LOCUS HSU18299 4193 bp mRNA linear HUM 20-JAN-1996 DEFINITION Human damage-specific DNA binding protein DDBa p127 subunit (DDB1) mRNA, complete cds. ACCESSION U18299 VERSION U18299.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 4193) AUTHORS Dualan,R., Brody,T., Keeney,S., Nichols,A.F., Admon,A. and Linn,S. TITLE Chromosomal localization and cDNA cloning of the genes (DDB1 and DDB2) for the p127 and p48 subunits of a human damage-specific DNA binding protein JOURNAL Genomics 29 (1), 62-69 (1995) PUBMED 8530102 REFERENCE 2 (bases 1 to 4193) AUTHORS Nichols,A.F. and Linn,S. TITLE Direct Submission JOURNAL Submitted (08-DEC-1994) Stuart Linn, University of California, Berkeley, 401 Barker Hall, Berkeley, CA 94720-3202, USA FEATURES Location/Qualifiers source 1..4193 /db_xref="H-InvDB:HIT000218448" /organism="Homo sapiens" /mol_type="mRNA" /isolate="skin fibroblast CRL 1262; lung fibroblast IMR-90" /db_xref="taxon:9606" /chromosome="11" /map="11q12-11q13.2" /cell_line="IMR-90" /cell_type="fibroblast" /tissue_type="epidermal; fetal lung" /dev_stage="fetal" /note="same sequence in both tissues" gene 1..4193 /gene="DDB1" CDS 101..3523 /gene="DDB1" /experiment="experimental evidence, no additional details recorded" /note="damage-specific DNA binding protein p127 subunit; implicated in Xeroderma pigmentosum group E" /codon_start=1 /product="DDBa p127" /protein_id="AAC50349.1" /translation="MSYNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVV TAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIIT RAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLE ELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASM VIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDM EGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRLGDSQLV KLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRN GIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEVEETELMG FVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQAKNISVASCNSSQV VVAVGRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISA RILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLS DRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPL NSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRI EVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHT FEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDG KLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELRTECNHYNNIMALYL KTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAF NLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLF GTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGF IDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKVVEELTRIH" regulatory 4184..4189 /regulatory_class="polyA_signal_sequence" /gene="DDB1" BASE COUNT 979 a 1057 c 1127 g 1030 t ORIGIN 1 gtggagttcg ctgcggctgt tgggggccac ctgtcttttc gcttgtgccc ctctttctag 61 tgtcgcgctc gagtcccgac gggccgctcc aagcctcgac atgtcgtaca actacgtggt 121 aacggcccag aagcccaccg ccgtgaacgg ctgcgtgacc ggacacttta cttcggccga 181 agacttaaac ctgttgattg ccaaaaacac gagattagag atctatgtgg tcaccgccga 241 ggggcttcgg cccgtcaaag aggtgggcat gtatgggaag attgcggtca tggagctttt 301 caggcccaag ggggagagca aggacctgct gtttatcttg acagcgaagt acaatgcctg 361 catcctggag tataaacaga gtggcgagag cattgacatc attacgcgag cccatggcaa 421 tgtccaggac cgcattggcc gcccctcaga gaccggcatt attggcatca ttgaccctga 481 gtgccggatg attggcctgc gtctctatga tggccttttc aaggttattc cactagatcg 541 cgataataaa gaactcaagg ccttcaacat ccgcctggag gagctgcatg tcattgatgt 601 caagttccta tatggttgcc aagcacctac tatttgcttt gtctaccagg accctcaggg 661 gcggcacgta aaaacctatg aggtgtctct ccgagaaaag gaattcaata agggcccttg 721 gaaacaggaa aatgtcgaag ctgaagcttc catggtgatc gcagtcccag agccctttgg 781 gggggccatc atcattggac aggagtcaat cacctatcac aatggtgaca aatacctggc 841 tattgcccct cctatcatca agcaaagcac gattgtgtgc cacaatcgag tggaccctaa 901 tggctcaaga tacctgctgg gagacatgga aggccggctc ttcatgctgc ttttggagaa 961 ggaggaacag atggatggca ccgtcactct caaggatctc cgtgtagaac tccttggaga 1021 gacctctatt gctgagtgct tgacatacct tgataatggt gttgtgtttg tcgggtctcg 1081 cctgggtgac tcccagcttg tgaagctcaa cgttgacagt aatgaacaag gctcctatgt 1141 agtggccatg gaaaccttta ccaacttagg acccattgtc gatatgtgcg tggtggacct 1201 ggagaggcag gggcaggggc agctggtcac ttgctctggg gctttcaagg aaggttcttt 1261 gcggatcatc cggaatggaa ttggaatcca cgagcatgcc agcattgact taccaggcat 1321 caaaggatta tggccactgc ggtctgaccc taatcgtgag actgatgaca ctttggtgct 1381 ctcttttgtg ggccagacaa gagttctcat gttaaatgga gaggaggtag aagaaaccga 1441 actgatgggt ttcgtggatg atcagcagac tttcttctgt ggcaacgtgg ctcatcagca 1501 gcttatccag atcacttcag catcggtgag gttggtctct caagaaccca aagctctggt 1561 cagtgaatgg aaggagcctc aggccaagaa catcagtgtg gcctcctgca atagcagcca 1621 ggtggtggtg gctgtaggca gggccctcta ctatctgcag atccatcctc aggagctccg 1681 gcagatcagc cacacagaga tggaacatga agtggcttgc ttggacatca ccccattagg 1741 agacagcaat ggactgtccc ctctttgtgc cattggcctc tggacggaca tctcggctcg 1801 tatcttgaag ttgccctctt ttgaactact gcacaaggag atgctgggtg gagagatcat 1861 tcctcgctcc atcctgatga ccacctttga gagtagccat tacctccttt gtgccttggg 1921 agatggagcg cttttctact ttgggctcaa cattgagaca ggtctgttga gcgaccgtaa 1981 gaaggtgact ttgggcaccc agcccaccgt attgaggact tttcgttctc tttctaccac 2041 caacgtcttt gcttgttctg accgccccac tgtcatctat agcagcaacc acaaattggt 2101 cttctcaaat gtcaacctca aggaagtgaa ctacatgtgt cccctcaatt cagatggcta 2161 tcctgacagc ctggcgctgg ccaacaatag caccctcacc attggcacca tcgatgagat 2221 ccagaagctg cacattcgca cagttcccct ctatgagtct ccaaggaaga tctgctacca 2281 ggaagtgtcc cagtgtttcg gggtcctctc cagccgcatt gaagtccaag acacgagtgg 2341 gggcacgaca gccttgaggc ccagcgctag cacccaggct ctgtccagca gtgtaagctc 2401 cagcaagctg ttctccagca gcactgctcc tcatgagacc tcctttggag aagaggtgga 2461 ggtgcacaac ctacttatca ttgaccaaca cacctttgaa gtgcttcatg cccaccagtt 2521 tctgcagaat gaatatgccc tcagtctggt ttcctgcaag ctgggcaaag accccaacac 2581 ttacttcatt gtgggcacag caatggtgta tcctgaagag gcagagccca agcagggtcg 2641 cattgtggtc tttcagtatt cggatggaaa actacagact gtggctgaaa aggaagtgaa 2701 aggggccgtg tactctatgg tggaatttaa cgggaagctg ttagccagca tcaatagcac 2761 ggtgcggctc tatgagtgga caacagagaa ggagctgcgc actgagtgca accactacaa 2821 caacatcatg gccctctacc tgaagaccaa gggcgacttc atcctggtgg gcgaccttat 2881 gcgctcagtg ctgctgcttg cctacaagcc catggaagga aactttgaag agattgctcg 2941 agactttaat cccaactgga tgagtgctgt ggaaatcttg gatgatgaca attttctggg 3001 ggctgaaaat gcctttaact tgtttgtgtg tcaaaaggat agcgctgcca ccactgacga 3061 ggagcggcag cacctccagg aggttggtct tttccacctg ggcgagtttg tcaatgtctt 3121 ttgccacggc tctctggtaa tgcagaatct gggtgagact tccaccccca cacaaggctc 3181 ggtgctcttc ggcacggtca acggcatgat agggctggtg acctcactgt cagagagctg 3241 gtacaacctc ctgctggaca tgcagaatcg actcaataaa gtcatcaaaa gtgtggggaa 3301 gatcgagcac tccttctgga gatcctttca caccgagcgg aagacagaac cagccacagg 3361 tttcatcgac ggtgacttga ttgagagttt cctggatatt agccgcccca agatgcagga 3421 ggtggtggca aacctacagt atgacgatgg cagcggtatg aagcgagagg ccactgcaga 3481 cgacctcatc aaggttgtgg aggagctaac tcggatccat tagccaaggg cagggggccc 3541 cctttctgac cctccccaaa ggctttgccc tgctgccctc cccctcctct ccaccatcgt 3601 cttcttggcc atgggaggcc tttccctaag ccagctgccc ccagagccac agttccccta 3661 tgtggaagtg gggcgggctt catagagact tgggaatgag ctgaaggtga aacattttct 3721 ccctggattt ttaccagtct cacatgattc cagccatcac cttagaccac caagccttga 3781 ttggtgttgc cagttgtcct ccttccgggg aaggattttg cagttctttg gctgaaagga 3841 agctgtgcgt gtgtgtgtgt gtatgtgtgt gtgtgtatgt gtatctcaca ctcatgcaat 3901 gtcctctttt tatttagatt ggcagtgtag ggagttgtgg gtagtgggga agagggttag 3961 gagggtttca ttgtctgtga agtgagacct tccttttact tttcttctat tgcctctgag 4021 agcatcagcc tagaggcctg actgccaagc catgggtagc ctgggtgtaa aacctggaga 4081 tggtggatga tccccacgcc acagcccttt tgtctctgca aactgccttc ttcggaaaga 4141 agaaggtggg aggatgtgaa ttgttagttt ctgagtttta ccaaataaag tag //