LOCUS HSU23731 1245 bp mRNA linear HUM 18-JUL-1995 DEFINITION Human TAR DNA-binding protein-43 mRNA, complete cds. ACCESSION U23731 VERSION U23731.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1245) AUTHORS Ou,S.H., Wu,F., Harrich,D., Garcia-Martinez,L.F. and Gaynor,R.B. TITLE Cloning and characterization of a novel cellular protein, TDP-43, that binds to human immunodeficiency virus type 1 TAR DNA sequence motifs JOURNAL J. Virol. 69 (6), 3584-3596 (1995) PUBMED 7745706 REFERENCE 2 (bases 1 to 1245) AUTHORS Ou,S.-H.I. TITLE Direct Submission JOURNAL Submitted (27-MAR-1995) S.-H.I. Ou, Internal Medicine, University of Texas Southwestern, 5323 Harry Hines Blvd., Dallas, TX 75209, USA FEATURES Location/Qualifiers source 1..1245 /db_xref="H-InvDB:HIT000218701" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /cell_line="HeLa cells" CDS 1..1245 /note="TDP-43 binds to HIV-1 LTR TAR DNA region and can repress HIV-1 transcription; TDP-43" /codon_start=1 /product="TAR DNA-binding protein-43" /protein_id="AAA70033.1" /translation="MSEYIRVTEDENDEPIEIPSEDDGTVLLSTVTAQFPGACGLRYR NPVSQCMRGVRLVEGILHAPDAGWGNLVYVVNYPKDNKRKMDETDASSAVKVKRAVQK TSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVK VMSQRHMIDGRWCDCKLPNSKQSQDEPLRSRKVFVGRCTEDMTEDELREFFSQYGDVM DVFIPKPFRAFAFVTFADDQIAQSLCGEDLIIKGISVHISNAEPKHNSNRQLERSGRF GGNPGGFGNQGGFGNSRGGGAGLGNNQGSNMGGGMNFGAFSINPAMMAAAQAALQSSW GMMGMLASQQNQSGPSGNNQNQGNMQREPNQAFGSGNNSYSGSNSGAAIGWGSASNAG SGSGFNGGFGSSMDSKSSGWGM" BASE COUNT 352 a 227 c 359 g 307 t ORIGIN 1 atgtctgaat atattcgggt aaccgaagat gagaacgatg agcccattga aataccatcg 61 gaagacgatg ggacggtgct gctctccacg gttacagccc agtttccagg ggcgtgtggg 121 cttcgctaca ggaatccagt gtctcagtgt atgagaggtg tccggctggt agaaggaatt 181 ctgcatgccc cagatgctgg ctggggaaat ctggtgtatg ttgtcaacta tccaaaagat 241 aacaaaagaa aaatggatga gacagatgct tcatcagcag tgaaagtgaa aagagcagtc 301 cagaaaacat ccgatttaat agtgttgggt ctcccatgga aaacaaccga acaggacctg 361 aaagagtatt ttagtacctt tggagaagtt cttatggtgc aggtcaagaa agatcttaag 421 actggtcatt caaaggggtt tggctttgtt cgttttacgg aatatgaaac acaagtgaaa 481 gtaatgtcac agcgacatat gatagatgga cgatggtgtg actgcaaact tcctaattct 541 aagcaaagcc aagatgagcc tttgagaagc agaaaagtgt ttgtggggcg ctgtacagag 601 gacatgactg aggatgagct gcgggagttc ttctctcagt acggggatgt gatggatgtc 661 ttcatcccca agccattcag ggcctttgcc tttgttacat ttgcagatga tcagattgcg 721 cagtctcttt gtggagagga cttgatcatt aaaggaatca gcgttcatat atccaatgcc 781 gaacctaagc acaatagcaa tagacagtta gaaagaagtg gaagatttgg tggtaatcca 841 ggtggctttg ggaatcaggg tggatttggt aatagcagag ggggtggagc tggtttggga 901 aacaatcaag gtagtaatat gggtggtggg atgaactttg gtgcgttcag cattaatcca 961 gccatgatgg ctgccgccca ggcagcacta cagagcagtt ggggtatgat gggcatgtta 1021 gccagccagc agaaccagtc aggcccatcg ggtaataacc aaaaccaagg caacatgcag 1081 agggagccaa accaggcctt cggttctgga aataactctt atagtggctc taattctggt 1141 gcagcaattg gttggggatc agcatccaat gcagggtcgg gcagtggttt taatggaggc 1201 tttggctcaa gcatggattc taagtcttct ggctggggaa tgtag //