LOCUS AH001508 3332 bp DNA linear HUM 01-AUG-2016
DEFINITION Homo sapiens MHC HLA-RD protein gene, complete cds.
ACCESSION AH001508 M30115 M32274 M32275 M32276 M33230 M33231
VERSION AH001508.2
KEYWORDS class III gene; major histocompatibility complex.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3332)
AUTHORS Speiser,P.W. and White,P.C.
TITLE Structure of the human RD gene: a highly conserved gene in the
class III region of the major histocompatibility complex
JOURNAL DNA 8 (10), 745-751 (1989)
PUBMED 2612324
COMMENT On or before Aug 1, 2016 this sequence version replaced M32274.1,
M32275.1, M32276.1, M33230.1, M33231.1, AH001508.1.
FEATURES Location/Qualifiers
source 1..3332
/organism="Homo sapiens"
/mol_type="genomic DNA"
/db_xref="taxon:9606"
prim_transcript 130..>373
/note="MHC HLA-RD mRNA and intron"
intron 362..>373
/note="MHC HLA-RD intron A"
gap 374..473
/estimated_length=unknown
intron <474..485
/note="MHC HLA-RD intron A"
CDS join(494..568,694..763,865..1010,1135..1212,1335..1372,
1540..1877,1988..2135,2305..2359,2610..2712,3163..3260)
/note="MHC HLA-RD protein"
/codon_start=1
/protein_id="AAA36308.1"
/translation="MLVIPPGLSEEEEALQKKFNKLKKKKKALLALKKQSSSSTTSQG
GVKRSLSEQPVMDTATATEQAKQLVKSGAISAIKAETKNSGFKRSRTLEGKLKDPEKG
PVPTFQPFQRSISADDDDLQESSRRPQRKSLYESFVSSSDRLRELGPDGEEAEGPGAG
DGPPRSFDWGYEERSGAHSSASPPRSRSRDRSHERNRDRDRDRERDRDRDRDRDRERD
RDRDRDRDRDRERDRDRERDRDRDREGPFRRSDSFPERRAPRKGNTLYDVYGEDMTPT
LLRGAFSPFGNIIDLSMDPPRNCAFVTYEKMESADQAAAELNGTQVESVQLKDNIARK
QPMLDAATGKSVWGALAVQNSPKGCHRDKRTQIVYSDDVYKENLVDGF"
exon <494..568
/note="MHC HLA-RD protein, (first expressed exon)"
/number=2
intron 569..>580
/note="MHC HLA-RD intron B"
gap 581..680
/estimated_length=unknown
intron <681..693
/note="MHC HLA-RD intron B"
exon 694..763
/number=3
intron 764..864
/note="MHC HLA-RD intron C"
exon 865..1010
/number=4
intron 1011..>1022
/note="MHC HLA-RD intron D"
gap 1023..1122
/estimated_length=unknown
intron <1123..1134
/note="MHC HLA-RD intron D"
exon 1135..1212
/number=5
intron 1213..1334
/note="MHC HLA-RD intron E"
exon 1335..1372
/number=6
intron 1373..1539
/note="MHC HLA-RD intron F"
exon 1540..1877
/number=7
intron 1878..1987
/note="MHC HLA-RD intron G"
exon 1988..2135
/number=8
intron 2136..2304
/note="MHC HLA-RD intron H"
exon 2305..2359
/number=9
intron 2360..2609
/note="MHC HLA-RD intron I"
exon 2610..2712
/number=10
intron 2713..>2997
/note="MHC HLA-RD intron J"
gap 2998..3097
/estimated_length=unknown
intron <3098..3162
/note="MHC HLA-RD intron J"
exon 3163..>3260
/note="MHC HLA-RD protein"
/number=11
BASE COUNT 664 a 789 c 811 g 668 t
ORIGIN Chromosome 6p23.
1 gcccgcccgg aacggcgaag tagaggcact tccggtacag ccccgccgag agcgtgaact
61 atcgctgcgg aggggcagac ctggaccggt ggaaggccgg gcggaagtgc ccggcgcctg
121 gggccgcctt ggttacgttt tccgctcctc gctacgtcat cgttgtgagc ccgctatcag
181 cggccagcgc gggcgcggcc ggaggaccgt ggggcccccg gttgccgccc cctcgggtaa
241 ggccctctgc ttctcactct tcggcccttt ttctcatagc cgtttctctg ttcttcctct
301 ttgcgttgct ctgcggggcc tacgctggct ccaccgcctt ctctgccgtt caaaccccgc
361 ggttgtccta cccnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
421 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnncccctga
481 actaggagcc accatgttgg tgataccccc cggactgagc gaggaagagg aggctctgca
541 gaagaaattc aacaagctca agaaaaaggt gagggactgt nnnnnnnnnn nnnnnnnnnn
601 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
661 nnnnnnnnnn nnnnnnnnnn cccttgttcc cagaaaaagg cattgctggc tctgaagaag
721 caaagtagca gcagcacaac cagccaaggt ggtgtcaaac gctgtgagtg acagggaaat
781 ggggatggac tggaagtggg cagcatggag ctgaccttca tcatggcttg gccaacataa
841 tgcctcttcc ccttgtctct ccagcactat cagagcagcc tgtcatggac acagccacag
901 caacagagca ggcaaagcag ctggtgaagt caggagccat cagtgccatc aaggctgaga
961 ccaagaactc aggcttcaag cgttctcgaa cccttgaggg gaagttaaag gtgtgagcac
1021 aannnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
1081 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nntcaccact ccaggacccc
1141 gagaagggac cagtccccac tttccagccg ttccagagga gcatatctgc tgacgatgat
1201 gacctgcaag aggtaaagct cctaatttct gtccctgagg ggttggggga tggaggaata
1261 tgagagacaa atatattttg gaccacatgt cagcaactgg aaatcatctt aactgttctt
1321 ggtctctttt acagtcatcc agacgtcccc agaggaaatc tctgtatgag aggttagaga
1381 gtagagataa ggctgggccc atttggtgga gttgatcgcc tgagtccttg ggaggtttgg
1441 gctgtaggag ctgggctata gagggaatat tgagtctcca cagggtctga ggggagaaag
1501 gtaaaacccc cctttgatct tcagtctgca tctccccagc tttgtgtctt ctagtgatcg
1561 acttcgagaa ctaggaccag atggagaaga ggcagagggc ccaggggctg gtgatggtcc
1621 ccctcgaagc tttgactggg gctatgaaga acgcagtggt gcccactcct cagcctcccc
1681 tccccgaagc cgcagccggg accgcagcca tgagaggaac cgggacagag accgagatcg
1741 ggagcgggat cgagaccggg atcgagacag agacagagag cgggacaggg atcgggatcg
1801 ggatcgagat cgagaccggg aacgggacag ggatcgggag cgggatcgag accgagaccg
1861 agaggggcct ttccgcagtg agtgattttg gctggaggtc aaggtgacct taactgaggt
1921 ttatgtgggt ctactaagtg aaatgtggca tgacctatgt gtggtactat gatttgtgct
1981 cccaaagggt cggattcatt ccctgaacgg cgtgccccta ggaaagggaa tactctctat
2041 gatgtatatg gagaagacat gacacccacc cttctccgtg gggccttctc tccttttgga
2101 aacatcattg acctctccat ggacccaccc agaaagtaag gatgacaaca gggcatgatg
2161 agaagtcctg ggagaatcct ggggtgtgag acctgaggga agaagctgcc ctccctgcag
2221 ctgcagccgc ctattatcac tgggtttggt tgggtccaga agagcccctt ggctctccac
2281 tgaccgtgtt ttctcttatc ccagctgtgc cttcgtcacc tatgaaaaga tggagtcagc
2341 agatcaggcc gccgctgagg ttggaacttc ccaaatctgt tcttcccatc gcttctgctg
2401 ttctcatgtg ttctcctgaa aatactagat gcctggaaga agttggttcc tcttgataaa
2461 gaaagcctct ccctattcac acagaaaaac tcacattctc agattccttt aattcagtct
2521 cctcctagga tagcaactcc tggaataact tctttggttt atctgtaatg ttttcctccc
2581 catcctctgc ctcccctctt ctgcttcagc tcaacgggac ccaggtggag tctgtacagc
2641 tcaaagacaa catagcccga aaacagccca tgctggatgc cgctactggc aagtctgtct
2701 ggggcgccct cggtaagaat gggattcttg cttgcccatg ctctgcccca cgggccattt
2761 gggtcagcct cagggtctgt tctatgatct cctttagacc ttaactgttc ctctcctccc
2821 tccctagctg tccagaacag ccctaagggt tgccaccggg acaagaggac ccagattgtc
2881 tacagtgatg acgtctacaa ggaaaacctt gtggatggct tctagggaac agagctggat
2941 tccttgtgcc tcatatgccc caatgctggt ctcagtaaaa cactgaggtg gaagcttnnn
3001 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
3061 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnngtc agcctcaggg tctgttctat
3121 gatctccttt agaccttaac tgttcctctc ctccctccct agctgtccag aacagcccta
3181 agggttgcca ccgggacaag aggacccaga ttgtctacag tgatgacgtc tacaaggaaa
3241 accttgtgga tggcttctag ggaacagagc tggattcctt gtgcctcata tgccccaatg
3301 ctggtctcag taaaacactg aggtggaagc tt
//