LOCUS HSU04845 5732 bp mRNA linear HUM 10-OCT-2001
DEFINITION Homo sapiens A type IV collagen (COL4A6) mRNA, complete cds.
ACCESSION U04845
VERSION U04845.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1658)
AUTHORS Zhou,J., Ding,M., Zhao,Z. and Reeders,S.T.
TITLE Complete primary structure of the sixth chain of human basement
membrane collagen, alpha 6(IV). Isolation of the cDNAs for alpha
6(IV) and comparison with five other type IV collagen chains
JOURNAL J. Biol. Chem. 269 (18), 13193-13199 (1994)
PUBMED 8175748
REFERENCE 2 (bases 1 to 5732)
AUTHORS Zhou,J.
TITLE Direct Submission
JOURNAL Submitted (05-JAN-1994) Jing Zhou, Dept. of Medicine, Renal
Division, Brigham and Women's Hospital, Harvard Medical School, 75
Francis St, Boston, MA 02115, USA
FEATURES Location/Qualifiers
source 1..5732
/db_xref="H-InvDB:HIT000217570"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
gene 1..5732
/gene="COL4A6"
CDS 110..5185
/gene="COL4A6"
/function="structural protein"
/experiment="experimental evidence, no additional details
recorded"
/codon_start=1
/product="A type IV collagen"
/protein_id="AAA19569.2"
/translation="MLINKLWLLLVTLCLTEELAAAGEKSYGKPCGGQDCSGSCQCFP
EKGARGRPGPIGIQGPTGPQGFTGSTGLSGLKGERGFPGLLGPYGPKGDKGPMGVPGF
LGINGIPGHPGQPGPRGPPGLDGCNGTQGAVGFPGPDGYPGLLGPPGLPGQKGSKGDP
VLAPGSFKGIKGDPGLPGLDGITGPQGAPGFPGAVGPAGPPGLQGPPGPPGPLGPDGN
MGLGFQGEKGVKGDVGLPGPAGPPPSTGELEFMGFPKGKKGSKGEPGPKGFPGISGPP
GFPGLGTTGEKGEKGEKGIPGLPGPRGPMGSEGVQGPPGQQGKKGTLGFPGLNGFQGI
EGQKGDIGLPGPDVFIDIDGAVISGNPGDPGVPGLPGLKGDEGIQGLRGPSGVPGLPA
LSGVPGALGPQGFPGLKGDQGNPGRTTIGAAGLPGRDGLPGPPGPPGPPSPEFETETL
HNKESGFPGLRGEQGPKGNLGLKGIKGDSGFCACDGGVPNTGPPGEPGPPGPWGLIGL
PGLKGARGDRGSGGAQGPAGAPGLVGPLGPSGPKGKKGEPILSTIQGMPGDRGDSGSQ
GFRGVIGEPGKDGVPGLPGLPGLPGDGGQGFPGEKGLPGLPGEKGHPGPPGLPGNGLP
GLPGPRGLPGDKGKDGLPGQQGLPGSKGITLPCIIPGSYGPSGFPGTPGFPGPKGSRG
LPGTPGQPGSSGSKGEPGSPGLVHLPELPGFPGPRGEKGLPGFPGLPGKDGLPGMIGS
PGLPGSKGATGDIFGAENGAPGEQGLQGLTGHKGFLGDSGLPGLKGVHGKPGLLGPKG
ERGSPGTPGQVGQPGTPGSSGPYGIKGKSGLPGAPGFPGISGHPGKKGTRGKKGPPGS
IVKKGLPGLKGLPGNPGLVGLKGSPGSPGVAGLPALSGPKGEKGSVGFVGFPGIPGLP
GIPGTRGLKGIPGSTGKMGPSGRAGTPGEKGDRGNPGPVGIPSPRRPMSNLWLKGDKG
SQGSAGSNGFPGPRGDKGEAGRPGPPGLPGAPGLPGIIKGVSGKPGPPGFMGIRGLPG
LKGSSGITGFPGMPGESGSQGIRGSPGLPGASGLPGLKGDNGQTVEISGSPGPKGQPG
ESGFKGTKGRDGLIGNIGFPGNKGEDGKVGVSGDVGLPGAPGFPGVAGMRGEPGLPGS
SGHQGAIGPLGSPGLIGPKGFPGFPGLHGLNGLPGTKGTHGTPGPSITGVPGPAGLPG
PKGEKGYPGIGIGAPGKPGLRGQKGDRGFPGLQGPAGLPGAPGISLPSLIAGQPGDPG
RPGLDGERGRPGPAGPPGPPGPSSNQGDTGDPGFPGIPGPKGPKGDQGIPGFSGLPGE
LGLKGMRGEPGFMGTPGKVGPPGDPGFPGMKGKAGPRGSSGLQGDPGQTPTAEAVQVP
PGPLGLPGIDGIPGLTGDPGAQGPVGLQGSKGLPGIPGKDGPSGLPGPPGALGDPGLP
GLQGPPGFEGAPGQQGPFGMPGMPGQSMRVGYTLVKHSQSEQVPPCPIGMSQLWVGYS
LLFVEGQEKAHNQDLGFAGSCLPRFSTMPFIYCNINEVCHYARRNDKSYWLSTTAPIP
MMPVSQTQIPQYISRCSVCEAPSQAIAVHSQDITIPQCPLGWRSLWIGYSFLMHTAAG
AEGGGQSLVSPGSCLEDFRATPFIECSGARGTCHYFANKYSFWLTTVEERQQFGELPV
SETLKAGQLHTRVSRCQVCMKSL"
BASE COUNT 1338 a 1519 c 1696 g 1179 t
ORIGIN
1 aattccggtc cctgggctgc tggtcttctt taccttccag ctgctcacag aacagagagt
61 ttctacatac aagcagaaga tgtgaaaata ttgggaataa ataaagtata tgcttataaa
121 caagttgtgg ctgctcctgg ttacgttgtg cctgaccgag gaactggcag cagcgggaga
181 gaagtcttat ggaaagccat gtgggggcca ggactgcagt gggagctgtc agtgttttcc
241 tgagaaagga gcgagaggac gacctggacc aattggaatt caaggcccaa caggtcctca
301 aggattcact ggctctactg gtttatcggg attgaaagga gaaaggggtt tcccaggcct
361 tctgggacct tatggaccaa aaggagataa gggtcccatg ggagttcctg gctttcttgg
421 catcaatggg attccgggcc accctggaca accaggcccc agaggcccac ctggtctgga
481 tggctgtaat ggaactcaag gagctgttgg atttccaggc cctgatggct atcctgggct
541 tctcggacca cccgggcttc ctggtcagaa aggatcaaaa ggtgaccctg tccttgctcc
601 aggtagtttc aaaggaatta agggggatcc tgggctgcct ggactggatg gaatcactgg
661 cccacaagga gcacccggat ttcctggagc tgtaggacct gcaggaccac caggattaca
721 aggtcctcca gggcctcctg gtcctcttgg tcctgatggg aatatggggc taggttttca
781 aggagagaaa ggagtcaagg gggatgttgg cctccctggc ccagcaggac ctccaccatc
841 tactggagag ctggaattca tgggattccc caaagggaag aaaggatcca agggtgaacc
901 agggcctaag ggttttccag gcataagtgg ccctccaggc ttcccgggcc ttggaactac
961 tggagaaaag ggagaaaagg gagaaaaggg aatccctggt ttgccaggac ctaggggtcc
1021 catgggttca gaaggagtcc aaggccctcc agggcaacag ggcaagaaag ggaccctggg
1081 atttcctggg cttaatggat tccaaggaat tgagggtcaa aagggtgaca ttggcctgcc
1141 aggcccagat gttttcatcg atatagatgg tgctgtgatc tcaggtaatc ctggagatcc
1201 tggtgtacct ggcctcccag gccttaaagg agatgaaggc atccaaggcc tacgtggccc
1261 ttctggtgtc cctggattgc cagcattatc aggtgtccca ggagccctag ggcctcaggg
1321 atttccaggg ctgaaggggg accaaggaaa cccaggccgt accacaattg gagcagctgg
1381 cctccctggc agagatggtt tgccaggccc accaggtcca ccaggcccac ctagtccaga
1441 atttgagact gaaactctac acaacaaaga gtcagggttc cctggtctcc gaggagaaca
1501 aggtccaaaa ggaaacctag gcctcaaagg aataaaagga gactcaggtt tctgtgcttg
1561 tgacggtggt gttcccaaca ctggaccacc cggggaacca ggcccacctg gtccatgggg
1621 tctcataggc cttccaggcc ttaaaggagc cagaggagat cgaggctctg ggggtgcaca
1681 gggcccagca ggggctccag gcttagttgg gcctctgggt ccttcaggac ccaaaggaaa
1741 gaagggggaa ccaattctca gtacaatcca aggaatgcca ggagatcggg gtgattctgg
1801 ctcccagggc ttccgtggtg taataggaga accaggcaag gacggagtac caggtttacc
1861 aggtctgcca ggccttccgg gtgatggtgg acagggcttc ccaggtgaaa aggggttacc
1921 tggacttcct ggtgaaaaag gccatcctgg tccacctggc ctcccaggaa atgggttacc
1981 aggacttcct ggaccccgtg ggcttcctgg agataaaggc aaggatggat taccgggaca
2041 acaaggcctt cccggatcta agggaatcac cctgccctgt attattcctg ggtcatacgg
2101 tccatcagga tttccaggca ctcccggatt cccaggccct aaagggtctc gaggcctccc
2161 tgggacccca ggccagcctg ggtcaagtgg aagtaaagga gagccaggga gtccaggatt
2221 ggttcatctt cctgaattac caggatttcc tggacctcgt ggggagaagg gcttgcctgg
2281 gtttcctggg ctccctggaa aagatggctt gcctgggatg attggcagtc caggcttacc
2341 tggttccaag ggagccactg gtgacatctt tggtgctgaa aatggtgctc cgggggaaca
2401 aggcctacaa ggattaacag ggcacaaagg atttcttgga gactctggcc ttccaggact
2461 caagggtgtg cacgggaagc ctggcttact aggccccaaa ggtgagcggg gcagccctgg
2521 gacaccagga caggtgggac agccaggcac cccaggatct agtggtccat atggcatcaa
2581 gggcaaatct gggctcccag gagcaccagg cttcccaggc atctcaggac atcctggaaa
2641 gaaaggaaca agaggcaaga aaggtcctcc tggatcaatt gtaaagaaag ggctgccagg
2701 gctaaaaggc cttcctggaa atccaggcct agtaggactg aaaggaagcc caggctctcc
2761 aggggtcgct gggttgccag ccctctctgg acccaaggga gagaaggggt ctgttggatt
2821 cgtaggtttt ccaggaatac caggtctgcc tggtattcct ggaacaagag gattaaaagg
2881 aattccagga tcaactggaa aaatgggacc atctggacgc gctggtactc ctggtgaaaa
2941 gggagacaga ggcaatccgg ggccagtcgg aatacctagt ccaagacgtc caatgtcaaa
3001 cctttggctc aaaggagaca aaggctctca aggctcagcc ggatccaatg gatttcctgg
3061 gccaagaggt gacaaaggag aggctggtcg acctggacca ccaggcctac ctggagctcc
3121 tggcctccca ggcattatca aaggagttag tggaaagcca gggccccctg gcttcatggg
3181 aatccggggt ttacctggcc tgaaggggtc ctctgggatc acaggtttcc caggaatgcc
3241 aggagaaagt ggttcacaag gtatcagagg gtcgcctgga ctcccaggag catctggtct
3301 cccaggcctg aaaggagaca acggccagac agttgaaatt tccggtagcc caggacccaa
3361 gggacagcct ggcgaatctg gttttaaagg cacaaaagga agagatggac taataggcaa
3421 tataggcttc cctggaaaca aaggtgaaga tggaaaagtt ggtgtttctg gagatgttgg
3481 ccttcctgga gctccaggat ttccaggagt tgccggcatg agaggagaac caggacttcc
3541 aggttcttct ggtcaccaag gggcaattgg gcctctagga tcccccggat taataggacc
3601 caaaggcttc cctggatttc ctggtttaca tggactgaat gggcttccgg gcaccaaggg
3661 tacccatggc actccaggac ctagtatcac cggtgtgcct gggcctgctg gtctccctgg
3721 acccaaagga gaaaaaggat atccaggaat tggcatcgga gctccaggga agccgggcct
3781 gagagggcaa aaaggtgatc gaggtttccc aggtctccag ggccctgctg gtctccccgg
3841 tgccccaggc atctccttgc cctcactcat agcaggacag cctggtgacc ccgggcgacc
3901 aggcctagat ggagaacgag gccgcccagg ccccgctgga cccccaggtc cccctgggcc
3961 atcctcgaat caaggcgaca ccggagaccc tggcttccct ggaattcctg gacctaaagg
4021 gcctaaggga gaccaaggaa ttccaggttt ttctggcctc cctggagagc taggactgaa
4081 aggcatgaga ggtgagcctg gcttcatggg gactccaggc aaggttgggc cacctggaga
4141 cccaggattt cccggaatga aggggaaggc agggccaaga ggctcttctg gcctccaagg
4201 tgatcctgga caaacaccaa ctgcagaagc tgtccaggtt cctcctggac ccttgggtct
4261 accagggatc gatggcatcc ctggcctcac tggggaccct ggggctcaag gccctgtagg
4321 cctacaaggc tccaaaggtt tacctggcat ccccggtaaa gatggtccca gtgggctccc
4381 aggcccacct ggggctcttg gtgatcctgg tctgcctgga ctgcaaggcc ctccaggatt
4441 tgaaggagct ccagggcagc aaggcccctt cgggatgcct ggaatgcctg gccagagcat
4501 gagagtgggc tacacgttgg taaagcacag ccagtcggaa caggtgcccc cgtgtcccat
4561 cgggatgagc cagctgtggg tggggtacag cttactgttt gtggaggggc aagagaaagc
4621 ccacaaccag gacctgggct ttgctggctc ctgtctgccc cgcttcagca ccatgccctt
4681 catctactgc aacatcaacg aggtgtgcca ctatgccagg cgcaatgata aatcttactg
4741 gctctccact accgccccta tccccatgat gcccgtcagc cagacccaga ttccccagta
4801 catcagccgc tgctctgtgt gtgaggcacc ctcgcaagcc attgctgtgc acagccagga
4861 catcaccatc ccgcagtgcc ccctgggctg gcgcagcctc tggattgggt actctttcct
4921 catgcacact gccgctggtg ccgagggtgg aggccagtcc ctggtctcac ctggctcctg
4981 cctagaggac tttcgggcca ctcctttcat cgaatgcagt ggtgcccgag gcacctgcca
5041 ctactttgca aacaagtaca gtttctggtt gaccacagtg gaggagaggc agcagtttgg
5101 ggagttgcct gtgtctgaaa cgctgaaagc tgggcagctc cacactcgag tcagtcgctg
5161 ccaggtgtgt atgaaaagcc tgtagggtgg cacctgccac tctgcccctt gccctcccct
5221 gcccctcaca acagtcacct cacaaacctg aatggtctga agaaggaagg cctgagcccc
5281 tttgctgatc aagttgtaca ttggagtctc atttgggcta gactaccgga cactcgtcac
5341 cccagccctc gggtccatag agatgagccc accctgctga gatctgctgt cctgtttctg
5401 tcaagctggt gctactgttt gatttggatg attgtgtgac tattcatggc tacctcagaa
5461 agatttgatg ggccacaact gtcttagact gctagctttc tccttaccgt cttgatcgga
5521 aagctcttcc taatcgctaa tcagtcattt cttcatgtac agaggtcagc acacattatt
5581 tggtttaaac cagaacccag tgtttccaca cttaaattct ctaaccgaat attcatggat
5641 ggctcaagtc tgcacagagc aagtcctcac tcttcaagga ggcccacttg tgtcttaggc
5701 aggcaagaga attgaaatga gggtgccacc ca
//