LOCUS AH001425 10263 bp DNA linear HUM 10-JUN-2016
DEFINITION Homo sapiens HLA-B-associated transcript 2 (BAT2) gene, complete
cds.
ACCESSION AH001425 M31293 M33510 M33511 M33512 M33518
VERSION AH001425.2
KEYWORDS class III gene; major histocompatibility complex; proline-rich
protein.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (sites)
AUTHORS Banerji,J., Sands,J., Strominger,J.L. and Spies,T.
TITLE A gene pair from the human major histocompatibility complex encodes
large proline-rich proteins with multiple repeated motifs and a
single ubiquitin-like domain
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 87 (6), 2374-2378 (1990)
PUBMED 2156268
REFERENCE 2 (bases 1 to 10263)
AUTHORS Banerji,J.
JOURNAL Unpublished
COMMENT On or before Jun 10, 2016 this sequence version replaced M33510.1,
M33511.1, M33512.1, M33518.1, AH001425.1.
FEATURES Location/Qualifiers
source 1..10263
/organism="Homo sapiens"
/mol_type="genomic DNA"
/db_xref="taxon:9606"
gap 337..436
/estimated_length=unknown
prim_transcript 590..624
/note="BAT2 mRNA"
gap 625..724
/estimated_length=unknown
prim_transcript <725..>3814
/note="BAT2 mRNA and introns"
intron <725..2183
/note="BAT2 intron A (no splice consensus); putative"
CDS join(2184..2296,3120..3296,3643..3814,4123..10089)
/note="HLA-B-associated transcript 2 (BAT2)"
/codon_start=1
/protein_id="AAA35586.1"
/translation="MSDRSGPTAKGKDGKKYSSLNLFDTYKGKSLEIQKPACCPSPWP
AESRESCHCPAYRPPANLPSLKAENKGNDPNVSLVPKDGTGWASKQEQSDPKSSDAST
AQPPESQPLPASQTPASNQPKRPPAAPENTPLVPSGVKSWAQASVTHGAHGDGGRASS
LLSRFSREEFPTLQAAGDQDKAAKERESAEQSSGPGPSLRPQNSTTWRDGGGRGPDEL
EGPDSKLHHGHDPRGGLQPSGPPQFPPYRGMMPPFMYPPYLPFPPPYGPQGPYRYPTP
DGPSRFPRVAGPRGSGPPMRLVEPVGRPSILKEDNLKEFDQLDQENDDGWAGAHEEVD
YTEKLKFSDEEDGRDSDEEGAEGHRDSQSASGEERPPEADGKKGNSPNSEPPTPKTAW
AETSRPPETEPGPPAPKPPLPPGDYPDRGGPPCKPPAPEDEDEAWRQRRKQSSSEISL
AVERARRRREEEERRMQEERRAACAEKLKRLDEKFGAPDKRLKAEPAAPPAAPSTPAP
PPAVPKELPAPPAPPPASAPTPETEPEEPAQAPPAQSTPTPGVAAAPTLVSGGGSTSS
TSSGSFEASPVEPQLPSKEGPEPPEEVPPPTTPPVPKVEPKGDGIGPTRQPPSQGLGY
PKYQKSLPPRFQRQQQEQLLKQQQQHQWQQHQQGSAPPTPVPPSPPQPVTLGAVPAPQ
APPPPPKALYPGALGRPPPMPPMNFDPRWMMIPPYVDPRLLQGRPPLEFYPPGVHPSG
LVPRERSDSLGLSSEPFDRHAPAMLRERGTPPVDPKLAWVGDVFTATPAEPRPLTSPL
RQAADEDDKGMRSETPPVPPPPPYLASYPGFPENGAPGPPISRFPLEEPGPRPLPWPP
GSDEVAKIQTPPPKKEPPKEETAQLTGPEAGRKLPASRSGAGPPPPRRESRTETRWGP
RPGSSRRGIPPEEPGAPPRRAGPIKKPPPPTKVEELPPKPLEQGDETPKPPKPDPLKI
TKGKLGGPKETPPNGNLSPAPRLRRDYSYERVGPTSCRGRGRGEYFARGRGFRGTYGG
RGRGGQANSAVTESFEEMMGVEVGQGDQTTLLLPEAAMPARHGARVQSMRKSPSGAGS
GAQKQAARPMRVIWLLQTRRLPHPRREHSPRSSRSPTTRSPTLHRAPARFTCPGVGES
SLPEGAISPGPRRREAPPQVCPGWSPPAKSLAPKKPPTGPLPPSKEPLKEKLIPGPLS
PVARGGSNGGSNVGMEDGERPRRRRHGRAQQQDKPPRFRRLKQERENAARGSEGKPSL
TLPASAPGPEEALTTVTVAPAPPRAAAKSPDLSNQNSDQANEEWETASESSDFTSERR
GDKEAPPPVLLTPKAVGTPGGGGGGAVPGISAMSRGDLSQRAKDLSKRSFSSQRPGME
RQNRRPGPGGKAGSSGSSSGGGGGGPGGRTGPGRGDKRSWPSPKNRSRPPEERPPGLP
LPPPPPSSSAVFRLDQVIHSNPAGIQQALAQLSSRQGSVTAPGGHPRHKPGPPQAPQG
PSPRPPTRYEPQRVNSGLSSDPHFEEPGPMVRGVGGTPRDSAGVSPFPPKRRERPPRK
PELLQEESLPPPHSSGFLGSKPEGPGPQAESRDTGTEALTPHIWNRLHTATSRKSYRP
TSMEPWMEPLSPFEDVAGTEMSQSDSGVDLSGDSQVSSGPCSQRSSPDGGLKGAAEGP
PKRPGGSSPLNAVPCEGPPGSEPPRRPPPAPHDGDRKELPREQPLPPGPIGTERSQRT
DRGTEPGPIRPSHRPGPPVQFGTSDKDSDLRLVVGDSLKAEKELTASVTEAIPVSRDW
ELLPSAAASAEPQSKNLDSGHCVPEPSSSGQRLYPEVFYGSAGPSSSQISGGSHGLSI
TSKQWRLRPGTPSLHPYRSQPLYLPPGPAPPSALLSGVALKGQFLDFSTMQATELGKL
PAGGVLYPPPSFLYSPAFCPSPLPDTSLLQVRQDLPSPSDFYSTPLQPGGQSGFLPSG
APAQQMLLPMVDSQLPVVNFGSLPPAPPPAPPPLSLLPVGPALQPPSLAVRPPPAPAT
RVLPSPARPFPASLGRAELHPVELKPFQDYQKLSSNLGGPGSSRTPPTGRSFSGLNSR
LKATPSTYSGVFRTQRVDLYQQASPPDALRWIPKPWERTGPPPREGPSRRAEEPGSRG
DKEPGLPPPR"
exon <2184..2296
/note="HLA-B-associated transcript 2 (BAT2), (first
expressed exon)"
/number=2
intron 2297..3119
/note="BAT2 intron B"
exon 3120..3296
/note="HLA-B-associated transcript 2"
/number=3
intron 3297..3642
/note="BAT2 intron C"
exon 3643..3814
/note="HLA-B-associated transcript 2"
/number=4
gap 3815..3914
/estimated_length=unknown
prim_transcript <3915..10263
/note="BAT2 mRNA and introns"
intron <3915..4122
/note="BAT2 intron D (no splice consensus); putative"
exon 4123..>10089
/note="HLA-B-associated transcript 2 (BAT2)"
/number=5
regulatory 10251..10256
/regulatory_class="polyA_signal_sequence"
BASE COUNT 2209 a 2928 c 2652 g 2141 t
ORIGIN Chromosome 6p21.3.
1 tctagaatcg ggtagtaaga gacaaaggag ggtaacagta ctgcatttca caaaatgaaa
61 cccattgtta agaaattaca aattcccaat aatttcaaat ataaaaattt attcatgaaa
121 attataggtt ataaaattaa atgtccgtct tagtcgatgg ttgcccatat tttgatgaac
181 gagtcattcc tagcctatct ttgttcaaat gatttgcata cttatgcaaa taggtagaac
241 tgcccgaaga atgcctacnt gcgtggtgcg gacgaaacgc ttgccgggsc ctttggattg
301 gtctgtctag ccacctcatt tgcatgacgt aatatannnn nnnnnnnnnn nnnnnnnnnn
361 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
421 nnnnnnnnnn nnnnnngtgc thhhnggggc ggcggttccg cggatgggcc gttagtcggg
481 stcagccgcg gagtgagnga gggagacgnn aggasgaacc cggccatccg ccgccatcct
541 cccccgcccc accgccatcc gtcccgggga cnnnnnnnnn nnnnnnnnnc ctaggcccgg
601 gtcccggatc cccgcgcacc cggcnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
661 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
721 nnnntctaga atcctgcttt tatcccagca tctttgcttt ctatgttgct cagtcgccct
781 atgtctgctt tttcattttt cctgttcctc gtctcctttc tcccccaacc ccgtttttct
841 tcttgggcct ctgcccctta cttcgttgtc tacatccttt ttttttttgc cattcctgtt
901 tccatatatt ttccacctgc tttcgtattc attattttct gttagttttg gactattcgc
961 tacatgactc ttgtattcgt tttcccttca tatatttatc ttcacagatt ggcctcctca
1021 aacacctacg aagcaacatc catcttatgt gtagcttgtc ataaagttct ttctccccaa
1081 ttttagcttt cattctgggc ctgtctggat ttccctgctt tcttccccac tatttctcat
1141 ctctttacac tgttcccgac cataaacgaa tgcctggtca ctctggaatg gactgagaga
1201 cctgtcgtcc ggcttgctta gggagctgga ggtatcgagt aaagaaacac tggtgatgga
1261 catttttaat caggatagga aaacgaagat ggctctgcct tggccctctg ttttctggcc
1321 catggttaca gggtgctaag gtggctccat aatgcttttt ctcagttctt catatggtaa
1381 aacagtattt catctggagg cgattttttc caggagccaa tacaggagca agtttaccaa
1441 aagatgggat atttcaaata cttgaggttc ctatagcctg ggagtatgta cagccctagt
1501 tgttctatga ggatttctct ggtaccaacc cccattccng ctgagcaagc tcataaaatc
1561 cttaaactcc cagcatacct tnctgcaaac cttcccagat ggacacgagg ctgctgggct
1621 gggagctggg gtacagggcc ctgggggcat gattagggag cttgtgtcca ataaacaggg
1681 aatctaaagt gttgtttctt cttctctgat ggaattgtat gcttcttttt tagttttctc
1741 ttagcttgaa tttgtcctgt tgtaagtctc tgaaacgatt ttggtggaga gagaagagat
1801 tattacttgt agggaattac tctttngtag acaggcacaa agggcagagt gtttatacta
1861 ggaggatgct ggatttttac ttagatttcc ttgtaacaaa ggtcgtctgg ggccaaggag
1921 ggaacatggc atttgagcta tgagggagct aagtagatca tggttggact ttaagaagag
1981 tgggcagttt acatagactg gaggaaaaga caccagaggg actcatatct gagtccctaa
2041 tgataatgca atggagtttt taagtttctg ttatggtctg tacagggaca gagactgaga
2101 cacttgcgtc tggcccacag gctctggcac gttttggggg aggtgcctgc aggacccaac
2161 atactcaatg agcttccagc gcaatgtccg atcgctcggg gccgactgcc aagggaaagg
2221 atggaaagaa gtattcctcg ctcaacctgt ttgatacgta taagggcaag tccttagaga
2281 tccagaaacc cgcctggtga gagtcctgca aagatgcttc tgatggttga aaagctaggc
2341 atgcatgggg catacgtttt agagctctaa aggaagtggc tgtagtagaa ataccaaaag
2401 actagaggag atttcccaac ttacactggg tcctttaaag ggggtgtggg ctctgggtga
2461 acaccagtta tcctcctaca aaggcgtgtc tgtggttccc tgtctttgga cacgtaagaa
2521 ttggaggaaa taaatgtgga tttgggaaac tttgaggcca gcttgcttct tgcaggctca
2581 tgatcaacca atctcacata aaagtattga atgttacata tctcagcctt cttgataggg
2641 atttactaga tttttttttt tttttttttt tttttttttt gagaccaagt ttagctcctg
2701 ttgcccaggc tggagtgcaa tggtgtgatc ttgacttacc acaacctcca ccgcctgggt
2761 ttaagcgatt atcctgcctc agcctcctga gtagctggga ttacaggcat gcaccccggc
2821 taattttgtg tttttagtag agacagggtt tctccatttt ggtcaagctg gtcttgaact
2881 cctgacctca ggtgatccgc ctccctcggc ctgccaaagt gctgggattg caaagtgtga
2941 gccaccacaa tcagcgcgat ttcagagatt attaaggcag gggaaggaat cccttctaag
3001 agaagtttgg aggaagtagg taataaaata ttcaacatgt ataaatgtgt cccaggatag
3061 gaggccatca gatctcccac atgaggcatt ttcgaccctc tctccgtctt gttctccagt
3121 tgcccctcgc catggcctgc agagtctcgg gaaagttgcc attgcccggc gtatcgacct
3181 ccagccaacc ttccaagcct gaaagccgag aacaaaggca atgaccccaa tgtctcacta
3241 gtgccaaaag acggaacagg atgggcaagc aaacaggagc agtccgaccc caagaggtag
3301 acagaggctt gggggaccta gagtgatggg tattttaact tgaacttcag ggagcattgg
3361 ggcttggttt agtccagcca cgtctgaaga gacgaagagg tccctttctt acctattgca
3421 ggttccttgt taaatgacta aggaatggta ctaaacttta gctttttgtc ttggagagag
3481 agcatgaaaa aatagacaac aggtacaagg atgacaaaat taatttgtcc ttatatttgt
3541 aaatggtagc aatgggcatg atttcagtcc tgagtctcca ccagttggag aagtcaggga
3601 ggcatctcag gtgtgaataa ccttcccatt ctgtcccctc agttccgatg cctcaaccgc
3661 tcagccgccg gaatcgcagc cactgccggc ttcacagacg cctgcctcca accagccgaa
3721 acgaccccca gcagcccccg agaacactcc tttggttcca agcggggtaa agtcctgggc
3781 acaagccagc gtcacccatg gagcacatgg agatnnnnnn nnnnnnnnnn nnnnnnnnnn
3841 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
3901 nnnnnnnnnn nnnnagctaa tttgtgtgtg tttagtagag atgggttcac atgttggcag
3961 atggtctcga tctcttgacc tctgtgatcc gcccgcctca gccggtccca gagtgctggg
4021 attacaggcg tgagccaccg cgcccagcca gagtcttcca cttttatnag catgtcctca
4081 ggaaatgtct tctgtctcct gttctgcatc cccatcctaa taggtggaag ggcatcaagc
4141 ctactgtcac gattctctcg agaggaattt ccgaccctgc aggcggctgg cgaccaggac
4201 aaggctgcca aggaaaggga gtctgccgaa cagtcgtctg ggcccggacc aagcctccgc
4261 ccccaaaatt ctacaacttg gagggacgga ggtgggcgtg gccctgatga gctggagggc
4321 ccggactcca aacttcatca tggtcatgat ccccggggtg ggctacagcc ttcaggccca
4381 ccccagttcc ctccctaccg cggaatgatg ccgcctttca tgtatccccc atatctcccg
4441 ttccctccgc cctatggacc ccaggggcct taccgatacc ccactcctga tgggcccagc
4501 cgttttcccc gtgtggcggg cccccgaggc tcagggccac caatgcgctt agtagagcct
4561 gtgggtcgtc cctctattct caaagaggat aatctcaaag agtttgatca gttggatcag
4621 gagaatgatg atggttgggc aggggcccat gaagaggttg actacactga aaagctcaag
4681 ttcagcgatg aggaagatgg gcgagactct gatgaggagg gagctgaggg ccacagggat
4741 tcccaatcag cttctggtga ggaacggccc cctgaagcag atggcaaaaa gggcaactcc
4801 cccaacagcg aaccgcccac tcctaagacg gcctgggcag aaacctctcg gcctccagag
4861 acagagccgg gacctcctgc cccaaagcct cccctacccc ctggggacta cccagatcgt
4921 gggggtcctc cctgcaagcc cccagcacct gaagatgagg atgaggcatg gcggcagcga
4981 cgaaagcagt cgtcatctga gatttccctg gcagtggagc gggcccggcg acggcgagaa
5041 gaagaggagc ggcgcatgca agaagagcgc cgggcagcct gtgctgagaa gctcaagcga
5101 ctcgatgaaa agtttggggc acctgacaag cggctcaaag cagagcctgc tgccccacct
5161 gctgcccctt ctaccccagc cccaccacct gcagtcccta aagaactccc tgcacctcca
5221 gctccacctc cagcatcagc cccaacacca gagacagaac ctgaagagcc agcacaggcc
5281 cctcctgccc aatctactcc tactccaggt gtggctgcgg ctcccactct ggtgagtggt
5341 ggtggcagta ccagtagcac cagcagtggc agcttcgaag ccagcccagt ggaaccacaa
5401 ctgccctcaa aagagggtcc tgaaccacca gaagaggttc ctcctcctac cacaccccca
5461 gttccaaagg tggaacccaa gggtgatggg attggtccca cccgccagcc ccctagtcag
5521 ggcttgggct accccaaata tcagaagtcg ttgcctcctc gtttccagcg gcagcagcag
5581 gagcagctcc tgaagcagca gcagcagcac cagtggcagc agcatcaaca gggctctgcc
5641 cctcctaccc cagtgccccc atcaccacca cagcctgtga ccctgggggc tgtgccagct
5701 ccacaggctc cacccccgcc ccccaaggcc ctgtacccag gtgctctggg ccggccccca
5761 cccatgcccc caatgaactt tgatccccga tggatgatga ttcctcctta tgtggacccc
5821 cggctcctcc agggtcgtcc ccctctagag ttctaccctc ctggtgtgca tccctctggc
5881 ctagttcccc gagagcgttc agacagtctg gggctcagct cagagccatt tgaccgtcat
5941 gcacctgcta tgttacggga acggggcact ccaccggtgg atccaaagtt ggcctgggta
6001 ggagatgtct tcaccgccac acccgctgaa ccccgcccac ttacctcacc tctgcgccag
6061 gctgcggatg aggatgacaa ggggatgagg agcgagactc ctccagtacc tcccccacca
6121 ccctatctgg ccagttatcc aggctttcct gagaatggag cccctgggcc cccaatctct
6181 cgctttcctc tggaggaacc agggccccgt ccactcccct ggcccccagg cagtgatgaa
6241 gtggccaaga tacaaactcc accacccaag aaggagcccc ctaaggagga gactgcacag
6301 ctgacggggc cagaagcagg ccgaaagctg cccgcgagtc ggagtggagc aggcccccca
6361 ccaccacgca gagagagtcg cacagagacc cgctggggcc ctcgtccagg gagcagtcgt
6421 cgtggaatcc ctccagagga gccaggggcc ccaccccgcc gggctgggcc tataaagaaa
6481 cctccaccac ctacaaaagt agaagagctg cctcccaagc ccctcgaaca gggggatgaa
6541 acccccaaac ccccaaagcc agacccactc aagataacca aggggaagct agggggcccc
6601 aaggagaccc cacccaatgg aaatctttcc cctgccccaa ggcttcggag ggactattcg
6661 tatgaaagag tgggtcctac ctcttgccgg ggtcggggcc gaggcgagta ttttgccaga
6721 gggaggggtt ttcgggggac ctatggggga cgagggcggg gaggccaagc gaattccgca
6781 gttaccgaga gtttcgagga gatgatgggc gtggaggtgg gacaggggga ccaaaccacc
6841 ctcctgctcc ccgaggccgc catgccagcg agacacggag cgagggttca gagtatgagg
6901 aaatccccaa gcggtgccgg cagcggggct cagaaacagg cagcgagacc catgagagtg
6961 atctggctcc ttcagacaag gaggctccca cacccaagga gggaacactc acccaggtcc
7021 tctcgctccc ccaccaccag gagccccacc cttcaccgag cgccagcccg cttcacgtgc
7081 ccgggggtcg gcgagtcttc actcccagag ggtgccatct cgccggggcc gaggaggagg
7141 gaggcccctc ctcaagtttg cccaggctgg agccctccag ccaagtctct ggctcccaag
7201 aaacctccca caggcccttt gccaccaagt aaggagcctt tgaaagagaa gttgatccca
7261 gggcctctgt cccctgtggc gcgcggaggc agcaatggag gtagcaatgt gggcatggaa
7321 gatggggagc gaccccgaag gaggcgacat gggagggctc agcagcagga taaaccgcct
7381 cgtttccgga ggctgaagca ggaacgggag aatgccgcaa gggggtctga gggcaagccc
7441 tccctaaccc ttccagcctc cgctcctgga cctgaggagg ccctcacaac agtcacagtg
7501 gccccagcac ctccgcgggc agctgccaag tctcctgatc tgtcaaacca gaactcagac
7561 caagccaatg aggaatggga gactgcatca gagagcagtg acttcaccag tgagcgccga
7621 ggggacaaag aggcaccccc accagtactg ctgacaccca aggctgtggg aactcctggg
7681 ggaggtggag gtggagccgt accaggtatt tcagccatgt cccgcggaga tctgagccag
7741 agagccaagg atttgagtaa acggagcttc tcaagtcagc ggccaggcat ggaacggcag
7801 aatcggcgcc ctggcccagg gggcaaggct ggcagcagtg gcagcagcag tggaggaggc
7861 ggtgggggtc ctggaggaag gaccgggcca ggacgaggcg acaagaggag ctggccctct
7921 cccaagaacc gaagtcgtcc tccagaggag cgtcccccgg ggcttcccct gcctccccca
7981 cctcccagca gttctgctgt cttccgcctg gaccaagtta tccacagcaa ccctgctggc
8041 atccaacagg ctctggccca gcttagtagc cgtcaaggga gtgtaactgc accagggggt
8101 catccaaggc acaagcctgg gcctccccaa gcccctcagg gcccctctcc taggccccca
8161 acccgatacg agccccagag ggtcaacagc ggcctcagtt ctgaccccca ctttgaggag
8221 ccggggccaa tggtgagagg ggtgggtggg actcctcggg actctgccgg ggttagtccc
8281 tttcccccta aacgtcggga gcggcctccc agaaaaccag agctgctaca ggaggaatct
8341 ttgccacctc ctcatagctc tggattcttg ggctctaagc ctgagggccc aggccctcag
8401 gcagagtcca gagatacagg cacagaggcc ctgacccctc acatctggaa ccgtttacat
8461 actgccacta gccgaaagag ttaccggccc acgtccatgg agccttggat ggagcccctg
8521 agtccttttg aggatgtggc tggcacagaa atgagtcagt ctgacagtgg ggtggacctg
8581 agtggggatt ctcaggtgtc atcaggtccc tgcagccagc gaagttcccc tgatggagga
8641 ctcaaggggg cagcagaggg accccccaag aggcctggag gctcctcacc cctgaatgct
8701 gttccttgtg agggtccacc tggctctgaa cctcctagga gaccaccacc tgccccccac
8761 gatggggaca gaaaggagct gccccgggag cagcctctgc cccctggccc cattggcaca
8821 gaacgatcac agcgtacaga ccgaggcaca gagcctggcc ccattcggcc atcccatcga
8881 cctggtcccc cagtccagtt tggcactagt gacaaggact cagacttacg cctagtggta
8941 ggagacagct tgaaagcaga gaaggagcta acagcatcag tcactgaggc cattcctgta
9001 tcacgagact gggagctgct tcccagtgct gctgcctctg ctgagccaca atccaagaac
9061 ctggattctg ggcactgtgt cccggagccc agctcctcag gccagcgcct gtatcctgag
9121 gttttctatg gcagtgctgg gccttccagt tctcagatct ctggggggag ccatggactc
9181 tcaattacat ccaaacagtg gaggcttcgc cctgggacac cctcactgca cccttacaga
9241 tcacagcccc tatacctacc cccgggccca gcccctccct cagcactgct ctctggggta
9301 gctctcaagg gccagtttct ggatttctcc acaatgcaag ctacagagct ggggaagttg
9361 ccggctggag gagttctcta ccctccacct tccttcctct actctccggc tttctgcccc
9421 agtcctttgc ctgacacatc gttgcttcag gtacgccagg atctgccatc cccttcggat
9481 ttttattcta ctcctctgca gcctggtggc caaagtggct ttctcccttc aggggctcct
9541 gcccagcaga tgcttctacc catggtagac tcacagctgc ctgtggtgaa ctttggctcc
9601 ctgccgccag caccacctcc tgccccacct cccctttctc tgttacctgt gggccctgct
9661 ctgcagcccc ccagcctggc tgtgcggccc ccacctgctc ctgctactcg ggtgctgcct
9721 tcacctgcca ggcccttccc cgctagcttg gggcgagcag agctgcatcc agtggaacta
9781 aagccgttcc aggattatca aaaactgagc agcaaccttg ggggacctgg atcatcacgg
9841 actcccccaa ctggaaggtc cttctctggc ctcaattccc gtctcaaggc cacgccttcc
9901 acctacagtg gagtcttccg cacccagcgc gtcgaccttt accagcaggc ctccccacca
9961 gatgccctgc gctggatacc taagccttgg gagcggacag ggccgccacc tcgagaaggg
10021 ccctcccgac gggcagagga gcctgggtcc cgaggggaca aggagcctgg gttgccccca
10081 ccccgctgag ggagttcctc ttgcccccta cccccggggc ttgtatatag attataaata
10141 tataaggggg aaaggggtgg gcggggaggg gttgtggggc tggggcctca cttcccctcc
10201 tcccccttcc cctggtcccc tgtccctggg gctgtttgtt aaaaaagagt aataaaagga
10261 ttt
//
LOCUS HUMBAT2A 6704 bp mRNA linear HUM 27-APR-1993
DEFINITION Human HLA-B-associated transcript 2 (BAT2) mRNA, complete cds.
ACCESSION M33509 M31293
VERSION M33509.1
KEYWORDS class III gene; major histocompatibility complex; proline-rich
protein.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 6704)
AUTHORS Banerji,J., Sands,J., Strominger,J.L. and Spies,T.
TITLE A gene pair from the human major histocompatibility complex encodes
large proline-rich proteins with multiple repeated motifs and a
single ubiquitin-like domain
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 87 (6), 2374-2378 (1990)
PUBMED 2156268
COMMENT Original source text: Human T-cell line HPB-All, cDNA to mRNA.
Draft entry and computer-readable sequence for [1] kindly submitted
by J.Banerji, 11-JAN-1990, for release after publication.
FEATURES Location/Qualifiers
source 1..6704
/db_xref="H-InvDB:HIT000195518_06"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
mRNA 1..6704
/product="BAT2 mRNA"
CDS 102..6530
/note="HLA-B-associated transcript 2 (BAT2)"
/codon_start=1
/protein_id="AAA35585.1"
/translation="MSDRSGPTAKGKDGKKYSSLNLFDTYKGKSLEIQKPACCPSPWP
AESRESCHCPAYRPPANLPSLKAENKGNDPNVSLVPKDGTGWASKQEQSDPKSSDAST
AQPPESQPLPASQTPASNQPKRPPAAPENTPLVPSGVKSWAQASVTHGAHGDGGRASS
LLSRFSREEFPTLQAAGDQDKAAKERESAEQSSGPGPSLRPQNSTTWRDGGGRGPDEL
EGPDSKLHHGHDPRGGLQPSGPPQFPPYRGMMPPFMYPPYLPFPPPYGPQGPYRYPTP
DGPSRFPRVAGPRGSGPPMRLVEPVGRPSILKEDNLKEFDQLDQENDDGWAGAHEEVD
YTEKLKFSDEEDGRDSDEEGAEGHRDSQSASGEERPPEADGKKGNSPNSEPPTPKTAW
AETSRPPETEPGPPAPKPPLPPGDYPDRGGPPCKPPAPEDEDEAWRQRRKQSSSEISL
AVERARRRREEEERRMQEERRAACAEKLKRLDEKFGAPDKRLKAEPAAPPAAPSTPAP
PPAVPKELPAPPAPPPASAPTPETEPEEPAQAPPAQSTPTPGVAAAPTLVSGGGSTSS
TSSGSFEASPVEPQLPSKEGPEPPEEVPPPTTPPVPKVEPKGDGIGPTRQPPSQGLGY
PKYQKSLPPRFQRQQQEQLLKQQQQHQWQQHQQGSAPPTPVPPSPPQPVTLGAVPAPQ
APPPPPKALYPGALGRPPPMPPMNFDPRWMMIPPYVDPRLLQGRPPLEFYPPGVHPSG
LVPRERSDSLGLSSEPFDRHAPAMLRERGTPPVDPKLAWVGDVFTATPAEPRPLTSPL
RQAADEDDKGMRSETPPVPPPPPYLASYPGFPENGAPGPPISRFPLEEPGPRPLPWPP
GSDEVAKIQTPPPKKEPPKEETAQLTGPEAGRKLPASRSGAGPPPPRRESRTETRWGP
RPGSSRRGIPPEEPGAPPRRAGPIKKPPPPTKVEELPPKPLEQGDETPKPPKPDPLKI
TKGKLGGPKETPPNGNLSPAPRLRRDYSYERVGPTSCRGRGRGEYFARGRGFRGTYGG
RGRGGQANSAVTESFEEMMGVEVGQGDQTTLLLPEAAMPARHGARVQSMRKSPSGAGS
GAQKQAARPMRVIWLLQTRRLPHPRREHSPRSSRSPTTRSPTLHRAPARFTCPGVGES
SLPEGAISPGPRRREAPPQVCPGWSPPAKSLAPKKPPTGPLPPSKEPLKEKLIPGPLS
PVARGGSNGGSNVGMEDGERPRRRRHGRAQQQDKPPRFRRLKQERENAARGSEGKPSL
TLPASAPGPEEALTTVTVAPAPPRAAAKSPDLSNQNSDQANEEWETASESSDFTSERR
GDKEAPPPVLLTPKAVGTPGGGGGGAVPGISAMSRGDLSQRAKDLSKRSFSSQRPGME
RQNRRPGPGGKAGSSGSSSGGGGGGPGGRTGPGRGDKRSWPSPKNRSRPPEERPPGLP
LPPPPPSSSAVFRLDQVIHSNPAGIQQALAQLSSRQGSVTAPGGHPRHKPGPPQAPQG
PSPRPPTRYEPQRVNSGLSSDPHFEEPGPMVRGVGGTPRDSAGVSPFPPKRRERPPRK
PELLQEESLPPPHSSGFLGSKPEGPGPQAESRDTGTEALTPHIWNRLHTATSRKSYRP
TSMEPWMEPLSPFEDVAGTEMSQSDSGVDLSGDSQVSSGPCSQRSSPDGGLKGAAEGP
PKRPGGSSPLNAVPCEGPPGSEPPRRPPPAPHDGDRKELPREQPLPPGPIGTERSQRT
DRGTEPGPIRPSHRPGPPVQFGTSDKDSDLRLVVGDSLKAEKELTASVTEAIPVSRDW
ELLPSAAASAEPQSKNLDSGHCVPEPSSSGQRLYPEVFYGSAGPSSSQISGGSHGLSI
TSKQWRLRPGTPSLHPYRSQPLYLPPGPAPPSALLSGVALKGQFLDFSTMQATELGKL
PAGGVLYPPPSFLYSPAFCPSPLPDTSLLQVRQDLPSPSDFYSTPLQPGGQSGFLPSG
APAQQMLLPMVDSQLPVVNFGSLPPAPPPAPPPLSLLPVGPALQPPSLAVRPPPAPAT
RVLPSPARPFPASLGRAELHPVELKPFQDYQKLSSNLGGPGSSRTPPTGRSFSGLNSR
LKATPSTYSGVFRTQRVDLYQQASPPDALRWIPKPWERTGPPPREGPSRRAEEPGSRG
DKEPGLPPPR"
regulatory 6692..6697
/regulatory_class="polyA_signal_sequence"
BASE COUNT 1435 a 2224 c 1897 g 1148 t
ORIGIN Chromosome 6p21.3.
1 cctaggcccg ggtcccggat ccccgcgcac ccggccaggc tctggcacgt tttgggggag
61 gtgcctgcag gacccaacat actcaatgag cttccagcgc aatgtccgat cgctcggggc
121 cgactgccaa gggaaaggat ggaaagaagt attcctcgct caacctgttt gatacgtata
181 agggcaagtc cttagagatc cagaaacccg cctgttgccc ctcgccatgg cctgcagagt
241 ctcgggaaag ttgccattgc ccggcgtatc gacctccagc caaccttcca agcctgaaag
301 ccgagaacaa aggcaatgac cccaatgtct cactagtgcc aaaagacgga acaggatggg
361 caagcaaaca ggagcagtcc gaccccaaga gttccgatgc ctcaaccgct cagccgccgg
421 aatcgcagcc actgccggct tcacagacgc ctgcctccaa ccagccgaaa cgacccccag
481 cagcccccga gaacactcct ttggttccaa gcggggtaaa gtcctgggca caagccagcg
541 tcacccatgg agcacatgga gatggtggaa gggcatcaag cctactgtca cgattctctc
601 gagaggaatt tccgaccctg caggcggctg gcgaccagga caaggctgcc aaggaaaggg
661 agtctgccga acagtcgtct gggcccggac caagcctccg cccccaaaat tctacaactt
721 ggagggacgg aggtgggcgt ggccctgatg agctggaggg cccggactcc aaacttcatc
781 atggtcatga tccccggggt gggctacagc cttcaggccc accccagttc cctccctacc
841 gcggaatgat gccgcctttc atgtatcccc catatctccc gttccctccg ccctatggac
901 cccaggggcc ttaccgatac cccactcctg atgggcccag ccgttttccc cgtgtggcgg
961 gcccccgagg ctcagggcca ccaatgcgct tagtagagcc tgtgggtcgt ccctctattc
1021 tcaaagagga taatctcaaa gagtttgatc agttggatca ggagaatgat gatggttggg
1081 caggggccca tgaagaggtt gactacactg aaaagctcaa gttcagcgat gaggaagatg
1141 ggcgagactc tgatgaggag ggagctgagg gccacaggga ttcccaatca gcttctggtg
1201 aggaacggcc ccctgaagca gatggcaaaa agggcaactc ccccaacagc gaaccgccca
1261 ctcctaagac ggcctgggca gaaacctctc ggcctccaga gacagagccg ggacctcctg
1321 ccccaaagcc tcccctaccc cctggggact acccagatcg tgggggtcct ccctgcaagc
1381 ccccagcacc tgaagatgag gatgaggcat ggcggcagcg acgaaagcag tcgtcatctg
1441 agatttccct ggcagtggag cgggcccggc gacggcgaga agaagaggag cggcgcatgc
1501 aagaagagcg ccgggcagcc tgtgctgaga agctcaagcg actcgatgaa aagtttgggg
1561 cacctgacaa gcggctcaaa gcagagcctg ctgccccacc tgctgcccct tctaccccag
1621 ccccaccacc tgcagtccct aaagaactcc ctgcacctcc agctccacct ccagcatcag
1681 ccccaacacc agagacagaa cctgaagagc cagcacaggc ccctcctgcc caatctactc
1741 ctactccagg tgtggctgcg gctcccactc tggtgagtgg tggtggcagt accagtagca
1801 ccagcagtgg cagcttcgaa gccagcccag tggaaccaca actgccctca aaagagggtc
1861 ctgaaccacc agaagaggtt cctcctccta ccacaccccc agttccaaag gtggaaccca
1921 agggtgatgg gattggtccc acccgccagc cccctagtca gggcttgggc taccccaaat
1981 atcagaagtc gttgcctcct cgtttccagc ggcagcagca ggagcagctc ctgaagcagc
2041 agcagcagca ccagtggcag cagcatcaac agggctctgc ccctcctacc ccagtgcccc
2101 catcaccacc acagcctgtg accctggggg ctgtgccagc tccacaggct ccacccccgc
2161 cccccaaggc cctgtaccca ggtgctctgg gccggccccc acccatgccc ccaatgaact
2221 ttgatccccg atggatgatg attcctcctt atgtggaccc ccggctcctc cagggtcgtc
2281 cccctctaga gttctaccct cctggtgtgc atccctctgg cctagttccc cgagagcgtt
2341 cagacagtct ggggctcagc tcagagccat ttgaccgtca tgcacctgct atgttacggg
2401 aacggggcac tccaccggtg gatccaaagt tggcctgggt aggagatgtc ttcaccgcca
2461 cacccgctga accccgccca cttacctcac ctctgcgcca ggctgcggat gaggatgaca
2521 aggggatgag gagcgagact cctccagtac ctcccccacc accctatctg gccagttatc
2581 caggctttcc tgagaatgga gcccctgggc ccccaatctc tcgctttcct ctggaggaac
2641 cagggccccg tccactcccc tggcccccag gcagtgatga agtggccaag atacaaactc
2701 caccacccaa gaaggagccc cctaaggagg agactgcaca gctgacgggg ccagaagcag
2761 gccgaaagct gcccgcgagt cggagtggag caggcccccc accaccacgc agagagagtc
2821 gcacagagac ccgctggggc cctcgtccag ggagcagtcg tcgtggaatc cctccagagg
2881 agccaggggc cccaccccgc cgggctgggc ctataaagaa acctccacca cctacaaaag
2941 tagaagagct gcctcccaag cccctcgaac agggggatga aacccccaaa cccccaaagc
3001 cagacccact caagataacc aaggggaagc tagggggccc caaggagacc ccacccaatg
3061 gaaatctttc ccctgcccca aggcttcgga gggactattc gtatgaaaga gtgggtccta
3121 cctcttgccg gggtcggggc cgaggcgagt attttgccag agggaggggt tttcggggga
3181 cctatggggg acgagggcgg ggaggccaag cgaattccgc agttaccgag agtttcgagg
3241 agatgatggg cgtggaggtg ggacaggggg accaaaccac cctcctgctc cccgaggccg
3301 ccatgccagc gagacacgga gcgagggttc agagtatgag gaaatcccca agcggtgccg
3361 gcagcggggc tcagaaacag gcagcgagac ccatgagagt gatctggctc cttcagacaa
3421 ggaggctccc acacccaagg agggaacact cacccaggtc ctctcgctcc cccaccacca
3481 ggagccccac ccttcaccga gcgccagccc gcttcacgtg cccgggggtc ggcgagtctt
3541 cactcccaga gggtgccatc tcgccggggc cgaggaggag ggaggcccct cctcaagttt
3601 gcccaggctg gagccctcca gccaagtctc tggctcccaa gaaacctccc acaggccctt
3661 tgccaccaag taaggagcct ttgaaagaga agttgatccc agggcctctg tcccctgtgg
3721 cgcgcggagg cagcaatgga ggtagcaatg tgggcatgga agatggggag cgaccccgaa
3781 ggaggcgaca tgggagggct cagcagcagg ataaaccgcc tcgtttccgg aggctgaagc
3841 aggaacggga gaatgccgca agggggtctg agggcaagcc ctccctaacc cttccagcct
3901 ccgctcctgg acctgaggag gccctcacaa cagtcacagt ggccccagca cctccgcggg
3961 cagctgccaa gtctcctgat ctgtcaaacc agaactcaga ccaagccaat gaggaatggg
4021 agactgcatc agagagcagt gacttcacca gtgagcgccg aggggacaaa gaggcacccc
4081 caccagtact gctgacaccc aaggctgtgg gaactcctgg gggaggtgga ggtggagccg
4141 taccaggtat ttcagccatg tcccgcggag atctgagcca gagagccaag gatttgagta
4201 aacggagctt ctcaagtcag cggccaggca tggaacggca gaatcggcgc cctggcccag
4261 ggggcaaggc tggcagcagt ggcagcagca gtggaggagg cggtgggggt cctggaggaa
4321 ggaccgggcc aggacgaggc gacaagagga gctggccctc tcccaagaac cgaagtcgtc
4381 ctccagagga gcgtcccccg gggcttcccc tgcctccccc acctcccagc agttctgctg
4441 tcttccgcct ggaccaagtt atccacagca accctgctgg catccaacag gctctggccc
4501 agcttagtag ccgtcaaggg agtgtaactg caccaggggg tcatccaagg cacaagcctg
4561 ggcctcccca agcccctcag ggcccctctc ctaggccccc aacccgatac gagccccaga
4621 gggtcaacag cggcctcagt tctgaccccc actttgagga gccggggcca atggtgagag
4681 gggtgggtgg gactcctcgg gactctgccg gggttagtcc ctttccccct aaacgtcggg
4741 agcggcctcc cagaaaacca gagctgctac aggaggaatc tttgccacct cctcatagct
4801 ctggattctt gggctctaag cctgagggcc caggccctca ggcagagtcc agagatacag
4861 gcacagaggc cctgacccct cacatctgga accgtttaca tactgccact agccgaaaga
4921 gttaccggcc cacgtccatg gagccttgga tggagcccct gagtcctttt gaggatgtgg
4981 ctggcacaga aatgagtcag tctgacagtg gggtggacct gagtggggat tctcaggtgt
5041 catcaggtcc ctgcagccag cgaagttccc ctgatggagg actcaagggg gcagcagagg
5101 gaccccccaa gaggcctgga ggctcctcac ccctgaatgc tgttccttgt gagggtccac
5161 ctggctctga acctcctagg agaccaccac ctgcccccca cgatggggac agaaaggagc
5221 tgccccggga gcagcctctg ccccctggcc ccattggcac agaacgatca cagcgtacag
5281 accgaggcac agagcctggc cccattcggc catcccatcg acctggtccc ccagtccagt
5341 ttggcactag tgacaaggac tcagacttac gcctagtggt aggagacagc ttgaaagcag
5401 agaaggagct aacagcatca gtcactgagg ccattcctgt atcacgagac tgggagctgc
5461 ttcccagtgc tgctgcctct gctgagccac aatccaagaa cctggattct gggcactgtg
5521 tcccggagcc cagctcctca ggccagcgcc tgtatcctga ggttttctat ggcagtgctg
5581 ggccttccag ttctcagatc tctgggggga gccatggact ctcaattaca tccaaacagt
5641 ggaggcttcg ccctgggaca ccctcactgc acccttacag atcacagccc ctatacctac
5701 ccccgggccc agcccctccc tcagcactgc tctctggggt agctctcaag ggccagtttc
5761 tggatttctc cacaatgcaa gctacagagc tggggaagtt gccggctgga ggagttctct
5821 accctccacc ttccttcctc tactctccgg ctttctgccc cagtcctttg cctgacacat
5881 cgttgcttca ggtacgccag gatctgccat ccccttcgga tttttattct actcctctgc
5941 agcctggtgg ccaaagtggc tttctccctt caggggctcc tgcccagcag atgcttctac
6001 ccatggtaga ctcacagctg cctgtggtga actttggctc cctgccgcca gcaccacctc
6061 ctgccccacc tcccctttct ctgttacctg tgggccctgc tctgcagccc cccagcctgg
6121 ctgtgcggcc cccacctgct cctgctactc gggtgctgcc ttcacctgcc aggcccttcc
6181 ccgctagctt ggggcgagca gagctgcatc cagtggaact aaagccgttc caggattatc
6241 aaaaactgag cagcaacctt gggggacctg gatcatcacg gactccccca actggaaggt
6301 ccttctctgg cctcaattcc cgtctcaagg ccacgccttc cacctacagt ggagtcttcc
6361 gcacccagcg cgtcgacctt taccagcagg cctccccacc agatgccctg cgctggatac
6421 ctaagccttg ggagcggaca gggccgccac ctcgagaagg gccctcccga cgggcagagg
6481 agcctgggtc ccgaggggac aaggagcctg ggttgccccc accccgctga gggagttcct
6541 cttgccccct acccccgggg cttgtatata gattataaat atataagggg gaaaggggtg
6601 ggcggggagg ggttgtgggg ctggggcctc acttcccctc ctcccccttc ccctggtccc
6661 ctgtccctgg ggctgtttgt taaaaaagag taataaaagg attt
//