LOCUS       U00921                  6853 bp    DNA     linear   HUM 16-MAY-1997
DEFINITION  Homo sapiens Lst-1 gene, complete cds.
ACCESSION   U00921
VERSION     U00921.1
KEYWORDS    .
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 6853)
  AUTHORS   Holzinger,I., de Baey,A., Messer,G., Kick,G., Zwierzina,H. and
            Weiss,E.H.
  TITLE     Cloning and genomic characterization of LST1: a new gene in the
            human TNF region
  JOURNAL   Immunogenetics 42 (5), 315-322 (1995)
   PUBMED   7590964
REFERENCE   2  (bases 1 to 6853)
  AUTHORS   Holzinger,I.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-AUG-1993) Ingrid Holzinger, Human Genetics, Institute
            of Anthropology and Human Genetics, Luisenst. 37 80333 Munich,
            Munich, Bavaria 80333, Germany
COMMENT     On May 16, 1997 this sequence version replaced gi:392935.
FEATURES             Location/Qualifiers
     source          1..6853
                     /organism="Homo sapiens"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:9606"
                     /chromosome="6"
                     /map="6p21.3"
                     /clone="CAH5"
                     /haplotype="A3 Bw47 Cw6 DR7"
                     /cell_type="B-LCL"
                     /tissue_type="blood"
                     /clone_lib="CAH"
     gene            2302..3977
                     /gene="Lst-1"
     exon            2302..2420
                     /gene="Lst-1"
     CDS             join(2418..2420,2743..2836,3612..3772)
                     /gene="Lst-1"
                     /note="B144 homolog"
                     /codon_start=1
                     /protein_id="AAB57724.1"
                     /translation="MIYVSTGAWGWAGSCFWQWSFCPPACVGCIEEEAQGSSEQELHY
                     ASLQRLPVPSSEGPDLRGRDKRGTKEDPRADYACIAENKPT"
     exon            2743..2836
                     /gene="Lst-1"
     repeat_region   3256..3348
                     /gene="Lst-1"
                     /note="microsatellite Tnf e"
                     /rpt_type=tandem
     repeat_region   3349..3477
                     /gene="Lst-1"
                     /rpt_family="Alu"
                     /rpt_type=dispersed
     repeat_region   3430..3574
                     /gene="Lst-1"
                     /note="microsatellite Tnf d"
                     /rpt_type=tandem
     exon            3612..3977
                     /gene="Lst-1"
     regulatory      3971..3977
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Lst-1"
     repeat_region   5416..5703
                     /rpt_family="Alu"
                     /rpt_type=dispersed
     repeat_region   5945..6210
                     /rpt_family="Alu"
                     /rpt_type=dispersed
     repeat_region   6419..6560
                     /rpt_family="MER5"
                     /rpt_type=dispersed
     repeat_region   6630..6853
                     /rpt_family="Alu"
                     /rpt_type=dispersed
BASE COUNT         1798 a         1724 c         1832 g         1499 t
ORIGIN      
        1 aagcttctga agggtttaga tgtaaaatgt actgatattt gtaattttaa aagatattta
       61 aaagtgagat ggattgataa atatgtgata aagcaaataa aaaatgttaa tagagccagg
      121 tgcagtggcc cactcctgta attccagcac tttggaaggc taaggtggaa agattgcttg
      181 agaccaggag ttcaaaatca gcctgggcaa catagtaaga ccccatttct acaaagcctc
      241 atgtggtagc tggtgtctgt agtcctagct actcagaagg ctaaggtggg aggacctctg
      301 agcccaggaa ttcaattctg cagtgagcta tgatttcacc actgcacttc aggctgagtg
      361 acagagtgag accccatctc aaaaacaaaa caaaacaaaa aatgttaata gtagcatcta
      421 ggtggtaaga atatgttcac tgtacaatta ttctcatttc accctatgtt tgcacttttt
      481 aataataaaa tgtaaaaaaa acaaaacaaa caaacaaaaa accctgaata ttattcagca
      541 tggggaacat ggaggatggg gagaagggtg ggggaggaag tagaaggttc ttgaatttgg
      601 aaggggaaac gcaaattaat atggacccac ccaggcacca catctcctcc tcaccccttg
      661 ccttacaggc gctccccagt cttcaccctc ctcaaggagt gggtgtgcaa tcctccagca
      721 cccatctcct tctccatcac agtgccacta agaagccttc acccaggtct ctccagagag
      781 cctcaggccg ctgcctttac ttagttctgt gttcaatgcc agaatgctgc ctcctacagg
      841 aagtccacct gtattgccca cacctccttt cctgtcacca acttgtcacc aactttctgt
      901 ccttgatcta tccacagggc tcatgtagat ctagtatggc tgcctttaac tctcatgttt
      961 gttaatcaga cagccaagca gcctgctgca tagagctgca gaacaccaaa tatgccagag
     1021 ctcccagtct gaactggagc agggtacatg tgtccacaga catatgccaa gatcaagagg
     1081 tctcaacaga tgcagtgtaa gaggtaatag agaagagtta atcaaggaag acacctgaag
     1141 gtggtgggtg tttgctgact agtggcagga tcagtgaaat gactggagct gaggcagatt
     1201 atggccctag ctacaggccc agaagtttga aaagaaagat gttgtaaccc taaccctgga
     1261 gccgaacttc ctctcctaac aatgctgggg aggaacccag gctgggggag aagttaaagc
     1321 cagaggaggg gcaggaatgt ctgaggtggc aacacttctc ttcagccaga cagcactggc
     1381 cagtttggag tctgtccatc ctgcaggcca caagctctgg gtaagctggg aatgggcagg
     1441 gaccttggtg gaaggatggt cacaccccag agtggggtga agctaagatg aggggaggga
     1501 gagtatgggt ttgagtttcc ctgggccgtc gaggaatcct ctgagtctct gctccccaaa
     1561 gaaattaaag acaattcatt tctgtgccca cggcccttat ggctccacct gcacttctgc
     1621 tccccacccc ccagaattcc tcttaaaccc agaaggtccc agtttccaga ccctagtcag
     1681 tatatctggc tctggggtga agagaacggc cccctcttca ccctcaaaca ggaaccagtg
     1741 gttggagggg aggaagtgcc tgaggggaag ttatggggcc ccagatactc ctccatgccc
     1801 cacttcagcc ctagcagcat ctgcctgtgg gaagcagctc tccacaccag ccaagggggc
     1861 ccccacactc ccgcgctgct ctgcggctca gggagcagcc cacctgctgg gtgtgctgat
     1921 atcaccctcc cttcttcccc ccagtgccca cacccaccca ggcccaggct ccttcccctc
     1981 catcatcccc ttaccagcac ctagaaccat ccagggctga aaagtcccct ccaaaccacg
     2041 tggtcagccc agggcagagg aaagggctgg gctctggagt tgggcagagc tggccttaaa
     2101 ccccagctcc acctttctgg gatgggtgac ctagtaaagt ccaggcttga atctcgggtc
     2161 tttacttggg caacgggcac catgataccc tatgttctgg ggattagcag tgaggaatgg
     2221 aaagtgccca gctcgggttg gcacataagg gaggctcccc agcctgggaa cgattataac
     2281 agagggcccc tcacttcaca gatgaggaac ttgaggcaag tcaccagccc ctgatcattt
     2341 cgcctaaaag agcaaggact agagttcctg acctccaggc cagtccctga tccctgacct
     2401 aatgttatcg cggaatgatg gtaagtaaag tgtctcttgc atctgcatag agagagtcct
     2461 gggagcttag gaagtgatgg ggaacagtga tgtatgcagc tcatgactag gtggacaggc
     2521 ctctggggac agctggtaca ggagggaaag ggacctcacg ggaggcccag aaacctggta
     2581 agaggtgagg tattaaggtc tgggatggag aagctctgag ggtatatttt tctgcctcta
     2641 aaactgttgg agagggaatc tgagaaagct gcaaccaacc aggaggctgg ggtacgctgg
     2701 agaaggaatg ggcttcctaa ccttgagccc tcttccctga agatatatgt atctacgggg
     2761 gcctggggct gggcgggctc ctgcttctgg cagtggtcct tctgtccgcc tgcctgtgtt
     2821 ggctgcatcg aagaggtgag cgctgcactc cctccctccc cctgcagcag tgccccctgt
     2881 gcccccaccc ccacacgctt tcccactgct ttcccagaac actgcctggc cctggagcca
     2941 ctgggaagcc aacaggggag tccacgcctg ctggtggggg gagcccggga ggcgggagaa
     3001 gcacaaaggg tgggctgtgt tgagcttctt cttttcttcc agtaaagagg ctggagagga
     3061 gctgggtgag tctggggaca gggaaggggg agggcaagag agatcctgag tgggtgagtg
     3121 gggagaagca tggctgagcg ctgagaggag ggttggggac gggagacaag gagagagaaa
     3181 gtaggagcat gagagaggca gagaaaatcg aggcaaaaga gaaagagaaa atgagacaga
     3241 aaccaagaga aaaagtgaga cagaggatag gagagacagg gagaaaatga gagtgagaga
     3301 gacacaaaga gaagagcaat gaaagagaga gagagagaga ggctccagaa ccaggcacag
     3361 tggctcacgt ctgtcattcc actatcgcaa ggctgaggca ggaagatagc ttgagctcag
     3421 gggttgaaga caatcctgga caacatagtg gactctgtct ccaaagaaaa aagagagaga
     3481 gagagagaga gagagagagg gagagagaga gagagagagg gagagaagta agaaaggctg
     3541 gaggtgggag cagaactcac agggaaggat ctgacgcatc gcctcccatc agcaccttct
     3601 gtcctggtcc caggcccagg gctcctcaga gcaggaactc cactatgcat ctctgcagag
     3661 gctgccagtg cccagcagtg agggacctga cctcaggggc agagacaaga gaggcaccaa
     3721 ggaggatcca agagctgact atgcctgcat tgctgagaac aaacccacct gagcacccca
     3781 gacaccttcc tcaacccagg cgggtggaca gggtccccct gtggtccagc cagtaaaaac
     3841 catggtcccc ccacttctgt gtctcagtcc tctcagtcca tctcgagcct ccgttcaaat
     3901 tgatcatcat caaaacttat gtggcttttt gacctttgaa tagggaattt tttaaatttt
     3961 ttaaaaatta aaataaaaaa aacacatggc tcacccttcc acccactctg gggtcaaata
     4021 gtaatttgtt gggtgaatga cagtgttcag ggacccaagc tcccctaaca gccagaagag
     4081 ggtatgtgtg ggcctggcag gaaagggcag ttgccaagga ggagtcatat ctgatccttc
     4141 ccatttctca ggacaatcag gctcagcctc ctgggactgg gggaagcaga tgtgctgagc
     4201 tcccacatgg tggtgggagg ggcgctggga ccacagccgg cagctgcctt cttggacctt
     4261 tccaggtcag acctggtgga agggaaagtt cagagttggg ggaatccgga gagagtagat
     4321 ttggcatctg gagaatggag aagaaaacac ttgagactca tgaggagtta gtggtggggc
     4381 agatttattg gggtcttttg aagaggacta gggacatctg ggctctggaa tcactcctcg
     4441 gggcccatct gaggagtggc agtgtgttcc catgtgacag tggcctggtc agagagagga
     4501 caggagctgc tcagtgttgc agtcccgagg ctctcctctt cctggtctct gtcctccctc
     4561 ctcccactct cttactgccc ctcccatccc gtccactatt gcccctggct ccattactca
     4621 catttgccct ggtaatagac ggtgctgccc acggccacag agagaaagct gacagcatag
     4681 aatccagccc gaaggaggag gactgtacca gcccctagct gaggatgttc tgcatggggc
     4741 aatggagacg ggggttgggg aagaagtgca cacaggctca gggagggaag gggcctcaga
     4801 ggagcatccc tgcctcccaa ggacattgcc tcttggggcc tccagccagg aggagacacc
     4861 acctcccagc atctcacctt tctccaccac cagccgagtc ccattccctg tcccgacacc
     4921 aaggcccagc acctccactc tgcacacgta gatgctggcg tcatggcctc gcacgtcccg
     4981 gatgtgcagc tcagcctggt ggtcatggag gaaacgggaa gaagcaagtg gggccaggcg
     5041 gcccctgaac tctggggttc cattcctcac ctccttccct ggaaccacct catctcggaa
     5101 ccacgtgacg gagccaatgg ccagtctccc ttggctggca ttgaaggagc agggcaggaa
     5161 ggcagaggat ccttccaggg tacgaatctc agggggctgg gacacccaga gagcacagga
     5221 atcctggggg gaaaagggag acccagagaa acacctcccc agttattcca aagagaaaag
     5281 acaacagagc ttggagtaga acatcccagc tttctccagg catagggtgc atgggaatag
     5341 atactttggg gcctcattaa acccttccct cttaaccaat ctgatttctt aacattgctt
     5401 attaaatcat ttttcggctg ggtgcagtcg cacgcctgta atcccagcac tttgggaggc
     5461 cgaggtgggc ggatcaccag gtcaggagat cgagaccatc ctggccaaca tggtgaaacc
     5521 ccgtctctac taaaaaaata caaaaattag ccgggcatgg tggtgtgcac ctgtaatccc
     5581 agctactcgg gaggctgagg caggagaatc gcttgaaccc gggaggcaga ggttgcagtg
     5641 agccaagatt gcgccattgc actccagcct gggcgacaaa gcaagactcc atctcaaaaa
     5701 ataaaaaata aaaatcattt ttcaaattct tcctatacca actctcactc tcaccctctg
     5761 ccatcattct ccagccagtt cagtagtaac ttgtctagct gaaatgtaaa ccatcatggt
     5821 gaaattaagc tcattaatga attgcagctg cctagttaac taatatcact cattatatta
     5881 tgcaggtatt attttagtac aaatggcatt gtacagtaag ccatccttcc tctttttctt
     5941 ttttcttttt ttgagatggg gtcttgctct gttgcccagg ctggaatgca gtggtgcaat
     6001 cttggctcac tgcaaactcc gtcccctggg ttcaagcgat cctggtgcct cagcctccca
     6061 agtagctggg actacaggca cccaccacca cgactggcta atttttgtat tttcagtcga
     6121 gacagggttt ccaccatctg gtctcaaact cctgacctca agtgatccac ccacctcgga
     6181 ccaggctggc tcaaactcct gatctcaagt gatccacctg cctcggcctc ccaaagtgcc
     6241 acccagccac tcttggtttt cgttaaagaa agtaactaat taaatctcca ggtgaagacg
     6301 tggccttaat tggttgagat tcctatttaa cccgtccatg ttgatgaatt aaaccaaata
     6361 ttaaaatccc tgattaaatt atctacttag ggaaatttac aagtcattct atttcagtgg
     6421 ttctcaaact tgagtgtgta tggaaattac ctggagcatc tgctagaaca gattcctggg
     6481 cctacccccc gagtttttga ctcagtaggt ctggagtggg gcctaagaat ttgttctagg
     6541 ttcccagaaa tccacatttt gagaactcct gcatttagtt aataatatgc ctgatagtta
     6601 aggtctctca gttcattaaa aacagtttcg gccgggtgca gttcgcacgc ctataatccc
     6661 aacactttgg gaggccaagg cgagtggatc acctgaggtc aggagtttga gaccagcctg
     6721 gccaacatgg tgaaacctcg tctctactaa aaatacacaa gttagccagc agtaatggca
     6781 tgcacctgta atcctagcta cttgggaggc tgagacagga gaatcatttt tacccaggag
     6841 gtggaggctg cag
//