LOCUS HUMCOLA5IV 4816 bp mRNA linear HUM 15-MAY-1996
DEFINITION Human alpha-5 collagen type IV (COL4A5) mRNA, 3' end.
ACCESSION M58526 J05558
VERSION M58526.1
KEYWORDS alpha-5 type IV collagen.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4816)
AUTHORS Pihlajaniemi,T., Pohjolainen,E.R. and Myers,J.C.
TITLE Complete primary structure of the triple-helical region and the
carboxyl-terminal domain of a new type IV collagen chain, alpha
5(IV)
JOURNAL J. Biol. Chem. 265 (23), 13758-13766 (1990)
PUBMED 2380186
COMMENT On May 15, 1996 this sequence version replaced gi:180859.
Original source text: Human cDNA to mRNA.
FEATURES Location/Qualifiers
source 1..4816
/db_xref="H-InvDB:HIT000195874"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="X"
/map="Xq22"
/clone="PF7,PF6,HE6,PF17"
/tissue_type="placenta"
gene 1..4816
/gene="COL4A5"
CDS <1..4816
/gene="COL4A5"
/codon_start=2
/product="alpha-5 type IV collagen"
/protein_id="AAA99480.1"
/translation="ECWPPGPKGIRGPPGLPGFPGTPGLPGMPGHDGAPGPQGIPGCN
GTKGERGFPGSPGFPGLQGPPGPPGIPGMKGEPGSIIMSSLPGPKGNPGYPGPPGIQG
LPGPTGIPGPIGPPGPPGLMGPPGPPGLPGPKGNMGLNFQGPKGEKGEQGLQGPPGPP
GQISEQKRPIDVEFQKGDQGLPGDRGPPGPPGIRGPPGPPGGEKGEKGEQGEPGKRGK
PGKDGENGQPGIPGLPGDPGYPGEPGRDGEKGQKGDTGPPGPPGLVIPRPGTGITIGE
KGNIGLPGLPGEKGERGFPGIQGPPGLPGPPGAAVMGPPGPPGFPGERGQKGDEGPPG
ISIPGPPGLDGQPGAPGLPGPPGPGSPHIPPSDEICEPGPPGPPGSPGDKGLQGEQGV
KGDKGDTCFNCIGTGISGPPGQPGLPGLPGPPGSLGFPGQKGEKGQAGATGPKGLPGI
PGAPGAPGFPGSKGEPGDILTFPGMKGDKGELGSPGAPGLPGLPGTPGQDGLPGLPGP
KGEPGGITFKGERGPPGNPGLPGLPGNIGPMGPPGLALQGPVGEKGIQGVAGNPGQPG
IPGPKGDPGQTITQPGKPGFRGNPGRDGDVGLPGDPGLPGQPGLPGIPGSKGEPGIPG
IGLPGPPGPKGFPGIPGPPGAPGTPGRIGLEGPPGPPGFPGPKGEPGFALPGPPGPPG
LPGFKGALGPKGDRGFPGPPGPPGRTGLDGLPGPKGDVGPNGQPGPMGPPGLPGIGVQ
GPPGPPGIPGPIGQPGLHGIPGEKGDPGPPGLDVPGPPGERGSPGIPGAPGPIGPPGS
PGLPGKAGRSGFPGTKGEMGMMGPPGPPGPLGIPGRSGVPGLKGDDGLQGQPGLPGPT
GEKGSKGEPGLPGPPGPMDPNLLGSKGEKGEPGLPGIPGVSGPKGYQGLPGDPGQPGL
SGQPGLPGPPGPKGNPGLPGQPGLIGPPGLKGTIGDMGFPGPQGVEGPPGPSGVPGQP
GSPGLPGQKGDKGDPGISSIGLPGLPGPKGEPGLPGYPGNPGIKGSVGDPGLPGLPGT
PGAKGQPGLPGFPGTPGPPGPKGISGPPGNPGLPGEPGPVGGGGHPGQPGPPGEKGKP
GQDGIPGPAGQKGEPGQPGFGNPGPPGLPGLSGQKGDGGLPGIPGNPGLPGPKGEPGF
HGFPGVQGPPGPPGSPGPALEGPKGNPGPQGPPGRPGLPGPEGPPGLPGNGGIKGEKG
NPGQPGLPGLPGLKGDQGPPGLQGNPGRPGLNGMKGDPGLPGVPGFPGMKGPSGVPGS
AGPEGEPGLIGPPGPPGLPGPSGQSIIIKGDAGPPGIPGQPGLKGLPGPQGPQGLPGP
TGPPGDPGRNGLPGFDGAGGRKGDPGLPGQPGTRGLDGPPGPDGLQGPPGPPGTSSVA
HGFLITRHSQTTDAPQCPQGTLQVYEGFSLLYVQGNKRAHGQDLGTAGSCLRRFSTMP
FMFCNINNVCNFASRNDYSYWLSTPEPMPMSMQPLKGQSIQPFISRCAVCEAPAVVIA
VHSQTIQIPHCPQGWDSLWIGYSFMMHTSAGAEGSGQALASPGSCLEEFRSAPFIECH
GRGTCNYYANSYSFWLATVDVSDMFSKPQSETLKAGDLRTRISRCQVCMKRT"
BASE COUNT 1163 a 1270 c 1398 g 985 t
ORIGIN
1 ggagtgttgg ccaccaggac caaaaggaat cagaggtcct cctggacttc ctggatttcc
61 agggacacca ggtcttcctg gaatgccagg ccacgatggg gccccaggac ctcaaggtat
121 tcccggatgc aatggaacca agggagaacg tggatttcca ggcagtcccg gttttcctgg
181 tttacagggt cctccaggac cccctgggat cccaggtatg aagggtgaac caggtagtat
241 aattatgtca tcactgccag gaccaaaggg taatccagga tatccaggtc ctcctggaat
301 acaaggccta cctggtccca ctggtatacc agggccaatt ggtcccccag gaccaccagg
361 tttgatgggc cctcctggtc caccaggact tccaggacct aaggggaata tgggcttaaa
421 tttccaggga cccaaaggtg aaaaaggtga gcaaggtctt cagggcccac ctgggccacc
481 tgggcagatc agtgaacaga aaagaccaat tgatgtagag tttcagaaag gagatcaggg
541 acttcctggt gaccgagggc ctcctggacc tccagggata cgtggtcctc caggtccccc
601 aggtggtgag aaaggtgaga agggtgagca aggagagcca ggcaaaagag gtaaaccagg
661 caaagatgga gaaaatggcc aaccaggaat tcctggtttg cctggtgatc ctggttaccc
721 tggtgaaccc ggaagggatg gtgaaaaggg ccaaaaaggt gacactggcc cacctggacc
781 tcctggactt gtaattccta gacctgggac tggtataact ataggagaaa aaggaaacat
841 tgggttgcct gggttgcctg gagaaaaagg agagcgagga tttcctggaa tacagggtcc
901 acctggcctt cctggacctc caggggctgc agttatgggt cctcctggcc ctcctggatt
961 tcctggagaa aggggtcaga aaggtgatga aggaccacct ggaatttcca ttcctggacc
1021 tcctggactt gacggacagc ctggggctcc tgggcttcca gggcctcctg gccctggaag
1081 cccacacatt cctcctagtg atgagatatg tgaaccaggc cctccaggcc ccccaggatc
1141 tccaggtgat aaaggactcc aaggagaaca aggagtgaaa ggtgacaaag gtgacacttg
1201 cttcaactgc attggaactg gtatttcagg gcctccaggt caacctggtt tgccaggtct
1261 cccaggtcct ccaggatctc ttggtttccc tggacagaaa ggggaaaaag gacaagctgg
1321 tgcaactggt cccaaaggat taccaggcat tccaggagct ccaggtgctc caggctttcc
1381 tggatctaaa ggtgaacctg gtgatatcct cacttttcca ggaatgaagg gtgacaaagg
1441 agagttgggt tcccctggag ctccagggct tcctggttta cctggcactc ctggacagga
1501 tggattgcca gggcttcctg gcccgaaagg agagcctggt ggaattactt ttaagggtga
1561 aagaggtccc cctgggaacc caggtttacc aggcctccca gggaatatag ggcctatggg
1621 tccccctggt ttggccctcc agggcccagt aggtgaaaaa ggcatacaag gtgtggcagg
1681 aaatccaggc cagccaggaa taccaggtcc taaaggggat ccaggtcaga ctataaccca
1741 gccggggaag cctggcttcc gtggtaaccc aggcagagat ggtgatgtag gtcttccagg
1801 tgaccctgga cttccagggc aaccaggctt gccagggata cctggtagca aaggagaacc
1861 aggtatccct ggaattgggc ttcctggacc acctggtccc aaaggctttc ctggaattcc
1921 aggacctcca ggagcacctg ggacacctgg aagaattggt ctagaaggcc ctcctgggcc
1981 acccggcttt ccaggaccaa agggtgaacc aggatttgca ttacctgggc cacctgggcc
2041 accaggactt ccaggtttca aaggagcact tggtccaaaa ggtgatcgtg gtttcccagg
2101 acctccgggt cctccaggac gcactggctt agatgggctc cctggaccaa aaggtgatgt
2161 tggaccaaat ggacaacctg gaccaatggg acctcctggg ctgccaggaa taggtgttca
2221 gggaccacca ggaccaccag ggattcctgg gccaataggt caacctggtt tacatggaat
2281 accaggagag aagggggatc caggacctcc tggacttgat gttccaggac ccccaggtga
2341 aagaggcagt ccagggatcc ccggagcacc tggtcctata ggacctccag gatcaccagg
2401 gcttccagga aaagcaggtc ggtctggatt tccaggtacc aaaggtgaaa tgggtatgat
2461 gggacctcca ggcccaccag gacctttggg aattcctggc aggagtggtg tacctggtct
2521 taaaggtgat gatggcttgc agggtcagcc aggacttcct ggccctacag gagaaaaagg
2581 tagtaaagga gagcctggcc ttccaggccc tcctggacca atggatccaa atcttctggg
2641 ctcaaaagga gagaaggggg aacctggctt accaggtata cctggagttt cagggccaaa
2701 aggttatcag ggtttgcctg gagacccagg gcaacctgga ctgagtggac aacctggatt
2761 accaggacca ccaggtccca aaggtaaccc tggtctccct ggacagccag gtcttatagg
2821 acctcctgga cttaaaggaa ccatcggtga tatgggtttt ccagggcctc agggtgtgga
2881 agggcctcct ggaccttctg gagttcctgg acaacctggc tccccaggat tacctggaca
2941 gaaaggcgac aaaggtgatc ctggtatttc aagcattggt cttccaggtc ttcctggtcc
3001 aaagggtgag cctggtctgc ctggataccc agggaaccct ggtatcaaag gttctgtggg
3061 agatcctggt ttgcccggat taccaggaac ccctggagca aaaggacaac caggccttcc
3121 tggattccca ggaaccccag gccctcctgg accaaaaggt attagtggcc ctcctgggaa
3181 ccccggcctt ccaggagaac ctggtcctgt aggtggtgga ggtcatcctg ggcaaccagg
3241 gcctccaggc gaaaaaggca aacccggtca agatggtatt cctggaccag ctggacagaa
3301 gggtgaacca ggtcaaccag gctttggaaa cccaggaccc cctggacttc caggactttc
3361 tggccaaaag ggtgatggag gattacctgg gattccagga aatcctggcc ttccaggtcc
3421 aaagggcgaa ccaggctttc acggtttccc tggtgtgcag ggtcccccag gccctcctgg
3481 ttctccgggt ccagctctgg aaggacctaa aggcaaccct gggccccaag gtcctcctgg
3541 gagaccaggt ctaccaggtc cagaaggtcc tccaggtctc cctggaaatg gaggtattaa
3601 aggagagaag ggaaatccag gccaacctgg gctacctggc ttgcctggtt tgaaaggaga
3661 tcaaggacca ccaggactcc agggtaatcc tggccggccg ggtctcaatg gaatgaaagg
3721 agatcctggt ctccctggtg ttccaggatt cccaggcatg aaaggaccca gtggagtacc
3781 tggatcagct ggccctgagg gggaaccggg acttattggt cctccaggcc ctcctggatt
3841 acctggtcct tcaggacaga gtatcataat taaaggagat gctggtcctc caggaatccc
3901 tggccagcct gggctaaagg gtctaccagg accccaagga cctcaaggct taccaggtcc
3961 aactggccct ccaggagatc ctggacgcaa tggactccct ggctttgatg gtgcaggagg
4021 gcgcaaagga gacccaggtc tgccaggaca gccaggtacc cgtggtttgg atggtccccc
4081 tggtccagat ggattgcaag gtcccccagg tccccctgga acctcctctg ttgcacatgg
4141 atttcttatt acacgccaca gccagacaac ggatgcacca caatgcccac agggaacact
4201 tcaggtctat gaaggctttt ctctcctgta tgtacaagga aataaaagag cccacggtca
4261 agacttgggg acggctggca gctgccttcg tcgctttagt accatgcctt tcatgttctg
4321 caacatcaat aatgtttgca actttgcttc aagaaatgac tattcttact ggctctctac
4381 cccagagccc atgccaatga gcatgcaacc cctaaagggc cagagcatcc agccattcat
4441 tagtcgatgt gcagtatgtg aagctccagc tgtggtgatc gcagttcaca gtcagacgat
4501 ccagattccc cattgtcctc agggatggga ttctctgtgg attggttatt ccttcatgat
4561 gcatacaagt gcaggggcag aaggctcagg tcaagcccta gcctcccctg gttcctgctt
4621 ggaagagttt cgttcagctc ccttcatcga atgtcatggg aggggtacct gtaactacta
4681 tgccaactcc tacagctttt ggctggcaac tgtagatgtg tcagacatgt tcagtaaacc
4741 tcagtcagaa acgctgaaag caggagactt gaggacacga attagccgat gtcaagtgtg
4801 catgaagagg acataa
//