LOCUS HSU18009 2381 bp mRNA linear HUM 04-APR-1996
DEFINITION Human chromosome 17q21 mRNA clone LF113.
ACCESSION U18009
VERSION U18009.1
KEYWORDS BRCA1.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2381)
AUTHORS Friedman,L.S., Ostermeyer,E.A., Lynch,E.D., Szabo,C.I.,
Anderson,L.A., Dowd,P., Lee,M.K., Rowell,S.E., Boyd,J. and
King,M.C.
TITLE The search for BRCA1
JOURNAL Cancer Res. 54 (24), 6374-6382 (1994)
PUBMED 7987831
REFERENCE 2 (bases 1 to 2381)
AUTHORS Friedman,L.S., Ostermeyer,E.A., Lynch,E.D., Szabo,C.I., Meza,J.E.,
Anderson,L.A., Dowd,P., Lee,M.K., Rowell,S.E., Ellison,J., Boyd,J.
and King,M.C.
TITLE 22 genes from chromosome 17q21: cloning, sequencing, and
characterization of mutations in breast cancer families and tumors
JOURNAL Genomics 25 (1), 256-263 (1995)
PUBMED 7774926
REFERENCE 3 (bases 1 to 2381)
AUTHORS Friedman,L.S.
TITLE Direct Submission
JOURNAL Submitted (01-DEC-1994) Lori S. Friedman, Molecular and Cell
Biology, University of California at Berkeley, Berkeley, CA 94720,
USA
FEATURES Location/Qualifiers
source 1..2381
/db_xref="H-InvDB:HIT000218431"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="17"
/map="17q21"
/clone="LF113"
/clone_lib="fibroblast cDNA"
CDS <1..940
/note="similar to Pacific ray VAT1 protein, Swiss-Prot
Accession Number P19333"
/codon_start=2
/protein_id="AAA95990.1"
/translation="NSARGGLNFADLMARQGLYDRLPPLPVTPGMEGAGVVIAVGEGV
SDRKAGDRVMVLNRSGMWQEEVTVPSVQTFLIPEAMTFEEAAALLVNYITAYMVLFDF
GNLQPGHSVLVHMAAGGVGMAAVHVCRTVENVTVFGTASASKHEALKENGVTHPIDYH
TTDYVDEIKKISPKGVDIVMDPLGGSDTAKGYNLLKPMGKVVTYGMANLLTGPKRNLM
ALARTWWNQFSVTALQLLQANRAVCGFHLGYLDGEVELVSGVVARLLALYNQGHIKPH
IDSVWPFEKVADAMKQMQEKKNVGKVLLVPGPEKES"
polyA_site 2381
/note="50 A nucleotides"
BASE COUNT 480 a 672 c 682 g 547 t
ORIGIN
1 gaattcggca cgaggcgggc tcaacttcgc agacctcatg gctaggcagg ggctgtacga
61 ccgtctcccg cctctgcctg tcactccggg catggagggc gcgggtgttg tgatcgcagt
121 gggcgaggga gtcagcgacc gcaaggcagg agaccgggtg atggtgttga accggtcagg
181 gatgtggcag gaagaggtga ctgtgccctc ggtccagacc ttcctgattc ctgaggccat
241 gacctttgag gaagctgctg ccttgctcgt caattacatt acagcctaca tggtcctctt
301 tgacttcggc aacctacagc ctggccacag cgtcttggta cacatggctg cagggggtgt
361 gggtatggct gccgtgcacg tgtgccgtac agtggagaat gtgacagtgt tcggaacggc
421 ctcggccagc aagcacgagg cactgaagga gaatggggtc acacatccca tcgactatca
481 cacgactgac tacgtggatg agatcaagaa gatttcccct aaaggagtgg acattgtcat
541 ggaccctctg ggtgggtcag atactgccaa gggctacaac ctcctgaaac ccatgggcaa
601 agtcgtcacc tatggaatgg ccaacctgct gacgggcccc aaacggaacc tgatggccct
661 ggcccggaca tggtggaatc agttcagcgt gacagctctg cagctgctgc aggccaaccg
721 ggctgtgtgt ggcttccacc tgggctacct ggatggtgag gtggagctgg tcagtggtgt
781 ggtggcccgc ctcctggctc tgtacaacca gggccacatc aagccccaca ttgactcagt
841 ctggcccttc gagaaggtgg ctgatgccat gaaacagatg caggagaaga agaatgtggg
901 caaggtcctc ctggttccag ggccagagaa ggagagctag ggcaagtggc tgtgagaccc
961 tagagaccag cgaagggaga agttgggaag ctacgttctg ttggccacca gacttgcatt
1021 tcagcctctg tcataatgct ctgccctccc tcccccgaag gtctctgtgg tgatgaccgc
1081 tcttccctgc ccctccccgc ttcctgacct ctgaagaggt tgggaagtga ccatttggat
1141 gtctgggccc tgccaaggcg acagggaggg tcagagggag gccggctgct tcctgccccc
1201 accctttccc cgggcctgct gtgctgcttt tgtgccaagg ttagccagtc ccccctgttg
1261 tgttccatgt gctttcacct ctgcctcatc tttcctcccg tccctgcccc gccacctccc
1321 caaagaattg aagacgtcag ctcaggatat ggggccatct ctgtgagtca gcatgtacct
1381 gtctctccta gtgtccttca gcctgggctg accagtgccg cctctgggct tgaccagttc
1441 caatctgtct gtccaacttc ttaagcacaa ttgggcttct tcatctccag gttttctgcc
1501 attcttaacc aaggctgcct cttccaacag ggcgggaatc agacctactc ccctaggtca
1561 caactctggg aaggatacag agcccccacc cttcactgag ttctctggat ttgttctcag
1621 tgccttagca acgaaaacct gtgcttgtgt gtgtgtggcg gcggggaggg aggatcctgt
1681 ttcccacctc cttctcctcc cctgtactcc ccagtgcctt ccttgttctg gtggagctgg
1741 ggtttctctc ctccccagtc cacaacactg ccaaaatctg tgtatgtggc cattgggtgg
1801 ggcagcccca agcctcctgg ggaggcaggg caaaaacagg tgccctcatc gtggtctgtg
1861 ccatgtcccg tctctatggt ggttgaggag aaaggcgggg aagcttcctc agccttgcag
1921 atatgtgtgg catttactag ccagagctcc gaaaggcagt gctgtctgtt tcttgtactg
1981 ggaccaaagt aaaaatccaa gcacatcccc ttgcacttag gggaggccct actgcctctc
2041 tcaaagcaga gaggcagctt atcaaacctc agcccaaaac tctgtttaca tgggtgggga
2101 gatggagcag ggaactacag agtgggatgg tcaggacctg ggccattgca accaaaatgg
2161 ggacttcctg ggtagggagg tcactccctc tactcactag ctaggattag ggagggttat
2221 tgccccacca ttgcaatggg aggtggaggg acaggctcag cctcctcatt gtctaaatga
2281 ggcctaaatg tgtgaagtgc gatttctgct tttgtgtacc ccaccacccc attaccacag
2341 ctgcctttgt gtgtttgggt caataaaaag ccaaaccctg a
//