LOCUS HUMGT197A 1527 bp mRNA linear HUM 05-OCT-1995 DEFINITION Homo sapiens GT197 partial ORF mRNA, 3' end of cds. ACCESSION L38932 VERSION L38932.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1527) AUTHORS Rommens,J.M., Durocher,F., McArthur,J., Tonin,P., Leblanc,J.-F., Allen,T., Samson,C., Ferri,L., Narod,S., Morgan,K. and Simard,J. TITLE Generation of a transcription map at the HSD17B locus centromeric to BRCA1 at 17q21 JOURNAL Genomics 28 (3), 530-542 (1995) PUBMED 7490091 COMMENT Original source text: Homo sapiens (clone: GT197.3) (tissue library: Clontech #HL1061b) breast cDNA to mRNA. FEATURES Location/Qualifiers source 1..1527 /db_xref="H-InvDB:HIT000193409" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /map="17q21" /clone="GT197.3" /tissue_type="breast" /tissue_lib="Clontech #HL1061b" /note="Cloning Vector: Lambda gt11" mRNA <1..1527 /product="GT197 messenger RNA" /note="5'-end probably incomplete: clone is 1.5 kbp; however, it detects a 2.4 kbp mRNA by Northern blot hybridization; putative" CDS <1..908 /note="partial ORF; putative" /codon_start=3 /protein_id="AAB59573.1" /translation="AQLNVTENECQNYKRCLEILEQMNEDDSEQLQMELKELALEEER LIQELEDVEKNRKIVAENLEKVQAEAERLDQEEAQYQREYSEFKRQQLELDDELKSVE NQMRYAQTQLDKLKKTNVFNATFHIWHSGQFGTINNFRLGRLPSVPVEWNEINAAWGQ TVLLLHALANKMGLKFQRYRLVPYGNHSYLESLTDKSKELPLYCSGGLRFFWDNKFDH AMVAFLDCVQQFKEEVEKGETRFCLPYRMDVEKGKIEDTGGSGGSYSIKTQFNSEEQW TKALKFMLTNLKWGLAWVSSQFYNK" variation 763 /note="different isolated cDNA clones have either a 'T' or 'C' at that position; that changes the potential codon from 'ATT' (Ile) to 'ACT' (Thr)" /replace="c" 3'UTR 909..1527 /note="putative" variation 1177 /note="different isolated cDNA clones have either an 'A' or 'T' at that position" /replace="t" variation 1290 /note="different isolated cDNA clones have either a 'T' or 'A' at that position" /replace="a" variation 1478 /note="different isolated cDNA clones have either an 'A' or 'G' at that position" /replace="g" regulatory 1505..1510 /regulatory_class="polyA_signal_sequence" /note="putative" polyA_site 1527 /note="putative" BASE COUNT 445 a 276 c 365 g 441 t ORIGIN 1 cggctcagct caacgtcact gaaaatgagt gtcagaacta caaacgctgt ttggagatct 61 tagagcaaat gaatgaggat gacagtgaac agttacagat ggagctaaag gagctggcac 121 tagaggagga gaggctgatc caggagctgg aagacgtgga aaagaaccgc aagatagtgg 181 cagaaaatct cgagaaggtc caggctgagg ctgagagact ggatcaggag gaagctcagt 241 atcagagaga atacagtgaa tttaaacgac agcagctgga gctggatgat gagctgaaga 301 gtgttgaaaa ccagatgcgt tatgcccaga cgcagctgga taagctgaag aaaaccaacg 361 tctttaatgc aaccttccac atctggcaca gtggacagtt tggcacaatc aataacttca 421 ggctgggtcg cctgcccagt gttcccgtgg aatggaatga gattaatgct gcttggggcc 481 agactgtgtt gctgctccat gctctggcca ataagatggg tctgaaattt cagagatacc 541 gacttgttcc ttacggaaac cattcatatc tggagtctct gacagacaag tctaaggagc 601 tgccgttata ctgttctggg gggttgcggt ttttctggga caacaagttt gaccatgcaa 661 tggtggcttt cctggactgt gtgcagcagt tcaaagaaga ggttgagaaa ggcgagacac 721 gtttttgtct tccctacagg atggatgtgg agaaaggcaa gattgaagac acaggaggca 781 gtggcggctc ctattccatc aaaacccagt ttaactctga ggagcagtgg acaaaagctc 841 tcaagttcat gctgacgaat cttaagtggg gtcttgcttg ggtgtcctca caattttata 901 acaaatgact tttttcctta gggggaggtt tgccttaaag gcttttaatt ttgttttgtt 961 tgcaaacatg ttttaaatta aattcgggta atattaaaca gtacatgttt acaataccaa 1021 aaaagaaaaa atccacaaaa gccactttat tttaaaatat catgtgacag atactttcca 1081 gagctacaac atgccatcta tagttgccag ccctggtcag ttttgattct taaccccatg 1141 gactcctttc cctttcttct ctgaaaaaaa ctaattaaaa tttgcttttc ttttttttaa 1201 ctgagttgaa ttgagattga tgtgttttca ctggattttt atctctctca acttcctgca 1261 cttaacaata tgaaatagaa acttttgtct ttactgagat gaggatatgt ttgagatgca 1321 cagttggata atgtgggaaa atgacatcta agctttacct ggtcaccatg tgatgtgatc 1381 agatgcttga aatttaacac ttttcacttg gttcttatac tgaatgccga ctctgctctg 1441 tgttagagat atgaaatggt gtttgatact gtttgagaca ttatggagag atttaattat 1501 ttgtaataaa agatttgctg cagtctg //