LOCUS HUMTHROM 687 bp mRNA linear HUM 03-AUG-1993 DEFINITION Human thrombospondin mRNA, 3' end. ACCESSION M99425 VERSION M99425.1 KEYWORDS neutrophil protein; thrombospondin. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (sites) AUTHORS Hennessy,S.W., Frazier,B.A., Kim,D.D., Deckwerth,T.L., Baumgartel,D.M., Rotwein,P. and Frazier,W.A. TITLE Complete thrombospondin mRNA sequence includes potential regulatory sites in the 3' untranslated region JOURNAL J. Cell Biol. 108 (2), 729-736 (1989) PUBMED 2918029 REFERENCE 2 (bases 1 to 687) AUTHORS La Fleur,M., Jobin,C., Gauthier,J. and Kreis,C.G. TITLE Expression of thrombospondin in chronic inflammation: Neutrophils from synovial fluids synthesize a novel 3.9 kb TSP mRNA JOURNAL Unpublished COMMENT Original source text: Homo sapiens (library: pTZ18R) synovial fluid cDNA to mRNA. FEATURES Location/Qualifiers source 1..687 /db_xref="H-InvDB:HIT000197037" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /tissue_type="synovial fluid" /tissue_lib="pTZ18R" CDS <1..434 /standard_name="neutrophil thrombospondin" /codon_start=3 /product="thrombospondin" /protein_id="AAB59366.1" /translation="GYQSSSRFYVVMWKQVTQSYWDTNPTRAQGYSGLSVKVVNSTTG PGEHLRNALWHTGNTPGQVRTLWHDPRHIGWKDFTAYRWRLSHRPKTGFIRVVMYEGK KIMADSGPIYDKTYAGGRLGLFVFSQEMVFFSDLKYECRDP" 3'UTR 435..687 /note="3' UTR sequence is shorter than published sequence (X14787)" /citation=[1] misc_difference 622..623 /note="conflict" /citation=[1] /replace="atcag" regulatory 660..665 /regulatory_class="polyA_signal_sequence" /note="non-canonical poly A signal" polyA_site 687 BASE COUNT 179 a 174 c 159 g 175 t ORIGIN 1 ttggctacca gtccagcagc cgcttttatg ttgtgatgtg gaagcaagtc acccagtcct 61 actgggacac caaccccacg agggctcagg gatactcggg cctttctgtg aaagttgtaa 121 actccaccac agggcctggc gagcacctgc ggaacgccct gtggcacaca ggaaacaccc 181 ctggccaggt gcgcaccctg tggcatgacc ctcgtcacat aggctggaaa gatttcaccg 241 cctacagatg gcgtctcagc cacaggccaa agacgggttt cattagagtg gtgatgtatg 301 aagggaagaa aatcatggct gactcaggac ccatctatga taaaacctat gctggtggta 361 gactagggtt gtttgtcttc tctcaagaaa tggtgttctt ctctgacctg aaatacgaat 421 gtagagatcc ctaatcatca aattgttgat tgaaagactg atcataaacc aatgctggta 481 ttgcaccttc tggaactatg ggcttgagaa aacccccagg atcacttctc cttggcttcc 541 ttcttttctg tgcttgcatc agtgtggact cctagaacgt gcgacctgcc tcaagaaaat 601 gcagttttca aaaacagact cagcattcag cctccaatga ataagacatc ttccaagcat 661 ataaacaatt gctttggttt ccttttg //