LOCUS HUMMHDQAAD 681 bp mRNA linear HUM 14-MAR-1996 DEFINITION Human (clone 73) MHC class II HLA-DQA1*0103 mRNA, partial cds. ACCESSION L34085 VERSION L34085.1 KEYWORDS cell surface glycoprotein; class II gene; integral membrane protein; major histocompatibility complex. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 681) AUTHORS Yasunaga,S., Kimura,A., Hamaguchi,K., Ronningen,K.S. and Sasazuki,T. TITLE Different contribution of HLA-DR and -DQ genes in susceptibility and resistance to insulin-dependent diabetes mellitus (IDDM) JOURNAL Tissue Antigens 47 (1), 37-48 (1996) PUBMED 8929711 COMMENT Original source text: Homo sapiens cDNA to mRNA. FEATURES Location/Qualifiers source 1..681 /db_xref="H-InvDB:HIT000193130" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /map="6p21.3" /cell_line="E418 1324" /cell_type="B lymphoblastoid" gene 1..681 /gene="HLA-DQA1" CDS <1..>681 /gene="HLA-DQA1" /function="immune regulation" /note="allele DQA1*0103; putative" /codon_start=1 /product="MHC class II HLA-DQ-alpha chain" /protein_id="AAC41953.1" /db_xref="GDB:G00-120-638" /translation="EDIVADHVASCGVNLYQFYGPSGQFTHEFDGDEQFYVDLEKKET AWRWPEFSKFGGFDPQGALRNMAVAKHNLNIMIKRYNSTAATNEVPEVTVFSKSPVTL GQPNTLICLVDNIFPPVVNITWLSNGHAVTEGVSETSFLSKSDHSFFKISYLTFLPSA DEIYDCKVEHWGLDQPLLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTVFIIQ GLRSVGASR" exon <1..13 /gene="HLA-DQA1" /note="allele DQA1*0103; G00-120-638" /number=1 exon 14..262 /gene="HLA-DQA1" /note="allele DQA1*0103; G00-120-638" /number=2 exon 263..544 /gene="HLA-DQA1" /note="allele DQA1*0103; G00-120-638" /number=3 exon 545..>681 /gene="HLA-DQA1" /note="allele DQA1*0103; G00-120-638" /number=4 BASE COUNT 147 a 177 c 177 g 180 t ORIGIN 1 gaagacattg tggctgacca tgttgcctct tgtggtgtaa acttgtacca gttttacggt 61 ccctctggcc agttcaccca tgaatttgat ggagatgagc agttctacgt ggacctggag 121 aagaaggaga ctgcctggcg gtggcctgag ttcagcaaat ttggaggttt tgacccgcag 181 ggtgcactga gaaacatggc tgtggcaaaa cacaacttga acatcatgat taaacgctac 241 aactctaccg ctgctaccaa tgaggttcct gaggtcacag tgttttccaa gtctcccgtg 301 acactgggtc agcccaacac cctcatctgt cttgtggaca acatctttcc tcctgtggtc 361 aacatcacat ggctgagcaa tgggcacgca gtcacagaag gtgtttctga gaccagcttc 421 ctctccaaga gtgatcattc cttcttcaag atcagttacc tcaccttcct cccttctgct 481 gatgagattt atgactgcaa ggtggagcac tggggcctgg accagcctct tctgaaacac 541 tgggagcctg agattccagc ccctatgtca gagctcacag agactgtggt ctgtgccctg 601 gggttgtctg tgggcctcgt gggcattgtg gtgggcactg tcttcatcat ccaaggcctg 661 cgttcagttg gtgcttccag a //