LOCUS HSU37251 2397 bp mRNA linear HUM 11-AUG-2003 DEFINITION Homo sapiens KRAB zinc finger protein (ZNF177) mRNA, complete cds; alternatively spliced. ACCESSION U37251 VERSION U37251.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2397) AUTHORS Baban,S., Freeman,J.D. and Mager,D.L. TITLE Transcripts from a novel human KRAB zinc finger gene contain spliced Alu and endogenous retroviral segments JOURNAL Genomics 33 (3), 463-472 (1996) PUBMED 8661005 REFERENCE 2 (bases 1 to 2397) AUTHORS Landry,J.R., Medstrand,P. and Mager,D.L. TITLE Repetitive elements in the 5' untranslated region of a human zinc-finger gene modulate transcription and translation efficiency JOURNAL Genomics 76 (1-3), 110-116 (2001) PUBMED 11549323 REFERENCE 3 (bases 1 to 2397) AUTHORS Baban,S., Freeman,J.D. and Mager,D.L. TITLE Direct Submission JOURNAL Submitted (28-SEP-1995) Dixie L. Mager, Terry Fox Laboratory, B.C. Cancer Agency, 601 West 10th Avenue, Vancouver, B.C. V5Z1L3, Canada FEATURES Location/Qualifiers source 1..2397 /db_xref="H-InvDB:HIT000219509" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="SB2" /clone_lib="NTera2D1 cDNA library" gene 1..2397 /gene="ZNF177" 5'UTR <1..447 /gene="ZNF177" repeat_region complement(57..143) /note="similar to HERV-H endogenous retrovirus env gene" repeat_region complement(287..360) /note="similar to Alu repeat" CDS 448..810 /gene="ZNF177" /note="alternatively spliced variant contains stop codon and frame shift between the KRAB box and the zinc finger region" /codon_start=1 /product="KRAB zinc finger protein" /protein_id="AAB09748.1" /translation="MAAGWLTTWSQNSVTFQEVAVDFSQEEWGLLDPAQKNLYKDVML ENFRNLASVGYQLCRHSLISKVDQEQLKTDERGILQGDCADWETQLKPKDTIAMQNIP GGKTSNGINMNPHGREFL" misc_feature 478..672 /gene="ZNF177" /note="Region: KRAB domain" misc_feature 1361..1948 /gene="ZNF177" /note="encodes zinc finger motifs in longer coding region alternatively spliced variant" BASE COUNT 739 a 494 c 532 g 632 t ORIGIN 1 gaccttcgct tggtgtcctc ctggcctcag caacctgaca attctgtcgt gtcccgggct 61 gggtataagt aagcaagaag agggcctggg agaagagtct gacgagcaag gggaaggtag 121 ccaaggatgg agtgaaatac agggtgacct gtgtttttcc cctggctcct ttggaaatta 181 tgggaaaaaa tcaaatacca aggaagaaaa atctataatg aaattagatg tggatttctt 241 tttatgtatt cagcttgggg gcttatgata cttctagtac ccaaagagat gcggtcttgc 301 tgtgttgcct aggctggtct caaactcctg ctctcaagtg atcctcctgc ctcagcctcc 361 tgagtacatt tatatttaaa gtaattattg atggctctgc ctgcttagga ctctgcccag 421 ccaggaagga aacctacagg aggaagaatg gctgcagggt ggctgacaac ctggtcacag 481 aactcagtaa ccttccagga agtggcagtg gacttttccc aggaggagtg gggattgctg 541 gaccctgctc aaaaaaatct atacaaagat gtgatgctgg agaactttag gaacctggcc 601 tcagtagggt atcagctctg cagacacagt ctgatctcca aggtggatca agaacagctg 661 aagacagatg aaagaggaat tttacaaggt gactgtgcag actgggaaac tcaacttaaa 721 ccaaaagata caattgctat gcagaacatt cctgggggaa aaacatccaa tggcataaac 781 atgaatcctc atggaagaga attcctgtga ataaggtgaa agtgaaaaag cctctagtca 841 ccacttactc ccttttcaac aggcagaaaa tcaacctggt gagcactccc tggagtgtaa 901 ccattgtggg aaattcagaa agaacactcg ctttatttgt acaagatatt gcaagggaga 961 gaaatgctat aaatatataa agtatagcaa agtcttcaac catccctcaa ctcttaggag 1021 tcatgtgagc attcacattg gagagaaaac tcttgaattt actgattgta gaaaagcttt 1081 caatcaagag tcatccctca ggaaacactt aagaactccc acaggacaga agtttcagga 1141 gtatgagcaa tgtgatatgt ccttcagcct acactcttcc tgctcagtac gtgagcaaat 1201 acctactgga gagaaaggtg atgaatgcag tgactatggc aaaatatctc cccttagtgt 1261 ccacacaaaa actggtagtg tggaggaggg tttggaatgt aatgaacatg agaaaacttt 1321 cactgaccct ttgtcccttc agaactgtgt cagaactcac tctggagaga tgccctatga 1381 atgcagtgac tgtgggaaag ccttcatttt tcagtcttcc cttaagaaac acatgagatc 1441 tcatactgga gagaagcctt atgagtgtga tcactgtgga aaatccttta gccagagctc 1501 tcatctgaat gtgcacaaaa gaactcacac tggagagaaa ccctatgact gtaaggaatg 1561 tgggaaggct ttcactgttc cttcatccct tcagaaacat gtgagaaccc acactggaga 1621 gaaaccctat gaatgcagtg actgtggaaa agccttcatt gatcagtcat cccttaagaa 1681 acacacacgc tctcacactg gagagaagcc ttatgagtgt aaccagtgtg gaaagtcctt 1741 cagcacaggc tcttacctta ttgtgcacaa gagaactcac actggtgaga aaacctatga 1801 gtgtaaagaa tgtgggaagg cctttaggaa ttcctcttgc ctgagggtac acgtgagaac 1861 tcacactgga gagaagcctt ataaatgttt tcagtgtgaa aaagccttta gcacaagcac 1921 taaccttata atgcacaagc gaatccacaa tggccagaaa ctccatgaat gaaatgactc 1981 agggaagtgt ttgttgcccc tcatgcctcc tttctcactt tagaacatat attggagaga 2041 agccctgtta tggtcacctg gaaacagcct tctggcccaa ctctggatgc ctgttatact 2101 gggacaaacc ttataaatgt tatagctatg attgttttta tcagtgagta tttcattctt 2161 atatgtgtca caactgtaga tcctatgaat attttagtta tcttttcagt ttaattgcat 2221 tgtgaacaga acacatggtc ttcaatatgt agattctgtg tgacatagat ttgaacataa 2281 ttgctggaca ctgactgatg tactgtggca gacagaacta gttgctgtct caatatccat 2341 tcctcccttc tttcttaaag taataaaatt taccatttag ttcaaaaaaa aaaaaaa //