
3901 tgtaaagtgt taagtgttga agaatttgat gccctgactc ctgtgattga atccagcctc
3961 catcaagtgg aaagcatgca cggagcaggg aatgccaaga agaattggca acgcattcag
4021 gagcatttct tttttgcaac atttcaccca ctcaaggatt attgtctaga gaccatattt
4081 tacatccttc cacgcctttc aggccttatt gaagatgaat ggatcaccat tgataaattt
4141 accagattca ctgatgttcc tttagctgcg ggatttcagt ggtacctttc tcaaactcaa
4201 cttagtaaac taaaaccagg tgactggtct cagcaagaca taggtactaa tttggttgaa
4261 gcagataacc aagcagagtg gaccgacgtt cagaagaaga ttatcccgtg gaacagtcgt
4321 gtttccgact tagacctgga gctcctgttt caggatcgtg ctgccagact tggaaagtca
4381 attagtagac tcatcgttgt ggcctcgctc atcgacaaac cgaccaattt aggaggactg
4441 tgcaggacct gtgaggtatt tggggcttca gtgctcgttg ttggcagcct tcagtgtatc
4501 agcgacaaac agtttcagca cctcagtgtc tctgcagaac agtggcttcc tctagtggag
4561 gtaaaaccac ctcagctaat tgattatctg cagcagaaga aaacagaagg ttataccatc
4621 attggagtgg aacaaactgc caaaagttta gacctaaccc aatattgctt tcctgagaaa
4681 tctctgctct tgttgggaaa tgaacgtgag ggaattccag caaatctgat ccaacagttg
4741 gacgtttgtg tggaaattcc tcaacagggc attatccgct ccctgaatgt ccatgtgagt
4801 ggagccctgc tgatctggga gtacaccagg cagcagctgc tctcgcacgg agataccaag
4861 ccatgatgtg ccttccttag tgaactgctg ctgctgttca gactttttta aaaaaaacta
4921 tttggactaa agaaacagat tctgaaattt attgtgataa tttgtatttc ttttttcttg
4981 caatttaatg ccaaaagttt gccatgtgcc ttaaacatat tactatatat tttccccttt
5041 aataaacact ttttgttaaa ttgtattctt cctttaataa aatattttaa gcaattgtcc
5101 aataaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
5161 aaaaaaaaaa aaa
//