LOCUS HUMMHDQAAE 681 bp mRNA linear HUM 14-MAR-1996 DEFINITION Human (clone 8) MHC class II HLA-DQ-DQA1*0104 mRNA, partial cds. ACCESSION L34086 VERSION L34086.1 KEYWORDS cell surface glycoprotein; class II gene; integral membrane protein; major histocompatibility complex. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 681) AUTHORS Yasunaga,S., Kimura,A., Hamaguchi,K., Ronningen,K.S. and Sasazuki,T. TITLE Different contribution of HLA-DR and -DQ genes in susceptibility and resistance to insulin-dependent diabetes mellitus (IDDM) JOURNAL Tissue Antigens 47 (1), 37-48 (1996) PUBMED 8929711 COMMENT Original source text: Homo sapiens cDNA to mRNA. FEATURES Location/Qualifiers source 1..681 /db_xref="H-InvDB:HIT000193131" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /map="6p21.3" /cell_line="Ek" /cell_type="B lymphoblastoid" gene 1..681 /gene="HLA-DQA1" CDS <1..>681 /gene="HLA-DQA1" /function="immune regulation" /note="allele DQA1*0104; putative" /codon_start=1 /product="MHC class II HLA-DQ-alpha chain" /protein_id="AAC41954.1" /db_xref="GDB:G00-120-638" /translation="EGIVADHVASCGVNLYQFYGPSGQYTHEFDGDEEFYVDLERKET AWRWPEFSKFGGFDPQGALRNMAVAKHNLNIMIKRYNSTAATNEVPEVTVFSKSPVTL GQPNTLICLVDNIFPPVVNITWLSNGQSVTEGVSETSFLSKSDHSFFKISYLTFLPSA DEIYDCKVEHWGLDQPLLKHWEPEIPAPMSELTETVVCTLGLSVGLVGIVVGTVFIIQ GLRSVGASR" exon <1..13 /gene="HLA-DQA1" /note="allele DQA1*0104; G00-120-638" /number=1 exon 14..262 /gene="HLA-DQA1" /note="allele DQA1*0104; G00-120-638" /number=2 exon 263..544 /gene="HLA-DQA1" /note="allele DQA1*0104; G00-120-638" /number=3 exon 545..>681 /gene="HLA-DQA1" /note="allele DQA1*0104; G00-120-638" /number=4 BASE COUNT 147 a 176 c 179 g 179 t ORIGIN 1 gaaggcattg tggctgacca cgttgcctct tgtggtgtaa acttgtacca gttttacggt 61 ccctctggcc agtacaccca tgaatttgat ggagatgagg agttctacgt ggacctggag 121 aggaaggaga ctgcctggcg gtggcctgag ttcagcaaat ttggaggttt tgacccgcag 181 ggtgcactga gaaacatggc tgtggcaaaa cacaacttga acatcatgat taaacgctac 241 aactctaccg ctgctaccaa tgaggttcct gaggtcacag tgttttccaa gtctcccgtg 301 acactgggtc agcccaacac cctcatttgt cttgtggaca acatctttcc tcctgtggtc 361 aacatcacat ggctgagcaa tgggcagtca gtcacagaag gtgtttctga gaccagcttc 421 ctctccaaga gtgatcattc cttcttcaag atcagttacc tcaccttcct cccttctgct 481 gatgagattt atgactgcaa ggtggagcac tggggcctgg accagcctct tctgaaacac 541 tgggagcctg agattccagc ccctatgtca gagctcacag agactgtggt ctgcaccctg 601 gggttgtctg tgggcctcgt gggcattgtg gtgggcactg tcttcatcat ccaaggcctg 661 cgttcagttg gtgcttccag a //